| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is ybgT [C]
Identifier: 120598191
GI number: 120598191
Start: 1555787
End: 1555903
Strand: Direct
Name: ybgT [C]
Synonym: Sputw3181_1368
Alternate gene names: 120598191
Gene position: 1555787-1555903 (Clockwise)
Preceding gene: 120598190
Following gene: 120598192
Centisome position: 33.04
GC content: 44.44
Gene sequence:
>117_bases ATGTGGTATTTTACGTGGATATTAGGGGTTTTGTTGGCCTGTTCTTTCGGGATTATCAATGCCCTGTGGCTTGAGAATAC AGAGAACATGGACAGATCGGCAGAAGATGCCGAGTAA
Upstream 100 bases:
>100_bases GGACTTACTTCAAAATGTTTGGCCGTATTGGCCGTAAACATATTGAAGATAACAAAGCCTCACTCTATTAATGTTTACGA AGAATTAAGGAGCATCTGCT
Downstream 100 bases:
>100_bases CGTCTAATTCAATTTAAAAAACCTCGCAAGCGCGAGGTTTTTTATTGGGTTTTATTAAGGTACATATCCTCGCTTGGGGC TAATACCAATCACATTAAAT
Product: cyd operon protein YbgT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 38; Mature: 38
Protein sequence:
>38_residues MWYFTWILGVLLACSFGIINALWLENTENMDRSAEDAE
Sequences:
>Translated_38_residues MWYFTWILGVLLACSFGIINALWLENTENMDRSAEDAE >Mature_38_residues MWYFTWILGVLLACSFGIINALWLENTENMDRSAEDAE
Specific function: Unknown
COG id: COG4890
COG function: function code S; Predicted outer membrane lipoprotein
Gene ontology:
Cell location: Transmembrane, Inner membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4424; Mature: 4424
Theoretical pI: Translated: 3.56; Mature: 3.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWYFTWILGVLLACSFGIINALWLENTENMDRSAEDAE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MWYFTWILGVLLACSFGIINALWLENTENMDRSAEDAE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA