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The map label for this gene is yfgL [H]

Identifier: 120598181

GI number: 120598181

Start: 1537646

End: 1538833

Strand: Direct

Name: yfgL [H]

Synonym: Sputw3181_1358

Alternate gene names: 120598181

Gene position: 1537646-1538833 (Clockwise)

Preceding gene: 120598180

Following gene: 120598182

Centisome position: 32.66

GC content: 45.96

Gene sequence:

>1188_bases
ATGAAGTCTTGGTGCAAAAACCTGTTAGCCGCTGGATTGAGTCTAGCGATGTTATCCGCCTGTTCATCGAGTGATGTTGA
AGAAGAGCCGGTAAGTGAGTTAACTGCAATTCAGGCAACGGTGTTCCCTGAAGTAAGTTGGAGCGCCTCTGTTGGTAGTG
GTGTGGGAGATTATTATTCTCGCCTTATGCCGGCAGTTCGTTACGGTAAAATTTTTGCCGCAGACCGTTACGGTAAAGTC
ATTGCGTTTGATGAAGCTACGGGTGACCGTGTTTGGACTAAAGATTTTAGCGAAGAGTTTCGTGATAACGCCTTAGCTAA
AAATAAAGGTGCTCGCATTGCCGCAGGTGTCACCGCTGCCCGTAATAAAGTCTTTGTGGGTGGTGAGAGTGGGCTGCTTG
CAGCACTGAATATCGAAGATGGCCAAGTATTGTGGCATATCGTTGCGGGTGGTGAGCTTTTATCAAAGCCAACGGTTGCT
GATGATGTGGTTGTGGTGAGTACGAGCTCCGGTTCACTCGAGGCTTTTAACGTCGATACTGGCGATAAGCTGTGGGTGTA
CAAGATGCAGTTGCCGAACCTGACGTTACGTGGCACAGGCTCTGCCGCCTATGAAGCGGGTGGTTTCTTTATTGGTACTG
CCGATGGCAAAGTGGCTGTTGTGGTGAAAAACAATGGTCAAGCCGCGTGGGAACAAGCGATTTATAATCCAACGGGCGGT
AACGAGTTTACGCGTATGGCCGACGTGGATATGACACCGCTTATTCTTGGTGATAATTTATATGCGGTTAGCTATAACGG
TAACTTAGTGTCGATGGAATTGCGTACGGGTCGCATAGTATGGACACGTAAGTATTCAAGCTTTAACGAATTAGCATCAG
CAGGATTAAGTTTGTTTTTAGTTGACGATCATAGTCGTATCTACTCAGTTGATAGACGAAATGGTTTAGAGCTATGGAGC
AACTCTGAGTTAACAAATCGAACATTAACCTCGCCTGCAGTTTATAAAGATTATTTAGTTGTCGGTGATTTCGAAGGTTA
TCTACACTTTATTGATCGCAGTACAGGGACGATTGTCGGTCGTATTCAAGTCGATAGCTCTGGATTATACAGTCAGCCAT
TAGTGGTGGATGATAAAATCTATGTTCAAGGTCGCAGCGGAAAGCTGGCTGTTGTAACACTTCCGTAG

Upstream 100 bases:

>100_bases
AAACGGCTTATCAAACCGCCATGGATAACGGTGGTGTGGTAACAAGCCCGGCACTTAAAATCAAACTTGATAACCTAAAT
CAGGCATAAGGGATCCCTTG

Downstream 100 bases:

>100_bases
TTAAAAGTGTTATCCTTGCAGAGCCCCTGGAAGTGTGTTCCGGGGGCTTTTTATTGAAAAGTTTTTTAGAGGCAAAATCA
TGATCCCTGTAGTGGCCCTT

Product: outer membrane protein assembly complex subunit YfgL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGSGVGDYYSRLMPAVRYGKIFAADRYGKV
IAFDEATGDRVWTKDFSEEFRDNALAKNKGARIAAGVTAARNKVFVGGESGLLAALNIEDGQVLWHIVAGGELLSKPTVA
DDVVVVSTSSGSLEAFNVDTGDKLWVYKMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG
NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIVWTRKYSSFNELASAGLSLFLVDDHSRIYSVDRRNGLELWS
NSELTNRTLTSPAVYKDYLVVGDFEGYLHFIDRSTGTIVGRIQVDSSGLYSQPLVVDDKIYVQGRSGKLAVVTLP

Sequences:

>Translated_395_residues
MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGSGVGDYYSRLMPAVRYGKIFAADRYGKV
IAFDEATGDRVWTKDFSEEFRDNALAKNKGARIAAGVTAARNKVFVGGESGLLAALNIEDGQVLWHIVAGGELLSKPTVA
DDVVVVSTSSGSLEAFNVDTGDKLWVYKMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG
NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIVWTRKYSSFNELASAGLSLFLVDDHSRIYSVDRRNGLELWS
NSELTNRTLTSPAVYKDYLVVGDFEGYLHFIDRSTGTIVGRIQVDSSGLYSQPLVVDDKIYVQGRSGKLAVVTLP
>Mature_395_residues
MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGSGVGDYYSRLMPAVRYGKIFAADRYGKV
IAFDEATGDRVWTKDFSEEFRDNALAKNKGARIAAGVTAARNKVFVGGESGLLAALNIEDGQVLWHIVAGGELLSKPTVA
DDVVVVSTSSGSLEAFNVDTGDKLWVYKMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG
NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIVWTRKYSSFNELASAGLSLFLVDDHSRIYSVDRRNGLELWS
NSELTNRTLTSPAVYKDYLVVGDFEGYLHFIDRSTGTIVGRIQVDSSGLYSQPLVVDDKIYVQGRSGKLAVVTLP

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=382, Percent_Identity=37.696335078534, Blast_Score=281, Evalue=5e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 42662; Mature: 42662

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGSGVGDYYS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCHHHHHH
RLMPAVRYGKIFAADRYGKVIAFDEATGDRVWTKDFSEEFRDNALAKNKGARIAAGVTAA
HHHHHHHHCEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHCCHHCCCCCEEEECEEEC
RNKVFVGGESGLLAALNIEDGQVLWHIVAGGELLSKPTVADDVVVVSTSSGSLEAFNVDT
CCEEEECCCCCEEEEEEECCCEEEEEEEECCHHHCCCCCCCCEEEEEECCCCEEEEECCC
GDKLWVYKMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG
CCEEEEEEEECCCEEEEECCCCCEECCCEEEECCCCEEEEEEECCCCHHHHHHCCCCCCC
NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIVWTRKYSSFNELASAGLSLFL
CCCEEEECCCCCEEEECCCEEEEEECCCEEEEEEECCEEEEEEECCCHHHHHHCCEEEEE
VDDHSRIYSVDRRNGLELWSNSELTNRTLTSPAVYKDYLVVGDFEGYLHFIDRSTGTIVG
EECCCEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEE
RIQVDSSGLYSQPLVVDDKIYVQGRSGKLAVVTLP
EEEECCCCCCCCCEEECCEEEEECCCCCEEEEECC
>Mature Secondary Structure
MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGSGVGDYYS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCHHHHHH
RLMPAVRYGKIFAADRYGKVIAFDEATGDRVWTKDFSEEFRDNALAKNKGARIAAGVTAA
HHHHHHHHCEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHCCHHCCCCCEEEECEEEC
RNKVFVGGESGLLAALNIEDGQVLWHIVAGGELLSKPTVADDVVVVSTSSGSLEAFNVDT
CCEEEECCCCCEEEEEEECCCEEEEEEEECCHHHCCCCCCCCEEEEEECCCCEEEEECCC
GDKLWVYKMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG
CCEEEEEEEECCCEEEEECCCCCEECCCEEEECCCCEEEEEEECCCCHHHHHHCCCCCCC
NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIVWTRKYSSFNELASAGLSLFL
CCCEEEECCCCCEEEECCCEEEEEECCCEEEEEEECCEEEEEEECCCHHHHHHCCEEEEE
VDDHSRIYSVDRRNGLELWSNSELTNRTLTSPAVYKDYLVVGDFEGYLHFIDRSTGTIVG
EECCCEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEE
RIQVDSSGLYSQPLVVDDKIYVQGRSGKLAVVTLP
EEEECCCCCCCCCEEECCEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]