| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is nemA [H]
Identifier: 120598115
GI number: 120598115
Start: 1474400
End: 1475467
Strand: Direct
Name: nemA [H]
Synonym: Sputw3181_1292
Alternate gene names: 120598115
Gene position: 1474400-1475467 (Clockwise)
Preceding gene: 120598113
Following gene: 120598117
Centisome position: 31.31
GC content: 46.91
Gene sequence:
>1068_bases ATGAGCATACAATCTTCACCCAATCGATTGGGAAACCTGTTTGAAACCTACCAGCTTAATGAAACCATTACTTTAAATAA CCGCATCTTAATGGCGCCGTTAACCCGTTGTATGGCAGATGCTGAACTTGTGCCTACCGCCGAAATGGTCGCTTACTATG CTCGCCGAGCTGATGCAGGATTGATCATCACCGAAGCCACTATTATCCGCCCAGATGGTCAAGGCTATCCCAATACTCCA GGTATTTTTACCCAGTCGCAAATTGCCGGTTGGCGCAAAGTGACCGATGCGGTACATGCCAAGGGCGGTAAAATTTTTGT GCAGCTATGGCACACGGGTCGAGTAGCGCATCCGCACTTTTTTGTTGGCGGAGATGTACTTGCCCCTTCTGCACAGAAGA TTGAAGGCTCTGTGCCAAGAATGCGTGAGCTAACCTATGTCACACCAAAACCAGCGACACTTGAAGATATTCAAGGATTA GTACGCGATTACGCAAAAGCCGCTGAAAATGCTATCGAAGCAGGATTTGATGGTGTGGAAATTCATGGTGCCAATGGCTA CTTGATTGATGCTTTCTTACACCATGACAGCAACCGTCGCACGGATGAATATGGTGGCACACCTGAAAAAATGTCGCGTT TTGCGCTTGAAGTCGTAGACGCGATCATTGCACGCATTGGTAAGGACAGAACGGGGTTACGCCTTTCTCCGGGAGCCTAT TTCAATATGGCGACCGATAGCCGCGATCGCGCCGTCTTCGACTACTTACTGCCAGAATTAGAAACGCGTGATATCGCTTT TGTGCATATTGGGATCTTTGATGACAGTATGGAATTTGACTATTTAGGTGGCCGAGCTTCTAGTTATGTGCGAGCACATT ATGGAAAAACTTTAGTAGGAGTAGGGAGTTATAGTGCTGAAACAGCAAGTGAGGCAATTGCGGCAGACAAGTTTGATTTG ATTGCTATTGGTCGCCCCTTTATTGCAAACCCTGACTATATCGCTCGTGTTCGTGATGGGCTTGAACTTGTCCCTTACAG CGATGAAATGCTGGCAACATTAGTATAA
Upstream 100 bases:
>100_bases ACGGATTCTACCTAGTTTTGAACAAACATTCAAAAATGAACTTGAATGTTCATTCAAATAATAATATCTTGAATGCACAT TCAAGAATAAGGCCGAAATA
Downstream 100 bases:
>100_bases ATTTTGTCCGTGAGAGTATTTAAAGACAAAGGGTTAGCCATTGGCCAACCCTTTTTTATCACTTCATTCTCGGCTTAAAA AGCTTAGACTTTAATCGGCT
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: N-ethylmaleimide reducing enzyme [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSIQSSPNRLGNLFETYQLNETITLNNRILMAPLTRCMADAELVPTAEMVAYYARRADAGLIITEATIIRPDGQGYPNTP GIFTQSQIAGWRKVTDAVHAKGGKIFVQLWHTGRVAHPHFFVGGDVLAPSAQKIEGSVPRMRELTYVTPKPATLEDIQGL VRDYAKAAENAIEAGFDGVEIHGANGYLIDAFLHHDSNRRTDEYGGTPEKMSRFALEVVDAIIARIGKDRTGLRLSPGAY FNMATDSRDRAVFDYLLPELETRDIAFVHIGIFDDSMEFDYLGGRASSYVRAHYGKTLVGVGSYSAETASEAIAADKFDL IAIGRPFIANPDYIARVRDGLELVPYSDEMLATLV
Sequences:
>Translated_355_residues MSIQSSPNRLGNLFETYQLNETITLNNRILMAPLTRCMADAELVPTAEMVAYYARRADAGLIITEATIIRPDGQGYPNTP GIFTQSQIAGWRKVTDAVHAKGGKIFVQLWHTGRVAHPHFFVGGDVLAPSAQKIEGSVPRMRELTYVTPKPATLEDIQGL VRDYAKAAENAIEAGFDGVEIHGANGYLIDAFLHHDSNRRTDEYGGTPEKMSRFALEVVDAIIARIGKDRTGLRLSPGAY FNMATDSRDRAVFDYLLPELETRDIAFVHIGIFDDSMEFDYLGGRASSYVRAHYGKTLVGVGSYSAETASEAIAADKFDL IAIGRPFIANPDYIARVRDGLELVPYSDEMLATLV >Mature_354_residues SIQSSPNRLGNLFETYQLNETITLNNRILMAPLTRCMADAELVPTAEMVAYYARRADAGLIITEATIIRPDGQGYPNTPG IFTQSQIAGWRKVTDAVHAKGGKIFVQLWHTGRVAHPHFFVGGDVLAPSAQKIEGSVPRMRELTYVTPKPATLEDIQGLV RDYAKAAENAIEAGFDGVEIHGANGYLIDAFLHHDSNRRTDEYGGTPEKMSRFALEVVDAIIARIGKDRTGLRLSPGAYF NMATDSRDRAVFDYLLPELETRDIAFVHIGIFDDSMEFDYLGGRASSYVRAHYGKTLVGVGSYSAETASEAIAADKFDLI AIGRPFIANPDYIARVRDGLELVPYSDEMLATLV
Specific function: Catalyzes the reduction of N-ethylmaleimide (NEM) to N- ethylsuccinimide [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=342, Percent_Identity=42.3976608187134, Blast_Score=243, Evalue=1e-65, Organism=Escherichia coli, GI1789463, Length=343, Percent_Identity=30.9037900874636, Blast_Score=123, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17559804, Length=376, Percent_Identity=26.8617021276596, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17565138, Length=345, Percent_Identity=27.536231884058, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17564188, Length=373, Percent_Identity=26.2734584450402, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI72001454, Length=348, Percent_Identity=26.7241379310345, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17559802, Length=351, Percent_Identity=28.2051282051282, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17540738, Length=359, Percent_Identity=25.3481894150418, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6325086, Length=375, Percent_Identity=37.6, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6321973, Length=366, Percent_Identity=36.6120218579235, Blast_Score=188, Evalue=9e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39056; Mature: 38924
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQSSPNRLGNLFETYQLNETITLNNRILMAPLTRCMADAELVPTAEMVAYYARRADAG CCCCCCCHHHHHHHHHEECCCEEEECCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHCCCC LIITEATIIRPDGQGYPNTPGIFTQSQIAGWRKVTDAVHAKGGKIFVQLWHTGRVAHPHF EEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEE FVGGDVLAPSAQKIEGSVPRMRELTYVTPKPATLEDIQGLVRDYAKAAENAIEAGFDGVE EECCCEECCCHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE IHGANGYLIDAFLHHDSNRRTDEYGGTPEKMSRFALEVVDAIIARIGKDRTGLRLSPGAY EECCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCE FNMATDSRDRAVFDYLLPELETRDIAFVHIGIFDDSMEFDYLGGRASSYVRAHYGKTLVG EEECCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEECCCCHHHHHHHHCCCEEEE VGSYSAETASEAIAADKFDLIAIGRPFIANPDYIARVRDGLELVPYSDEMLATLV ECCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCEECCCCHHHHHHCC >Mature Secondary Structure SIQSSPNRLGNLFETYQLNETITLNNRILMAPLTRCMADAELVPTAEMVAYYARRADAG CCCCCCHHHHHHHHHEECCCEEEECCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHCCCC LIITEATIIRPDGQGYPNTPGIFTQSQIAGWRKVTDAVHAKGGKIFVQLWHTGRVAHPHF EEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEE FVGGDVLAPSAQKIEGSVPRMRELTYVTPKPATLEDIQGLVRDYAKAAENAIEAGFDGVE EECCCEECCCHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE IHGANGYLIDAFLHHDSNRRTDEYGGTPEKMSRFALEVVDAIIARIGKDRTGLRLSPGAY EECCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCE FNMATDSRDRAVFDYLLPELETRDIAFVHIGIFDDSMEFDYLGGRASSYVRAHYGKTLVG EEECCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEECCCCHHHHHHHHCCCEEEE VGSYSAETASEAIAADKFDLIAIGRPFIANPDYIARVRDGLELVPYSDEMLATLV ECCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCEECCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9013822; 9278503 [H]