| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is rhlE [H]
Identifier: 120598117
GI number: 120598117
Start: 1478300
End: 1479541
Strand: Direct
Name: rhlE [H]
Synonym: Sputw3181_1294
Alternate gene names: 120598117
Gene position: 1478300-1479541 (Clockwise)
Preceding gene: 120598115
Following gene: 120598119
Centisome position: 31.4
GC content: 42.19
Gene sequence:
>1242_bases ATGTCTTTCAGTTCCTTATCTTTAAATACCACTCTAGTGAATACCATAACCGAACTGGGTTACTCGTTACCCACACCCAT TCAATCGGAAGCAATTCCAGTCATTTTAGCCAAACAAGATGTGATGGCCGGCGCACAGACAGGTACGGGTAAAACGGCTG CATTTGCACTCCCTATTTTGCATCTGCTTATGGCTAAAAATGTAGAACAGAAGGCTGAGAGGGTAAAAACCGTACAAGCA TTAGTGTTAGTACCAACACGTGAGTTAGCGGTACAAGTACATCAAAGCTTTGTTAAATATGCTAAAAATACAGATATTCG TATAGGTATAGCCTATGGCGGCGTGAGTATTGATGCGCAGGTCGATGTATTTAAAACAGGTATTGATGTGCTAATTGCAA CCCCAGGGCGATTGCTCGATCATCTTCGTCAAGGAGTATTAAACCTTAATCAACTCAGTACATTAGTTTTCGATGAAGCC GACCGTATGCTTGATATGGGGTTTATGGATGAAATTAATGCAGTGCTTAAACAAGTGCCTAAGGACAGACAAACGCTACT TTTTTCTGCCACCTTAGATGATGCGATATTTGAGTTGAGTAAATCTTTACTACGTGAGCCTAAATTAATCGAAGTGACTA AACGTAATACGACCGCAGCACAGGTTGAGCAACGAGTGTATGCCATTGATAGCGATCGTAAAACTGAGTTTGTTAGTCAC TTGATTCGTTCGAATTATTGGCACCAAGTGCTTATTTTTAGTCGTACTAAGCAAGGTGTTGATAGACTTGTACAGCAGTT AAATAAACTGAGTATTGTCACTCATGCCTTCCATGGTGATTTGTCCCAAGGCGCACGGGAAAAAGTATTACAAGCATTTA AACTGGGTAATATTCAGGTGTTAGTGGCCACCGATGTTGCTGCCCGAGGGCTAGATATTGTTGAATTAAAATATGTGATT AATTTTGAATTGCCCTTTATTGCTGAAGACTATATTCACCGTATCGGCCGTACGGGGCGAGCGGGGAGTGCAGGCCTTGC TATAACGCTGTTTAGCCAAGAAGATACATTATTACTAGAAGAAGTTGAAGTTGTGCTTGATAAGCGCTTGCCGCAACAAT GGTATCCCGGTTTTGAGCCAGATTTTAATAAGATGGAACCTGAACCCAGGCGTAACGGTAAAGCGGCACAAAAACAACGT GCCAAAAAACGCGCCTTCGGCAGTAAAAAGCCCTCTCGGTGA
Upstream 100 bases:
>100_bases TAATGTCGATTGCATTGGAGGAATGCTTTGCTTTTGCGTCTAGGCGCGACTATGTCGTATCTGCTAACATTAATGCCATG ATGTTATTTGGTGATTTCCA
Downstream 100 bases:
>100_bases GTCGCTATTGGATTAACACAGCCAAACAAGCCTTTAGGGACTCACTTGTGAGCACAATAGCCTTGGGGTTGGGCAATGGT TTATTTGCTAACCTCAGTAT
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSFSSLSLNTTLVNTITELGYSLPTPIQSEAIPVILAKQDVMAGAQTGTGKTAAFALPILHLLMAKNVEQKAERVKTVQA LVLVPTRELAVQVHQSFVKYAKNTDIRIGIAYGGVSIDAQVDVFKTGIDVLIATPGRLLDHLRQGVLNLNQLSTLVFDEA DRMLDMGFMDEINAVLKQVPKDRQTLLFSATLDDAIFELSKSLLREPKLIEVTKRNTTAAQVEQRVYAIDSDRKTEFVSH LIRSNYWHQVLIFSRTKQGVDRLVQQLNKLSIVTHAFHGDLSQGAREKVLQAFKLGNIQVLVATDVAARGLDIVELKYVI NFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDTLLLEEVEVVLDKRLPQQWYPGFEPDFNKMEPEPRRNGKAAQKQR AKKRAFGSKKPSR
Sequences:
>Translated_413_residues MSFSSLSLNTTLVNTITELGYSLPTPIQSEAIPVILAKQDVMAGAQTGTGKTAAFALPILHLLMAKNVEQKAERVKTVQA LVLVPTRELAVQVHQSFVKYAKNTDIRIGIAYGGVSIDAQVDVFKTGIDVLIATPGRLLDHLRQGVLNLNQLSTLVFDEA DRMLDMGFMDEINAVLKQVPKDRQTLLFSATLDDAIFELSKSLLREPKLIEVTKRNTTAAQVEQRVYAIDSDRKTEFVSH LIRSNYWHQVLIFSRTKQGVDRLVQQLNKLSIVTHAFHGDLSQGAREKVLQAFKLGNIQVLVATDVAARGLDIVELKYVI NFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDTLLLEEVEVVLDKRLPQQWYPGFEPDFNKMEPEPRRNGKAAQKQR AKKRAFGSKKPSR >Mature_412_residues SFSSLSLNTTLVNTITELGYSLPTPIQSEAIPVILAKQDVMAGAQTGTGKTAAFALPILHLLMAKNVEQKAERVKTVQAL VLVPTRELAVQVHQSFVKYAKNTDIRIGIAYGGVSIDAQVDVFKTGIDVLIATPGRLLDHLRQGVLNLNQLSTLVFDEAD RMLDMGFMDEINAVLKQVPKDRQTLLFSATLDDAIFELSKSLLREPKLIEVTKRNTTAAQVEQRVYAIDSDRKTEFVSHL IRSNYWHQVLIFSRTKQGVDRLVQQLNKLSIVTHAFHGDLSQGAREKVLQAFKLGNIQVLVATDVAARGLDIVELKYVIN FELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDTLLLEEVEVVLDKRLPQQWYPGFEPDFNKMEPEPRRNGKAAQKQRA KKRAFGSKKPSR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=395, Percent_Identity=38.9873417721519, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=40.1084010840108, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=40.1084010840108, Blast_Score=262, Evalue=3e-70, Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=40.1084010840108, Blast_Score=262, Evalue=5e-70, Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=39.0957446808511, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=39.0957446808511, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI20149629, Length=410, Percent_Identity=36.3414634146341, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI41327771, Length=392, Percent_Identity=35.2040816326531, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI262118318, Length=362, Percent_Identity=40.0552486187845, Blast_Score=252, Evalue=4e-67, Organism=Homo sapiens, GI216548263, Length=362, Percent_Identity=40.0552486187845, Blast_Score=252, Evalue=4e-67, Organism=Homo sapiens, GI13518015, Length=362, Percent_Identity=40.0552486187845, Blast_Score=251, Evalue=6e-67, Organism=Homo sapiens, GI262231852, Length=362, Percent_Identity=40.0552486187845, Blast_Score=251, Evalue=6e-67, Organism=Homo sapiens, GI222352149, Length=360, Percent_Identity=38.3333333333333, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI41327773, Length=361, Percent_Identity=36.2880886426593, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI45446747, Length=359, Percent_Identity=37.6044568245125, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI45446743, Length=359, Percent_Identity=37.6044568245125, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI148613856, Length=384, Percent_Identity=36.1979166666667, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI38201710, Length=384, Percent_Identity=36.1979166666667, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI31542656, Length=377, Percent_Identity=39.7877984084881, Blast_Score=241, Evalue=8e-64, Organism=Homo sapiens, GI4758138, Length=371, Percent_Identity=36.1185983827493, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=34.6368715083799, Blast_Score=228, Evalue=6e-60, Organism=Homo sapiens, GI7661920, Length=363, Percent_Identity=34.1597796143251, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI55749865, Length=362, Percent_Identity=36.1878453038674, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI50659095, Length=372, Percent_Identity=36.0215053763441, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI164664518, Length=362, Percent_Identity=33.7016574585635, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI188035877, Length=366, Percent_Identity=33.879781420765, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI41327776, Length=410, Percent_Identity=34.8780487804878, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI51094101, Length=371, Percent_Identity=34.2318059299191, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI164419743, Length=371, Percent_Identity=34.2318059299191, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI13129006, Length=372, Percent_Identity=33.8709677419355, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI13514831, Length=374, Percent_Identity=34.2245989304813, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI4503529, Length=366, Percent_Identity=34.4262295081967, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI41327779, Length=369, Percent_Identity=34.1463414634146, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI38569503, Length=372, Percent_Identity=33.0645161290323, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI38569505, Length=372, Percent_Identity=33.0645161290323, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI38327634, Length=389, Percent_Identity=33.6760925449871, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI83700235, Length=366, Percent_Identity=33.6065573770492, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI9506931, Length=405, Percent_Identity=32.3456790123457, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI4758112, Length=367, Percent_Identity=30.2452316076294, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI18375623, Length=367, Percent_Identity=30.2452316076294, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI21040371, Length=366, Percent_Identity=29.7814207650273, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI6005743, Length=383, Percent_Identity=30.2872062663185, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI8922886, Length=383, Percent_Identity=29.7650130548303, Blast_Score=171, Evalue=8e-43, Organism=Homo sapiens, GI164419732, Length=348, Percent_Identity=32.183908045977, Blast_Score=171, Evalue=8e-43, Organism=Homo sapiens, GI62241022, Length=366, Percent_Identity=30.327868852459, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI256223453, Length=369, Percent_Identity=26.5582655826558, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI9966805, Length=338, Percent_Identity=33.4319526627219, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=33.4328358208955, Blast_Score=158, Evalue=8e-39, Organism=Homo sapiens, GI154759257, Length=396, Percent_Identity=29.040404040404, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI62241024, Length=344, Percent_Identity=29.9418604651163, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI17505907, Length=217, Percent_Identity=40.0921658986175, Blast_Score=138, Evalue=8e-33, Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=40.0921658986175, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI256773275, Length=398, Percent_Identity=28.643216080402, Blast_Score=136, Evalue=4e-32, Organism=Escherichia coli, GI1787016, Length=388, Percent_Identity=51.0309278350515, Blast_Score=395, Evalue=1e-111, Organism=Escherichia coli, GI87082221, Length=379, Percent_Identity=38.2585751978892, Blast_Score=291, Evalue=4e-80, Organism=Escherichia coli, GI1790214, Length=375, Percent_Identity=37.3333333333333, Blast_Score=262, Evalue=3e-71, Organism=Escherichia coli, GI1787605, Length=358, Percent_Identity=42.7374301675978, Blast_Score=260, Evalue=1e-70, Organism=Escherichia coli, GI1788930, Length=382, Percent_Identity=37.17277486911, Blast_Score=227, Evalue=1e-60, Organism=Escherichia coli, GI48994977, Length=364, Percent_Identity=23.6263736263736, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=39.6174863387978, Blast_Score=267, Evalue=7e-72, Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=39.6174863387978, Blast_Score=267, Evalue=7e-72, Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=39.6174863387978, Blast_Score=267, Evalue=9e-72, Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=38.9920424403183, Blast_Score=261, Evalue=4e-70, Organism=Caenorhabditis elegans, GI17510559, Length=390, Percent_Identity=37.6923076923077, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI71995718, Length=398, Percent_Identity=37.4371859296482, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17555296, Length=413, Percent_Identity=34.1404358353511, Blast_Score=245, Evalue=4e-65, Organism=Caenorhabditis elegans, GI115533224, Length=353, Percent_Identity=37.6770538243626, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI86570094, Length=355, Percent_Identity=36.9014084507042, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI71995724, Length=363, Percent_Identity=34.7107438016529, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17507121, Length=363, Percent_Identity=34.435261707989, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17552642, Length=363, Percent_Identity=37.7410468319559, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17552114, Length=370, Percent_Identity=33.2432432432432, Blast_Score=228, Evalue=3e-60, Organism=Caenorhabditis elegans, GI71987143, Length=363, Percent_Identity=34.1597796143251, Blast_Score=226, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17507945, Length=363, Percent_Identity=36.3636363636364, Blast_Score=222, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17537549, Length=371, Percent_Identity=35.8490566037736, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI17507877, Length=399, Percent_Identity=34.0852130325814, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71999646, Length=370, Percent_Identity=35.1351351351351, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71999644, Length=370, Percent_Identity=35.1351351351351, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507879, Length=396, Percent_Identity=34.5959595959596, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=32.9758713136729, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=32.5396825396825, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=32.2751322751323, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=32.8083989501312, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI193208216, Length=407, Percent_Identity=33.1695331695332, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17505370, Length=362, Percent_Identity=33.1491712707182, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17509811, Length=366, Percent_Identity=30.327868852459, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI71982858, Length=358, Percent_Identity=28.7709497206704, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI193206561, Length=358, Percent_Identity=28.7709497206704, Blast_Score=167, Evalue=8e-42, Organism=Caenorhabditis elegans, GI17553716, Length=359, Percent_Identity=28.9693593314763, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI71990816, Length=378, Percent_Identity=30.4232804232804, Blast_Score=161, Evalue=5e-40, Organism=Caenorhabditis elegans, GI17507641, Length=384, Percent_Identity=32.5520833333333, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17556951, Length=344, Percent_Identity=31.1046511627907, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17536099, Length=382, Percent_Identity=29.3193717277487, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17536101, Length=382, Percent_Identity=29.5811518324607, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=32.8840970350404, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17536103, Length=384, Percent_Identity=29.4270833333333, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI25148203, Length=422, Percent_Identity=23.9336492890995, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71997889, Length=370, Percent_Identity=28.9189189189189, Blast_Score=127, Evalue=7e-30, Organism=Caenorhabditis elegans, GI25148291, Length=389, Percent_Identity=26.4781491002571, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71982862, Length=212, Percent_Identity=26.8867924528302, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI25148205, Length=344, Percent_Identity=23.2558139534884, Blast_Score=95, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17557982, Length=382, Percent_Identity=24.3455497382199, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71987152, Length=87, Percent_Identity=43.6781609195402, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17565430, Length=369, Percent_Identity=25.4742547425474, Blast_Score=87, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6325138, Length=435, Percent_Identity=36.0919540229885, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6321856, Length=374, Percent_Identity=40.1069518716578, Blast_Score=257, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6324778, Length=415, Percent_Identity=35.1807228915663, Blast_Score=249, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6324217, Length=363, Percent_Identity=37.465564738292, Blast_Score=244, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6321360, Length=366, Percent_Identity=38.5245901639344, Blast_Score=240, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6323021, Length=362, Percent_Identity=37.292817679558, Blast_Score=234, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=35.5191256830601, Blast_Score=226, Evalue=7e-60, Organism=Saccharomyces cerevisiae, GI6320173, Length=425, Percent_Identity=32.9411764705882, Blast_Score=220, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6320041, Length=362, Percent_Identity=34.2541436464088, Blast_Score=217, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6320449, Length=376, Percent_Identity=36.1702127659575, Blast_Score=210, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6323947, Length=357, Percent_Identity=35.0140056022409, Blast_Score=201, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=31.8681318681319, Blast_Score=189, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6322912, Length=362, Percent_Identity=32.3204419889503, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322323, Length=362, Percent_Identity=32.3204419889503, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6321963, Length=390, Percent_Identity=34.1025641025641, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6321111, Length=353, Percent_Identity=32.0113314447592, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6319714, Length=375, Percent_Identity=32.5333333333333, Blast_Score=183, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6320119, Length=385, Percent_Identity=29.0909090909091, Blast_Score=179, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6324620, Length=367, Percent_Identity=31.0626702997275, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=412, Percent_Identity=27.6699029126214, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=417, Percent_Identity=29.9760191846523, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=390, Percent_Identity=31.025641025641, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=418, Percent_Identity=28.9473684210526, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6322876, Length=454, Percent_Identity=29.0748898678414, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6324366, Length=359, Percent_Identity=27.2980501392758, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6321374, Length=420, Percent_Identity=23.3333333333333, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323844, Length=374, Percent_Identity=22.192513368984, Blast_Score=66, Evalue=8e-12, Organism=Drosophila melanogaster, GI21356161, Length=396, Percent_Identity=37.3737373737374, Blast_Score=265, Evalue=5e-71, Organism=Drosophila melanogaster, GI24585582, Length=371, Percent_Identity=39.3530997304582, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=39.2655367231638, Blast_Score=257, Evalue=9e-69, Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=37.9947229551451, Blast_Score=254, Evalue=5e-68, Organism=Drosophila melanogaster, GI24584994, Length=387, Percent_Identity=35.6589147286822, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI28574962, Length=349, Percent_Identity=38.3954154727794, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI24644479, Length=360, Percent_Identity=38.6111111111111, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24644483, Length=360, Percent_Identity=38.6111111111111, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24644487, Length=360, Percent_Identity=38.6111111111111, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI45551833, Length=360, Percent_Identity=38.6111111111111, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24644485, Length=360, Percent_Identity=38.6111111111111, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI281361218, Length=360, Percent_Identity=38.6111111111111, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24644481, Length=360, Percent_Identity=38.6111111111111, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI17977678, Length=395, Percent_Identity=34.4303797468354, Blast_Score=241, Evalue=5e-64, Organism=Drosophila melanogaster, GI24642151, Length=362, Percent_Identity=35.0828729281768, Blast_Score=238, Evalue=7e-63, Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=35.7340720221607, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI21355075, Length=361, Percent_Identity=36.5650969529086, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24583279, Length=361, Percent_Identity=35.7340720221607, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI28575014, Length=371, Percent_Identity=36.1185983827493, Blast_Score=231, Evalue=9e-61, Organism=Drosophila melanogaster, GI24662330, Length=357, Percent_Identity=35.5742296918768, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI18857967, Length=380, Percent_Identity=35.2631578947368, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI24645031, Length=363, Percent_Identity=33.3333333333333, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI17136814, Length=382, Percent_Identity=36.1256544502618, Blast_Score=214, Evalue=8e-56, Organism=Drosophila melanogaster, GI24582080, Length=363, Percent_Identity=34.435261707989, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI24582078, Length=363, Percent_Identity=34.435261707989, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI17136248, Length=363, Percent_Identity=34.435261707989, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI24582075, Length=363, Percent_Identity=34.435261707989, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=35.7594936708861, Blast_Score=194, Evalue=8e-50, Organism=Drosophila melanogaster, GI28571808, Length=366, Percent_Identity=31.9672131147541, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI28571809, Length=366, Percent_Identity=31.9672131147541, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI20130173, Length=435, Percent_Identity=28.9655172413793, Blast_Score=181, Evalue=6e-46, Organism=Drosophila melanogaster, GI21355559, Length=375, Percent_Identity=33.0666666666667, Blast_Score=181, Evalue=9e-46, Organism=Drosophila melanogaster, GI24666101, Length=354, Percent_Identity=32.4858757062147, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24642822, Length=383, Percent_Identity=30.2872062663185, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI24581954, Length=379, Percent_Identity=29.5514511873351, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI24581952, Length=379, Percent_Identity=29.5514511873351, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI24581956, Length=379, Percent_Identity=29.5514511873351, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI17647335, Length=384, Percent_Identity=29.6875, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI17136666, Length=472, Percent_Identity=28.6016949152542, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI19920478, Length=350, Percent_Identity=29.7142857142857, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=29.7546012269939, Blast_Score=141, Evalue=9e-34, Organism=Drosophila melanogaster, GI24643725, Length=397, Percent_Identity=26.448362720403, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24640164, Length=374, Percent_Identity=24.5989304812834, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI18859659, Length=209, Percent_Identity=35.8851674641148, Blast_Score=118, Evalue=8e-27, Organism=Drosophila melanogaster, GI28571338, Length=209, Percent_Identity=35.8851674641148, Blast_Score=118, Evalue=8e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 46087; Mature: 45956
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSSLSLNTTLVNTITELGYSLPTPIQSEAIPVILAKQDVMAGAQTGTGKTAAFALPIL CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHH HLLMAKNVEQKAERVKTVQALVLVPTRELAVQVHQSFVKYAKNTDIRIGIAYGGVSIDAQ HHHHHCCHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCC VDVFKTGIDVLIATPGRLLDHLRQGVLNLNQLSTLVFDEADRMLDMGFMDEINAVLKQVP HHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC KDRQTLLFSATLDDAIFELSKSLLREPKLIEVTKRNTTAAQVEQRVYAIDSDRKTEFVSH CCHHEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHH LIRSNYWHQVLIFSRTKQGVDRLVQQLNKLSIVTHAFHGDLSQGAREKVLQAFKLGNIQV HHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEE LVATDVAARGLDIVELKYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDTLLLE EEEECHHHCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHH EVEVVLDKRLPQQWYPGFEPDFNKMEPEPRRNGKAAQKQRAKKRAFGSKKPSR HHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SFSSLSLNTTLVNTITELGYSLPTPIQSEAIPVILAKQDVMAGAQTGTGKTAAFALPIL CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHH HLLMAKNVEQKAERVKTVQALVLVPTRELAVQVHQSFVKYAKNTDIRIGIAYGGVSIDAQ HHHHHCCHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCC VDVFKTGIDVLIATPGRLLDHLRQGVLNLNQLSTLVFDEADRMLDMGFMDEINAVLKQVP HHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC KDRQTLLFSATLDDAIFELSKSLLREPKLIEVTKRNTTAAQVEQRVYAIDSDRKTEFVSH CCHHEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHH LIRSNYWHQVLIFSRTKQGVDRLVQQLNKLSIVTHAFHGDLSQGAREKVLQAFKLGNIQV HHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEE LVATDVAARGLDIVELKYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDTLLLE EEEECHHHCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHH EVEVVLDKRLPQQWYPGFEPDFNKMEPEPRRNGKAAQKQRAKKRAFGSKKPSR HHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]