Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

Click here to switch to the map view.

The map label for this gene is recX [H]

Identifier: 120598089

GI number: 120598089

Start: 1440102

End: 1440515

Strand: Direct

Name: recX [H]

Synonym: Sputw3181_1266

Alternate gene names: 120598089

Gene position: 1440102-1440515 (Clockwise)

Preceding gene: 120598088

Following gene: 120598090

Centisome position: 30.59

GC content: 44.44

Gene sequence:

>414_bases
TTGCTCGATAAAGGTTTCGAACTAAACGATATAGAACCTGTACTCGATGCTTGCGAATCCTCCGGTTTTATTAATGATGC
TCGTTATGCCGAACTGTTGGTGCGAAGCCACATCAGTCGAGGCCACGGTGCAATACGCATCCGCCAAGCAATCGCACAGA
AAGGCTTATCTAAAGACTGTATTGAAGCCGCTTTGGTTAATTGTGATTGTGACTGGTTTGAGCTAGCAAAAGATAAAGCC
ACCAAAAAATACGGCATTCCCCGTGTGACAGAAGTGAAGGGCTCTAAAGCTCGGGATCTCATCGCAAAGGAAAAGGCCAA
ACGAGTGCGTTTTTTAATGGGCCAAGGCTTTAGCTACGATCAAATCAGTTATGCATTAGATTCAGATCCCAATGATCTCG
ACGAAGATGATTAA

Upstream 100 bases:

>100_bases
ACTTAGAGACAGGCGAAATATTCTGAGTCAGTCCGCATACCAAATCGCGGTAGCGCTGCTAGCGCGCCGCGATTATTCCC
GCCAACAAATTCGTGATAAA

Downstream 100 bases:

>100_bases
CGCCCTAATTTAAAAGTGATGATTTGAAGCTAAGGCTGTAAACACTCATCTACTTATCACCTACGGGCTTTGAAGCCTTC
TGGTTTCTCGTTGTGCTCAC

Product: regulatory protein RecX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLDKGFELNDIEPVLDACESSGFINDARYAELLVRSHISRGHGAIRIRQAIAQKGLSKDCIEAALVNCDCDWFELAKDKA
TKKYGIPRVTEVKGSKARDLIAKEKAKRVRFLMGQGFSYDQISYALDSDPNDLDEDD

Sequences:

>Translated_137_residues
MLDKGFELNDIEPVLDACESSGFINDARYAELLVRSHISRGHGAIRIRQAIAQKGLSKDCIEAALVNCDCDWFELAKDKA
TKKYGIPRVTEVKGSKARDLIAKEKAKRVRFLMGQGFSYDQISYALDSDPNDLDEDD
>Mature_137_residues
MLDKGFELNDIEPVLDACESSGFINDARYAELLVRSHISRGHGAIRIRQAIAQKGLSKDCIEAALVNCDCDWFELAKDKA
TKKYGIPRVTEVKGSKARDLIAKEKAKRVRFLMGQGFSYDQISYALDSDPNDLDEDD

Specific function: Modulates recA activity [H]

COG id: COG2137

COG function: function code R; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recX family [H]

Homologues:

Organism=Escherichia coli, GI1789050, Length=114, Percent_Identity=36.8421052631579, Blast_Score=83, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003783 [H]

Pfam domain/function: PF02631 RecX [H]

EC number: NA

Molecular weight: Translated: 15328; Mature: 15328

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKGFELNDIEPVLDACESSGFINDARYAELLVRSHISRGHGAIRIRQAIAQKGLSKDC
CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHH
IEAALVNCDCDWFELAKDKATKKYGIPRVTEVKGSKARDLIAKEKAKRVRFLMGQGFSYD
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
QISYALDSDPNDLDEDD
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLDKGFELNDIEPVLDACESSGFINDARYAELLVRSHISRGHGAIRIRQAIAQKGLSKDC
CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHH
IEAALVNCDCDWFELAKDKATKKYGIPRVTEVKGSKARDLIAKEKAKRVRFLMGQGFSYD
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
QISYALDSDPNDLDEDD
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]