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The map label for this gene is traF [H]

Identifier: 120597996

GI number: 120597996

Start: 1323458

End: 1324402

Strand: Direct

Name: traF [H]

Synonym: Sputw3181_1173

Alternate gene names: 120597996

Gene position: 1323458-1324402 (Clockwise)

Preceding gene: 120597995

Following gene: 120597997

Centisome position: 28.11

GC content: 48.99

Gene sequence:

>945_bases
ATGAGAACGCCTTTGTTACCTTGGTTTATCCTATGGGTGACCATCCCAATCATTATTTTCTTTCTATTCATCTTACCCGC
CTATGCCAGTGACGAGCCATTCTATCAGCGTGGTCAGGAAGGCTGGTTTTGGTATCAGGTCATTCCTGGGCCAGCGGAGG
CTGAAGAGCTTATTAAGCCGGAATCTGGTGCGGCAGAGTCGAGTAAGAGCGGGCTAAAGCCTTTCAGTGCTGCCTGGTTT
CGTGAGCACATGCAGTCGTTCATGGACAAGGCAATTGATGAGCCGACGAATGAGAACGTCAGAGCCTATCTGTATCTCCA
GCGCGTCATGATGGATAAGGGCTCACAGTTTGCTGATGTTAGTCAGCAGGTAGTCATGGGCGATCCAGTTTTGGATGAAA
TCAGTCGCAGACCCTTGGCTACCTATGCTGCCAATCGGATGGATCGAGAAGCTGGCGCTCAACGAGATATTGCTTTAGGT
GAAGTAGCAAAACGGGCTGGCTTATTCTTCTTCTATCGTTCTGATTGCCCTTACTGCCATGCTCAAGCGCCTATCATCGA
ATCAATGGCTTTGAACTATGGTTTCGAGGTGTTTGCTATTGCAGTCGATGGCTTGCCTTTACCTGGTGGAGAGTTTCCTC
ATTACAAAGTCGATTCAGGACAAGCCCAATCCTTGTCCGTTACGACTGTTCCAGCGGTCTTCTTAGTAGACCCGCCTAAT
GTCATCACTCCGATTGGCCAAGGTGCAATGAGCCTCGATGAGCTCAATAATCGAATCATTCTCGCAGCCCATCAAGCCGG
TTGGATTGACGATCAAACTTACTATGCCACCAGACCTGTTCAACCCGGCGTGTCACTCGCGATGTCAGCGCAAGAGCTTA
ACGAAAAAATATTACAGGACCCTGAGTTTCTTGTTCGCTATCTGCGTGCACAAGGAGGGTTATAA

Upstream 100 bases:

>100_bases
ACAGCTAGTCAGAAACACACACGATTTCTTCATCTATCTGGCCAATCACCTTAACGGCGTTCCTTAGCATGTTAGCTCTA
TGAAATTTCTGGAGCTGACA

Downstream 100 bases:

>100_bases
CGATGAAAAAAGTATTCCGAGTATCGCTTATCGCCTGTGCGATTGGTTTTTCATCTATGAGCCAAGCAAGCTTGCAACAG
GAGATGAATCAGTTGTTTGG

Product: sex pilus assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRTPLLPWFILWVTIPIIIFFLFILPAYASDEPFYQRGQEGWFWYQVIPGPAEAEELIKPESGAAESSKSGLKPFSAAWF
REHMQSFMDKAIDEPTNENVRAYLYLQRVMMDKGSQFADVSQQVVMGDPVLDEISRRPLATYAANRMDREAGAQRDIALG
EVAKRAGLFFFYRSDCPYCHAQAPIIESMALNYGFEVFAIAVDGLPLPGGEFPHYKVDSGQAQSLSVTTVPAVFLVDPPN
VITPIGQGAMSLDELNNRIILAAHQAGWIDDQTYYATRPVQPGVSLAMSAQELNEKILQDPEFLVRYLRAQGGL

Sequences:

>Translated_314_residues
MRTPLLPWFILWVTIPIIIFFLFILPAYASDEPFYQRGQEGWFWYQVIPGPAEAEELIKPESGAAESSKSGLKPFSAAWF
REHMQSFMDKAIDEPTNENVRAYLYLQRVMMDKGSQFADVSQQVVMGDPVLDEISRRPLATYAANRMDREAGAQRDIALG
EVAKRAGLFFFYRSDCPYCHAQAPIIESMALNYGFEVFAIAVDGLPLPGGEFPHYKVDSGQAQSLSVTTVPAVFLVDPPN
VITPIGQGAMSLDELNNRIILAAHQAGWIDDQTYYATRPVQPGVSLAMSAQELNEKILQDPEFLVRYLRAQGGL
>Mature_314_residues
MRTPLLPWFILWVTIPIIIFFLFILPAYASDEPFYQRGQEGWFWYQVIPGPAEAEELIKPESGAAESSKSGLKPFSAAWF
REHMQSFMDKAIDEPTNENVRAYLYLQRVMMDKGSQFADVSQQVVMGDPVLDEISRRPLATYAANRMDREAGAQRDIALG
EVAKRAGLFFFYRSDCPYCHAQAPIIESMALNYGFEVFAIAVDGLPLPGGEFPHYKVDSGQAQSLSVTTVPAVFLVDPPN
VITPIGQGAMSLDELNNRIILAAHQAGWIDDQTYYATRPVQPGVSLAMSAQELNEKILQDPEFLVRYLRAQGGL

Specific function: Involved in F pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014110 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35107; Mature: 35107

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPLLPWFILWVTIPIIIFFLFILPAYASDEPFYQRGQEGWFWYQVIPGPAEAEELIKP
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHCC
ESGAAESSKSGLKPFSAAWFREHMQSFMDKAIDEPTNENVRAYLYLQRVMMDKGSQFADV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHH
SQQVVMGDPVLDEISRRPLATYAANRMDREAGAQRDIALGEVAKRAGLFFFYRSDCPYCH
HHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCCCC
AQAPIIESMALNYGFEVFAIAVDGLPLPGGEFPHYKVDSGQAQSLSVTTVPAVFLVDPPN
CCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEECCCCCCCEEEEEEEEEEEEECCCC
VITPIGQGAMSLDELNNRIILAAHQAGWIDDQTYYATRPVQPGVSLAMSAQELNEKILQD
CCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCC
PEFLVRYLRAQGGL
HHHHHHHHHHCCCC
>Mature Secondary Structure
MRTPLLPWFILWVTIPIIIFFLFILPAYASDEPFYQRGQEGWFWYQVIPGPAEAEELIKP
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHCC
ESGAAESSKSGLKPFSAAWFREHMQSFMDKAIDEPTNENVRAYLYLQRVMMDKGSQFADV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHH
SQQVVMGDPVLDEISRRPLATYAANRMDREAGAQRDIALGEVAKRAGLFFFYRSDCPYCH
HHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCCCC
AQAPIIESMALNYGFEVFAIAVDGLPLPGGEFPHYKVDSGQAQSLSVTTVPAVFLVDPPN
CCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEECCCCCCCEEEEEEEEEEEEECCCC
VITPIGQGAMSLDELNNRIILAAHQAGWIDDQTYYATRPVQPGVSLAMSAQELNEKILQD
CCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCC
PEFLVRYLRAQGGL
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3042757; 7915817; 1593622 [H]