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The map label for this gene is traH [H]

Identifier: 120597997

GI number: 120597997

Start: 1324405

End: 1325793

Strand: Direct

Name: traH [H]

Synonym: Sputw3181_1174

Alternate gene names: 120597997

Gene position: 1324405-1325793 (Clockwise)

Preceding gene: 120597996

Following gene: 120597998

Centisome position: 28.13

GC content: 47.37

Gene sequence:

>1389_bases
ATGAAAAAAGTATTCCGAGTATCGCTTATCGCCTGTGCGATTGGTTTTTCATCTATGAGCCAAGCAAGCTTGCAACAGGA
GATGAATCAGTTGTTTGGTTCAATGACCAACACCACTGCGCCTGGTGTATTCGAGAGTCAACGACGTGGCGTTATATCTG
GAGGAAGTGTTGTTGTTCGTAACAGGATCATGAATGAGAACCTCGTCTCTATGGTGCCACCGTCATTCCAAGCCGGTTGT
GGCGGCATTGATATGTTCGCTGGAAGTTTGTCATTTGTTAATGCTGATCAGTTCGTTCAATTGCTTCGCTCTGTGGCGGC
AAATGCCAAGGGATATGCATTCCAACTGGCGCTCAGCGCTATGTGTGAGAAATGCTCACAGCACATGGAGACTCTGCAAA
AGAAAATCCAGCAGTTGAACGAGTATTTTGGCAATTCCTGTCAAATGGCTCAGGGAGTCGTGAACGATACCTTGGCTGCT
TTTGGTAAGAAGGGGCAAACAGAAGCCAGCATGTTGAGCTCACTTAAAGGGGCTGGAGACGTTTTTACCAGTTGGAGTGA
GTCCAATGGTAAGAACCCTTATGAGAACGCTTCAAGTGTCGCGGCATCTGATGTGAACAAAACGATTAAAGGCAACTTGG
TTTGGCGAGCACTGAAACGTCACTCGGCATCAAGCTGGTTTGCATCGGGGGATGACCGTTTTCTTGAAGCGGTTATGTCA
GTGACTGGTTCGATCATTGTTGGTGATTTGGCTAATGCGGCTGATGGTCAAGGTAAAGCCCCAAAACTGACCAGACTGAA
TGGCAATAAAGTGACTATTGAGCATCTAATTCATGGCGGTAACGTCGCTATGTACCGATGTGACACAGTGACACAAGACG
GCTGTCTGAATCCGACAATCACTAACGTGACCCTAACCGGGTTATCAACCCAGGTAGAAAATTTACTGCTTGGTACAGGT
TCTAGTAACGGCATTATTTTTAAGTTTGCTCGAAATACTGGGGCAGCTAGCACCACCGAAAAGGCTTTTATGACCTCGGC
TCCTGCGAGCATTGGCGGCATGATTCGAACACTTTCTGCATTAAATGAAGGGGCTGCTAGGTCGTTTGCTTCAAGAGCTG
CGCCATTTATTGCTGTTGAGATGGCCCGAGCATTGGTTGAAGACATGCTCAATGCAGCTAGAAGTACCTCCGGTGTGGAA
GATCATGCCTATGCGAAGTTATTAACGGAAGACCTTGAACGTGCACGTCGCCAAATCAATGAGGAGTACGCTGCGTTGCA
GCGAAGATACGGCTCAGAGCAAGAATTGCTGGCGCATTTTAACCAGGTGATACAGACCATTCGCAAACAGCGTTATTACA
CCGTTAAATCTACGGCACTGGGGGAATAG

Upstream 100 bases:

>100_bases
GCGTGTCACTCGCGATGTCAGCGCAAGAGCTTAACGAAAAAATATTACAGGACCCTGAGTTTCTTGTTCGCTATCTGCGT
GCACAAGGAGGGTTATAACG

Downstream 100 bases:

>100_bases
GTCATGTGGGAGATCTATTCCATCGGGGATTCGGCATTTTTAGAGCAGGTCTTGAACGCTGTCGCGATGATTACTGGTAC
AGGCGACTTTACTTCAATGG

Product: TraH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKKVFRVSLIACAIGFSSMSQASLQQEMNQLFGSMTNTTAPGVFESQRRGVISGGSVVVRNRIMNENLVSMVPPSFQAGC
GGIDMFAGSLSFVNADQFVQLLRSVAANAKGYAFQLALSAMCEKCSQHMETLQKKIQQLNEYFGNSCQMAQGVVNDTLAA
FGKKGQTEASMLSSLKGAGDVFTSWSESNGKNPYENASSVAASDVNKTIKGNLVWRALKRHSASSWFASGDDRFLEAVMS
VTGSIIVGDLANAADGQGKAPKLTRLNGNKVTIEHLIHGGNVAMYRCDTVTQDGCLNPTITNVTLTGLSTQVENLLLGTG
SSNGIIFKFARNTGAASTTEKAFMTSAPASIGGMIRTLSALNEGAARSFASRAAPFIAVEMARALVEDMLNAARSTSGVE
DHAYAKLLTEDLERARRQINEEYAALQRRYGSEQELLAHFNQVIQTIRKQRYYTVKSTALGE

Sequences:

>Translated_462_residues
MKKVFRVSLIACAIGFSSMSQASLQQEMNQLFGSMTNTTAPGVFESQRRGVISGGSVVVRNRIMNENLVSMVPPSFQAGC
GGIDMFAGSLSFVNADQFVQLLRSVAANAKGYAFQLALSAMCEKCSQHMETLQKKIQQLNEYFGNSCQMAQGVVNDTLAA
FGKKGQTEASMLSSLKGAGDVFTSWSESNGKNPYENASSVAASDVNKTIKGNLVWRALKRHSASSWFASGDDRFLEAVMS
VTGSIIVGDLANAADGQGKAPKLTRLNGNKVTIEHLIHGGNVAMYRCDTVTQDGCLNPTITNVTLTGLSTQVENLLLGTG
SSNGIIFKFARNTGAASTTEKAFMTSAPASIGGMIRTLSALNEGAARSFASRAAPFIAVEMARALVEDMLNAARSTSGVE
DHAYAKLLTEDLERARRQINEEYAALQRRYGSEQELLAHFNQVIQTIRKQRYYTVKSTALGE
>Mature_462_residues
MKKVFRVSLIACAIGFSSMSQASLQQEMNQLFGSMTNTTAPGVFESQRRGVISGGSVVVRNRIMNENLVSMVPPSFQAGC
GGIDMFAGSLSFVNADQFVQLLRSVAANAKGYAFQLALSAMCEKCSQHMETLQKKIQQLNEYFGNSCQMAQGVVNDTLAA
FGKKGQTEASMLSSLKGAGDVFTSWSESNGKNPYENASSVAASDVNKTIKGNLVWRALKRHSASSWFASGDDRFLEAVMS
VTGSIIVGDLANAADGQGKAPKLTRLNGNKVTIEHLIHGGNVAMYRCDTVTQDGCLNPTITNVTLTGLSTQVENLLLGTG
SSNGIIFKFARNTGAASTTEKAFMTSAPASIGGMIRTLSALNEGAARSFASRAAPFIAVEMARALVEDMLNAARSTSGVE
DHAYAKLLTEDLERARRQINEEYAALQRRYGSEQELLAHFNQVIQTIRKQRYYTVKSTALGE

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 49640; Mature: 49640

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCEEEHHHCCCC
>Mature Secondary Structure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HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]