| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597987
Identifier: 120597987
GI number: 120597987
Start: 1313953
End: 1314363
Strand: Direct
Name: 120597987
Synonym: Sputw3181_1164
Alternate gene names: NA
Gene position: 1313953-1314363 (Clockwise)
Preceding gene: 120597986
Following gene: 120597993
Centisome position: 27.91
GC content: 44.04
Gene sequence:
>411_bases ATGAATAAAAAAATTAAACATGAGTACCAAATCAGTATGCGCTCAGCCATGGAGGCTGAACAAGTCAATGATTTAGACAA TGCGTTTAAGTCTCTTGAAAGAGCGCATATTTTAGGGCAGAGATATTTTATACCGCACATAGCGACGCACTGGCAGATGT TACGAATTGGGCTTAAACGCAATGATAATCGCGAGGTTATTGGTCAGATCGTCCGTTTGATAGCAACGGTTCCGGGTTTT ATATTTGGTTGGGTTCCAAGGGGAAATCCTGGAGGCGCGAATATCTCTGCTTTAAAGCCAGTGCCCTTGCCAGCTGACTT GCAACCCTTGCTAGCTGACAGCCCCATTTGGCGGGACGTCTTAATACGCCTGACTATTTACGCGGTTATCGTTTTAATCG TATTAGCATAA
Upstream 100 bases:
>100_bases TAAGCTTTAATTTAATAATCAGTGATATGCTTCGCGTCTCTTATTTAGCGATCGAGGATTGCTCTTTTCTTTCGCAGACT CATTATCTTAGTGATAGTAA
Downstream 100 bases:
>100_bases ACACCCATACTATTGCCAAAACGTTCTTCGCTGCAGCCCAATGCTGCAGCGAAGCAGGTTAATGATTATTCCGTTTGCTG TTTGCGGTTATCGTTTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MNKKIKHEYQISMRSAMEAEQVNDLDNAFKSLERAHILGQRYFIPHIATHWQMLRIGLKRNDNREVIGQIVRLIATVPGF IFGWVPRGNPGGANISALKPVPLPADLQPLLADSPIWRDVLIRLTIYAVIVLIVLA
Sequences:
>Translated_136_residues MNKKIKHEYQISMRSAMEAEQVNDLDNAFKSLERAHILGQRYFIPHIATHWQMLRIGLKRNDNREVIGQIVRLIATVPGF IFGWVPRGNPGGANISALKPVPLPADLQPLLADSPIWRDVLIRLTIYAVIVLIVLA >Mature_136_residues MNKKIKHEYQISMRSAMEAEQVNDLDNAFKSLERAHILGQRYFIPHIATHWQMLRIGLKRNDNREVIGQIVRLIATVPGF IFGWVPRGNPGGANISALKPVPLPADLQPLLADSPIWRDVLIRLTIYAVIVLIVLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15384; Mature: 15384
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKIKHEYQISMRSAMEAEQVNDLDNAFKSLERAHILGQRYFIPHIATHWQMLRIGLKR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NDNREVIGQIVRLIATVPGFIFGWVPRGNPGGANISALKPVPLPADLQPLLADSPIWRDV CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHH LIRLTIYAVIVLIVLA HHHHHHHHHHHHHHCC >Mature Secondary Structure MNKKIKHEYQISMRSAMEAEQVNDLDNAFKSLERAHILGQRYFIPHIATHWQMLRIGLKR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NDNREVIGQIVRLIATVPGFIFGWVPRGNPGGANISALKPVPLPADLQPLLADSPIWRDV CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHH LIRLTIYAVIVLIVLA HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA