Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597982

Identifier: 120597982

GI number: 120597982

Start: 1309041

End: 1310696

Strand: Direct

Name: 120597982

Synonym: Sputw3181_1159

Alternate gene names: NA

Gene position: 1309041-1310696 (Clockwise)

Preceding gene: 120597981

Following gene: 120597983

Centisome position: 27.8

GC content: 48.97

Gene sequence:

>1656_bases
ATGAATCATCCATTAAAAAACGCACTGCCAATCGTTGCCGCCGCTTATGGCGAAAAGTTTGGTGTGAAGGTGCTTATTCA
AGGACAAGATGCGTTTACCGATGGTGAGCGGATTGTGATCCCAACAGCAAACCCAGACGACCCACACTATCAACAGATAG
CTTGGGGTTATCTGGCTCATGAAGCGGCGCATATTCGGCATACCAATTTTGACATGGTGCAGAAGGCGTCGTCCAAGCCG
ATCCGTAAGGCACTTCTCAATATCATTGAGGACGTTCGCATTGAAAACGAATTGGCAAAGGATTACCCCGGAACCCGGCG
CAGTATTTCGCAAGTGATTGAGTACATGGTGGACACACAGCAAATGAGTGTACCTGAACAGCTTGATCCTGCATCTAACT
TGCAAGCCTGGTTGTTGTTCCGCTTGAGATGCCATTTTCTGGGTCAGAAAGCGCTGACACCTCTGTATCAAGCGGTTGAT
GAAAGAGTGAGACAACTCTTTCCTGCCGCAGCGATGAGCCGGTTAAGCGCCATGCTTACAGCAGTGCCTAGCCTGGCATC
TACAGGTGAAGTGCTAAAACTTGTCGATGCCATCGTTGCCATGTTGGAAGACGAATCTCGTCCACCACAGGATGAGTCGG
ATGCTGATAGCGGTAATGACATTGGACAAGATGCGAGTAATGACAGCAATAACAGTAGTGACAGTCAAATCCCTGAAACA
GACTCGTCTGCAACGGCGGATGTTGCTGAAACGGGGGATTCAGATAACTCTGATCAAGCTGACAATTTGCGACAAGCCTT
AGAGGCCAGTGCCGCTCAGTTTGAACCCGATACCTTTGCCCAAGTGGCAGAAGTGTTGTCGGAACAAGCTGAAGGACATC
AGGGCGTCACACCTCTCAGTTTGCCCCAAGCAGAGCAAGCTATGTTGGGTGATGAGGCCATCTTGACCTTATCGGCGTCT
GAGTCGGCTCAAATTCGAGCCCGACTTAGGGGCATGGTTCAGTCCAGTCAGGATAATCGGAATCATGCCAAACGGCACGG
TCTTCGAGTTGCAACTCATCGTCTTGCCGCTTCACAAGCAGGTGAGTCGAGATTGTTTATTCAAAGGCAACCTCGCATTG
CGCCCAATGCTGCTGTGCACTTGCTTGTCGATATATCGGGCTCAATGGGTAAGCCCATTGGCGAAGGTAATCGAAAGTAC
TTTCATGTTGCCAATGAAGCTGCTTTGGCTTTGGCCATGGCACTGGAAGGCATACCGGGTGTTGTACCTGCGGTCAGTTA
TTTTCCTGGTATTCATCAGGAAGTTTCTATCGCGTTATTGCCCAAGCAATCGGTTCGACATCGGGCCGCCTGTTTTGACC
AAAAACCACGAGGTTGTACGCCTATGGCACAAGCGATGTGGTTTGCGGCAAACAGTTTGTTAGCGCAAAAACAGAAGCGA
AAGCTAATGATAGTGCTAACGGATGGTGACCCAGATGATTGGGCTGCCACGCATGACATTGTTGACCGGTGCAGACGAAG
TGGCTTTGAGCTTCTGGGAATAGGGATTCAAACACGCAGTGTTGAGAAATTCTTTCCTCAAAGCATTGTGATTAACGATG
TCAAAGATCTGAAGCGTGAGTTATTCGAAGTAACACAACAACTGTTAATTCAGTAA

Upstream 100 bases:

>100_bases
CGACCTGGATAAGCTAAAAGCACAGGTTTAAACATCCATATTCCCAGCGGGGAAACGCTCCCGCTGAGGGAGTATTCCCC
CTAATGATTAGGAGACTCCC

Downstream 100 bases:

>100_bases
CCACATCAACTTTACCACCCTGCGGGGACGATTCCGTCCCCGTCAGGGCATGGGTTCGTCTCCGCTTTTTTTTGGAGACT
CCTATGAAAAACAAAAAGTT

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: Plasmid-Related Protein

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MNHPLKNALPIVAAAYGEKFGVKVLIQGQDAFTDGERIVIPTANPDDPHYQQIAWGYLAHEAAHIRHTNFDMVQKASSKP
IRKALLNIIEDVRIENELAKDYPGTRRSISQVIEYMVDTQQMSVPEQLDPASNLQAWLLFRLRCHFLGQKALTPLYQAVD
ERVRQLFPAAAMSRLSAMLTAVPSLASTGEVLKLVDAIVAMLEDESRPPQDESDADSGNDIGQDASNDSNNSSDSQIPET
DSSATADVAETGDSDNSDQADNLRQALEASAAQFEPDTFAQVAEVLSEQAEGHQGVTPLSLPQAEQAMLGDEAILTLSAS
ESAQIRARLRGMVQSSQDNRNHAKRHGLRVATHRLAASQAGESRLFIQRQPRIAPNAAVHLLVDISGSMGKPIGEGNRKY
FHVANEAALALAMALEGIPGVVPAVSYFPGIHQEVSIALLPKQSVRHRAACFDQKPRGCTPMAQAMWFAANSLLAQKQKR
KLMIVLTDGDPDDWAATHDIVDRCRRSGFELLGIGIQTRSVEKFFPQSIVINDVKDLKRELFEVTQQLLIQ

Sequences:

>Translated_551_residues
MNHPLKNALPIVAAAYGEKFGVKVLIQGQDAFTDGERIVIPTANPDDPHYQQIAWGYLAHEAAHIRHTNFDMVQKASSKP
IRKALLNIIEDVRIENELAKDYPGTRRSISQVIEYMVDTQQMSVPEQLDPASNLQAWLLFRLRCHFLGQKALTPLYQAVD
ERVRQLFPAAAMSRLSAMLTAVPSLASTGEVLKLVDAIVAMLEDESRPPQDESDADSGNDIGQDASNDSNNSSDSQIPET
DSSATADVAETGDSDNSDQADNLRQALEASAAQFEPDTFAQVAEVLSEQAEGHQGVTPLSLPQAEQAMLGDEAILTLSAS
ESAQIRARLRGMVQSSQDNRNHAKRHGLRVATHRLAASQAGESRLFIQRQPRIAPNAAVHLLVDISGSMGKPIGEGNRKY
FHVANEAALALAMALEGIPGVVPAVSYFPGIHQEVSIALLPKQSVRHRAACFDQKPRGCTPMAQAMWFAANSLLAQKQKR
KLMIVLTDGDPDDWAATHDIVDRCRRSGFELLGIGIQTRSVEKFFPQSIVINDVKDLKRELFEVTQQLLIQ
>Mature_551_residues
MNHPLKNALPIVAAAYGEKFGVKVLIQGQDAFTDGERIVIPTANPDDPHYQQIAWGYLAHEAAHIRHTNFDMVQKASSKP
IRKALLNIIEDVRIENELAKDYPGTRRSISQVIEYMVDTQQMSVPEQLDPASNLQAWLLFRLRCHFLGQKALTPLYQAVD
ERVRQLFPAAAMSRLSAMLTAVPSLASTGEVLKLVDAIVAMLEDESRPPQDESDADSGNDIGQDASNDSNNSSDSQIPET
DSSATADVAETGDSDNSDQADNLRQALEASAAQFEPDTFAQVAEVLSEQAEGHQGVTPLSLPQAEQAMLGDEAILTLSAS
ESAQIRARLRGMVQSSQDNRNHAKRHGLRVATHRLAASQAGESRLFIQRQPRIAPNAAVHLLVDISGSMGKPIGEGNRKY
FHVANEAALALAMALEGIPGVVPAVSYFPGIHQEVSIALLPKQSVRHRAACFDQKPRGCTPMAQAMWFAANSLLAQKQKR
KLMIVLTDGDPDDWAATHDIVDRCRRSGFELLGIGIQTRSVEKFFPQSIVINDVKDLKRELFEVTQQLLIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60352; Mature: 60352

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHPLKNALPIVAAAYGEKFGVKVLIQGQDAFTDGERIVIPTANPDDPHYQQIAWGYLAH
CCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
EAAHIRHTNFDMVQKASSKPIRKALLNIIEDVRIENELAKDYPGTRRSISQVIEYMVDTQ
HHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QMSVPEQLDPASNLQAWLLFRLRCHFLGQKALTPLYQAVDERVRQLFPAAAMSRLSAMLT
HHCCCHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVPSLASTGEVLKLVDAIVAMLEDESRPPQDESDADSGNDIGQDASNDSNNSSDSQIPET
HHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSSATADVAETGDSDNSDQADNLRQALEASAAQFEPDTFAQVAEVLSEQAEGHQGVTPLS
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
LPQAEQAMLGDEAILTLSASESAQIRARLRGMVQSSQDNRNHAKRHGLRVATHRLAASQA
CCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHC
GESRLFIQRQPRIAPNAAVHLLVDISGSMGKPIGEGNRKYFHVANEAALALAMALEGIPG
CCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCC
VVPAVSYFPGIHQEVSIALLPKQSVRHRAACFDQKPRGCTPMAQAMWFAANSLLAQKQKR
HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
KLMIVLTDGDPDDWAATHDIVDRCRRSGFELLGIGIQTRSVEKFFPQSIVINDVKDLKRE
CEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHH
LFEVTQQLLIQ
HHHHHHHHHCC
>Mature Secondary Structure
MNHPLKNALPIVAAAYGEKFGVKVLIQGQDAFTDGERIVIPTANPDDPHYQQIAWGYLAH
CCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
EAAHIRHTNFDMVQKASSKPIRKALLNIIEDVRIENELAKDYPGTRRSISQVIEYMVDTQ
HHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QMSVPEQLDPASNLQAWLLFRLRCHFLGQKALTPLYQAVDERVRQLFPAAAMSRLSAMLT
HHCCCHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVPSLASTGEVLKLVDAIVAMLEDESRPPQDESDADSGNDIGQDASNDSNNSSDSQIPET
HHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSSATADVAETGDSDNSDQADNLRQALEASAAQFEPDTFAQVAEVLSEQAEGHQGVTPLS
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
LPQAEQAMLGDEAILTLSASESAQIRARLRGMVQSSQDNRNHAKRHGLRVATHRLAASQA
CCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHC
GESRLFIQRQPRIAPNAAVHLLVDISGSMGKPIGEGNRKYFHVANEAALALAMALEGIPG
CCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCC
VVPAVSYFPGIHQEVSIALLPKQSVRHRAACFDQKPRGCTPMAQAMWFAANSLLAQKQKR
HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
KLMIVLTDGDPDDWAATHDIVDRCRRSGFELLGIGIQTRSVEKFFPQSIVINDVKDLKRE
CEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHH
LFEVTQQLLIQ
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA