Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597981

Identifier: 120597981

GI number: 120597981

Start: 1308531

End: 1308971

Strand: Direct

Name: 120597981

Synonym: Sputw3181_1158

Alternate gene names: NA

Gene position: 1308531-1308971 (Clockwise)

Preceding gene: 120597980

Following gene: 120597982

Centisome position: 27.79

GC content: 46.71

Gene sequence:

>441_bases
ATGCAATCAAGCATCCATAACCCCAGCCAACTGAACCAGTTTGAAGCACATTTTCGTGGTGTGACTGATGCGGTTGAAAG
TGAATCGATACCAGAAGTGGCGTGTTGTCGAACGTTAGTACAACGGTCGTACTCAACACATAGTGTCGTGATCCCCAAGA
ATCCTGTTTTGATCGCAGATGTGGACGCACAAGGAGCTTGGGTAACGGCCATGGTATTTGTTCCAAACATGGCATTGCAG
CAAACCGCTTTTGAGCGGGCCTGGCTGCAATATCAACACGAGGTGTCTACTCAGTTACAAGATCAGTACGGTCTGACATT
GGATGACATCCTGAGTTTAGACCAGCTTAAAACGTCATTTGAGCAGCACGAGAGTCCAGCTCAATTGGTGGCTTGGTTAG
GTCAAAAATACGACCTGGATAAGCTAAAAGCACAGGTTTAA

Upstream 100 bases:

>100_bases
AACATTGGTTCGACTGTACCAAACTCATTTTATTTCTAACGTCCTTGAGGGCATGTTGCCCTTAAGGGCGCATGTCCTCT
GAACTATGTAAGAGGAAATT

Downstream 100 bases:

>100_bases
ACATCCATATTCCCAGCGGGGAAACGCTCCCGCTGAGGGAGTATTCCCCCTAATGATTAGGAGACTCCCATGAATCATCC
ATTAAAAAACGCACTGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MQSSIHNPSQLNQFEAHFRGVTDAVESESIPEVACCRTLVQRSYSTHSVVIPKNPVLIADVDAQGAWVTAMVFVPNMALQ
QTAFERAWLQYQHEVSTQLQDQYGLTLDDILSLDQLKTSFEQHESPAQLVAWLGQKYDLDKLKAQV

Sequences:

>Translated_146_residues
MQSSIHNPSQLNQFEAHFRGVTDAVESESIPEVACCRTLVQRSYSTHSVVIPKNPVLIADVDAQGAWVTAMVFVPNMALQ
QTAFERAWLQYQHEVSTQLQDQYGLTLDDILSLDQLKTSFEQHESPAQLVAWLGQKYDLDKLKAQV
>Mature_146_residues
MQSSIHNPSQLNQFEAHFRGVTDAVESESIPEVACCRTLVQRSYSTHSVVIPKNPVLIADVDAQGAWVTAMVFVPNMALQ
QTAFERAWLQYQHEVSTQLQDQYGLTLDDILSLDQLKTSFEQHESPAQLVAWLGQKYDLDKLKAQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16460; Mature: 16460

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSIHNPSQLNQFEAHFRGVTDAVESESIPEVACCRTLVQRSYSTHSVVIPKNPVLIAD
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEE
VDAQGAWVTAMVFVPNMALQQTAFERAWLQYQHEVSTQLQDQYGLTLDDILSLDQLKTSF
CCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EQHESPAQLVAWLGQKYDLDKLKAQV
HHCCCHHHHHHHHCCCCCHHHHHHCC
>Mature Secondary Structure
MQSSIHNPSQLNQFEAHFRGVTDAVESESIPEVACCRTLVQRSYSTHSVVIPKNPVLIAD
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEE
VDAQGAWVTAMVFVPNMALQQTAFERAWLQYQHEVSTQLQDQYGLTLDDILSLDQLKTSF
CCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EQHESPAQLVAWLGQKYDLDKLKAQV
HHCCCHHHHHHHHCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA