Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597977

Identifier: 120597977

GI number: 120597977

Start: 1304464

End: 1305480

Strand: Direct

Name: 120597977

Synonym: Sputw3181_1154

Alternate gene names: NA

Gene position: 1304464-1305480 (Clockwise)

Preceding gene: 120597976

Following gene: 120597978

Centisome position: 27.71

GC content: 47.79

Gene sequence:

>1017_bases
ATGAAGGTTATCGACCTATCACAACGTACTCCTGCATGGCACCAGTGGCGCATTGCAGGGGTTACGGCATCTGAAGCCCC
AATTATTATGGGGCGTTCACCCTACAAAACACCTTGGCGATTATGGGCAGAAAAAACCGGATTCGTATTACCGGAAGACC
TGTCAAATAATCCTAATGTGCTTCGCGGTATACGGTTGGAGCCTCAAGCAAGGCGAGCATTTGAGAATGCGCATAATGAC
TTTCTTCTGCCGTTATGTGCTGAAGCTGATCATAACGCAATCTTTCGAGCCAGCTTTGATGGCATCAACGATGCGGGCGA
ACCCGTTGAACTGAAATGTCCTTGCCAGTCAGTTTTTGAGGATGTGCAAGCTCACAGAGAACAAAGCGAGGCGTACCAGT
TGTATTGGGTGCAAGTACAGCATCAAATACTGGTCGCCAATAGCACGCGTGGTTGGTTGGTATTCTATTTTGAGGATCAA
CTGATTGAGTTTGAAATACAACGAGACGCGGCGTTCTTAACTGAATTGCAAGAAACAGCGCTTCAGTTTTGGGAGTTAGT
ACAGACCAAAAAAGAACCGTCAAAATGCCCTGAACAAGATTGTTTTGTTCCCAAGGGTGAAGCCCAATACCGCTGGACAT
CGCTGTCTCGGCAGTATTGCTCAGCACATTCCGAAGTTGTCCGACTGGAAAATCACATTAAATCTTTGAAAGAGGAAATG
CGAGACGCCCAGTCAAAATTGGTCGCCATGATGGGTAACTACGCTCATGCCGACTATGCTGGGGTCAAACTCAGCCGCTA
CATGATGGCGGGCACGGTGGACTATAAGCAATTGGCCACCGATAAGTTAGGCGAGCTGGATGAACAGGTTTTAGCCGCTT
ACCGAAAAGCGCCACAAGAGCGGTTGCGCATTAGCACCAATAAGCCAGAGCAGCCCGTTGAAACACCAATCAAAATCAGT
CTTGAGCAAGATAACTTGGTTCTGCCAGGTGACTCGCCGAGCTCATTTTACTTTTAA

Upstream 100 bases:

>100_bases
TGTTCAGCACCAAACAGCGTTAGCGCAAGCTGCAAAGTAACCACTTAACCCTGAAGGGGAGTTCTCTCCTTCGGGGGAGT
CTCCCCTCAAAGGAGGCAAT

Downstream 100 bases:

>100_bases
CGTTCACTTGGAGCCGATTTCGGCTCCTTTCTCATGCGCTTACATCGAGTGCATCAGAAAGCAGTTTCACTCGTAGCCAA
TGCTGGGTACGAATGATAGA

Product: endonuclease-like phage-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MKVIDLSQRTPAWHQWRIAGVTASEAPIIMGRSPYKTPWRLWAEKTGFVLPEDLSNNPNVLRGIRLEPQARRAFENAHND
FLLPLCAEADHNAIFRASFDGINDAGEPVELKCPCQSVFEDVQAHREQSEAYQLYWVQVQHQILVANSTRGWLVFYFEDQ
LIEFEIQRDAAFLTELQETALQFWELVQTKKEPSKCPEQDCFVPKGEAQYRWTSLSRQYCSAHSEVVRLENHIKSLKEEM
RDAQSKLVAMMGNYAHADYAGVKLSRYMMAGTVDYKQLATDKLGELDEQVLAAYRKAPQERLRISTNKPEQPVETPIKIS
LEQDNLVLPGDSPSSFYF

Sequences:

>Translated_338_residues
MKVIDLSQRTPAWHQWRIAGVTASEAPIIMGRSPYKTPWRLWAEKTGFVLPEDLSNNPNVLRGIRLEPQARRAFENAHND
FLLPLCAEADHNAIFRASFDGINDAGEPVELKCPCQSVFEDVQAHREQSEAYQLYWVQVQHQILVANSTRGWLVFYFEDQ
LIEFEIQRDAAFLTELQETALQFWELVQTKKEPSKCPEQDCFVPKGEAQYRWTSLSRQYCSAHSEVVRLENHIKSLKEEM
RDAQSKLVAMMGNYAHADYAGVKLSRYMMAGTVDYKQLATDKLGELDEQVLAAYRKAPQERLRISTNKPEQPVETPIKIS
LEQDNLVLPGDSPSSFYF
>Mature_338_residues
MKVIDLSQRTPAWHQWRIAGVTASEAPIIMGRSPYKTPWRLWAEKTGFVLPEDLSNNPNVLRGIRLEPQARRAFENAHND
FLLPLCAEADHNAIFRASFDGINDAGEPVELKCPCQSVFEDVQAHREQSEAYQLYWVQVQHQILVANSTRGWLVFYFEDQ
LIEFEIQRDAAFLTELQETALQFWELVQTKKEPSKCPEQDCFVPKGEAQYRWTSLSRQYCSAHSEVVRLENHIKSLKEEM
RDAQSKLVAMMGNYAHADYAGVKLSRYMMAGTVDYKQLATDKLGELDEQVLAAYRKAPQERLRISTNKPEQPVETPIKIS
LEQDNLVLPGDSPSSFYF

Specific function: Unknown

COG id: COG5377

COG function: function code L; Phage-related protein, predicted endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38845; Mature: 38845

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIDLSQRTPAWHQWRIAGVTASEAPIIMGRSPYKTPWRLWAEKTGFVLPEDLSNNPNV
CCEEECCCCCCCCCEEEEEEECCCCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCE
LRGIRLEPQARRAFENAHNDFLLPLCAEADHNAIFRASFDGINDAGEPVELKCPCQSVFE
EEEECCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEECCHHHHHH
DVQAHREQSEAYQLYWVQVQHQILVANSTRGWLVFYFEDQLIEFEIQRDAAFLTELQETA
HHHHHHHHCCCEEEEEEEEEEEEEEEECCCCEEEEEEECCEEEEEEHHHHHHHHHHHHHH
LQFWELVQTKKEPSKCPEQDCFVPKGEAQYRWTSLSRQYCSAHSEVVRLENHIKSLKEEM
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDAQSKLVAMMGNYAHADYAGVKLSRYMMAGTVDYKQLATDKLGELDEQVLAAYRKAPQE
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
RLRISTNKPEQPVETPIKISLEQDNLVLPGDSPSSFYF
HEEECCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCC
>Mature Secondary Structure
MKVIDLSQRTPAWHQWRIAGVTASEAPIIMGRSPYKTPWRLWAEKTGFVLPEDLSNNPNV
CCEEECCCCCCCCCEEEEEEECCCCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCE
LRGIRLEPQARRAFENAHNDFLLPLCAEADHNAIFRASFDGINDAGEPVELKCPCQSVFE
EEEECCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEECCHHHHHH
DVQAHREQSEAYQLYWVQVQHQILVANSTRGWLVFYFEDQLIEFEIQRDAAFLTELQETA
HHHHHHHHCCCEEEEEEEEEEEEEEEECCCCEEEEEEECCEEEEEEHHHHHHHHHHHHHH
LQFWELVQTKKEPSKCPEQDCFVPKGEAQYRWTSLSRQYCSAHSEVVRLENHIKSLKEEM
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDAQSKLVAMMGNYAHADYAGVKLSRYMMAGTVDYKQLATDKLGELDEQVLAAYRKAPQE
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
RLRISTNKPEQPVETPIKISLEQDNLVLPGDSPSSFYF
HEEECCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA