Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597970

Identifier: 120597970

GI number: 120597970

Start: 1297895

End: 1300168

Strand: Direct

Name: 120597970

Synonym: Sputw3181_1147

Alternate gene names: NA

Gene position: 1297895-1300168 (Clockwise)

Preceding gene: 120597969

Following gene: 120597971

Centisome position: 27.57

GC content: 37.64

Gene sequence:

>2274_bases
ATGAAACACGATGAACTAAATGAGCGTTTAAGAACTTTCTTAATTTCAAGCCGAGAAAATGCGGGTTTGTCCCAAAGTGA
TGTTGCTGCAAGATCTGAGGTTTTTGGAATTGGAAGAACACTGGATCAACGGGCTGTTTCAAGAATTGAAAGTCAACCAA
TGAATGCTGATGCAATTAAGATTGCTGGGTATTTATCAGCTGTTGGGATTCAGCCAAGCAAGTATTATGAAATTTTAACG
GAATACACTTATAAAGAGGATGATTACATTATGTCAGAAGTTGGTGAGCAAACTATCAAAATTAAGGTAGAGGCAGCGAA
GTCGCTTATTTCATCAGTGAAAGATAGTATCGATTGCTACAATCATGAATATATCGATTCAATAGGGCTTAAAAGTAAGG
TTGAACAGCTTGAGGCTGTAGTAGATGGACTTAATAGAAAGCCTGTAATTGGATGTTTTGGTCATTTTGATGCAGGTAAG
TCAACACTGATTAACACTGTTATCAATCAGTCATTGCTCCCGACCAAATACCAACCAGCAACATGTGTTGTTAATCTTCT
TATGCACGAATCAGATAAGCCTGAAACAATTTCAGGAAATGTGGCTGTGTTTAAGAAGGGCTTTAAGCCGCATATGGTTC
ATTCACCAGTTGATGTCGAAAAATATTTAATTGAACAAGGTGGTTCAGAAATATTGGATAGATTAGGAGTACACAATCAT
GAAGATGATGTATTAAATGAGGCTTATATCGCAATTGTTTTTTCAGATTCCGAGATACTTCGTTCGGTTTGGTTGTTGGA
TACCCCAGGGGATCTTAACGGTTCAGATGAGTCTGATACTGAGAAGGCTCTCGGTGGTGTAGAACTTGCTGATGGTGTTG
TTTTTGTTTCAAATCATACCGGGTTTTTCAAAGATAGTGATTTAGGGTTTGCATCAAATATCATCAGGCAGAGACCACCA
GTGGATAAGGAGAAACCACTTGATCATTTAATGTTCATTCAGTCTCATTGTCACTCTGAAATAAGCAGGGATGATGTGGA
AGCTGTAGGTCGTGTAACCTTCAAGAGAATTAAAAAGCAACTAGATAATTTAATATTTTCATCATGGATGGAAGATGGAT
TTATTACGCAATTACCAGAAAGTTCAGAACTAACAGCACGAGTTCAACCATTTTGGCGTGAAAATAATGACTATCGTAGT
GATACATTGCGAAAAATCACCGAAATGGCTTCGTCTCTAACTTTGAACCAAGAATCAATAGTAGATAAGTATATTTCTAA
TATTCTAAAGAATATCGAAAATATGCTATTGAGTGAGATTGAAAATCTAAAAAACAAGAAATCGGAGACTTTCGAAAGAA
TTAAGGAGGTCAACGAGAAGGATGCGCGATTTCGTGAGTTGTCTACTCAGTTGATAAAAGATTTTAACTCTCTCATTGAA
TCATGTAATAGCCACAAAAAACACGACTTGGATGTTATTAGTACCTATTACAAATACAACACTTCTGTTGAAGGTCTCGA
AGAGCTTATCAATGACACCTATTCGGACAAGAAAGAGGCTCAATCTGAGTTAGGCAATTATATTGGTCAGCTTTTGACTA
CAAAATTAGAAAGCACATTAAAGACTAGTGGTAAAGCCGTATCGACGGAATTAGATTCTTTGTTGCTGAGATGGCAGGAA
GCTGCCCCCACAATCTCAACTACAGGAATTGATACCCAAATATCTGGATTGGGTGCAGAGTTTAGTGCATTTAACTCGAG
AGCGGCTTTTGTTGGAGGTCTTGCGGGATTAGGAAGTCTTGGAGCTATGGCATTATATGTATCGACTATAGCAAGTAATT
TAGGTGCATATATTTTAGTTGGAAAGGCAGCTGGAGTATTGGTGTCTTTAGGGTTGGTTGGAAGTGTTACTACAGTAACT
TCATTCGTTGCAGCCATCGGTGGTCCTATTACCATAGGTATTGCTCTTGCTGCGGCAATTGGTTACATAATATATCGACT
AGCTGGTGGTAGTTGGCAAAAATCACTCGCAAAAAAAGCCGCAGAAGCAATTCGTAAAGAGTCGGTGTTTGATGACATAG
AGAAAGCTGTAACTGAGTATTGGAATAGTACATCTAAGGCAATCAAAGCTGGTTTGGATGAGCTAATCATCAAAACTGAT
GAATATATTGAAAATTTAAAGGCTGATGCGAAAGTTGAATATGATATTGATGAAGTTGATGTATGTGTCTCACTTATCGA
TGACACGTTATTAATTCTTAAGTCTAGCGACTAA

Upstream 100 bases:

>100_bases
TGGAATGGTTGCCGGACTTGCAATTACTGCGGCAGCTCCATTGGCGATTGGTGCTGGAACTTACGGTATATACAAGTGGC
TGAAATCATAGGTCTGAAAA

Downstream 100 bases:

>100_bases
CTCTTGATGGGAGGTATTTATGGCTTGGTGGTTCGCTGCTCCTCTTGTTATATGGGGGGCAAAAAAAATATATGATGCTG
TTACTGAAGATGATGAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Containing Protein; Plasmid-Related Membrane Protein

Number of amino acids: Translated: 757; Mature: 757

Protein sequence:

>757_residues
MKHDELNERLRTFLISSRENAGLSQSDVAARSEVFGIGRTLDQRAVSRIESQPMNADAIKIAGYLSAVGIQPSKYYEILT
EYTYKEDDYIMSEVGEQTIKIKVEAAKSLISSVKDSIDCYNHEYIDSIGLKSKVEQLEAVVDGLNRKPVIGCFGHFDAGK
STLINTVINQSLLPTKYQPATCVVNLLMHESDKPETISGNVAVFKKGFKPHMVHSPVDVEKYLIEQGGSEILDRLGVHNH
EDDVLNEAYIAIVFSDSEILRSVWLLDTPGDLNGSDESDTEKALGGVELADGVVFVSNHTGFFKDSDLGFASNIIRQRPP
VDKEKPLDHLMFIQSHCHSEISRDDVEAVGRVTFKRIKKQLDNLIFSSWMEDGFITQLPESSELTARVQPFWRENNDYRS
DTLRKITEMASSLTLNQESIVDKYISNILKNIENMLLSEIENLKNKKSETFERIKEVNEKDARFRELSTQLIKDFNSLIE
SCNSHKKHDLDVISTYYKYNTSVEGLEELINDTYSDKKEAQSELGNYIGQLLTTKLESTLKTSGKAVSTELDSLLLRWQE
AAPTISTTGIDTQISGLGAEFSAFNSRAAFVGGLAGLGSLGAMALYVSTIASNLGAYILVGKAAGVLVSLGLVGSVTTVT
SFVAAIGGPITIGIALAAAIGYIIYRLAGGSWQKSLAKKAAEAIRKESVFDDIEKAVTEYWNSTSKAIKAGLDELIIKTD
EYIENLKADAKVEYDIDEVDVCVSLIDDTLLILKSSD

Sequences:

>Translated_757_residues
MKHDELNERLRTFLISSRENAGLSQSDVAARSEVFGIGRTLDQRAVSRIESQPMNADAIKIAGYLSAVGIQPSKYYEILT
EYTYKEDDYIMSEVGEQTIKIKVEAAKSLISSVKDSIDCYNHEYIDSIGLKSKVEQLEAVVDGLNRKPVIGCFGHFDAGK
STLINTVINQSLLPTKYQPATCVVNLLMHESDKPETISGNVAVFKKGFKPHMVHSPVDVEKYLIEQGGSEILDRLGVHNH
EDDVLNEAYIAIVFSDSEILRSVWLLDTPGDLNGSDESDTEKALGGVELADGVVFVSNHTGFFKDSDLGFASNIIRQRPP
VDKEKPLDHLMFIQSHCHSEISRDDVEAVGRVTFKRIKKQLDNLIFSSWMEDGFITQLPESSELTARVQPFWRENNDYRS
DTLRKITEMASSLTLNQESIVDKYISNILKNIENMLLSEIENLKNKKSETFERIKEVNEKDARFRELSTQLIKDFNSLIE
SCNSHKKHDLDVISTYYKYNTSVEGLEELINDTYSDKKEAQSELGNYIGQLLTTKLESTLKTSGKAVSTELDSLLLRWQE
AAPTISTTGIDTQISGLGAEFSAFNSRAAFVGGLAGLGSLGAMALYVSTIASNLGAYILVGKAAGVLVSLGLVGSVTTVT
SFVAAIGGPITIGIALAAAIGYIIYRLAGGSWQKSLAKKAAEAIRKESVFDDIEKAVTEYWNSTSKAIKAGLDELIIKTD
EYIENLKADAKVEYDIDEVDVCVSLIDDTLLILKSSD
>Mature_757_residues
MKHDELNERLRTFLISSRENAGLSQSDVAARSEVFGIGRTLDQRAVSRIESQPMNADAIKIAGYLSAVGIQPSKYYEILT
EYTYKEDDYIMSEVGEQTIKIKVEAAKSLISSVKDSIDCYNHEYIDSIGLKSKVEQLEAVVDGLNRKPVIGCFGHFDAGK
STLINTVINQSLLPTKYQPATCVVNLLMHESDKPETISGNVAVFKKGFKPHMVHSPVDVEKYLIEQGGSEILDRLGVHNH
EDDVLNEAYIAIVFSDSEILRSVWLLDTPGDLNGSDESDTEKALGGVELADGVVFVSNHTGFFKDSDLGFASNIIRQRPP
VDKEKPLDHLMFIQSHCHSEISRDDVEAVGRVTFKRIKKQLDNLIFSSWMEDGFITQLPESSELTARVQPFWRENNDYRS
DTLRKITEMASSLTLNQESIVDKYISNILKNIENMLLSEIENLKNKKSETFERIKEVNEKDARFRELSTQLIKDFNSLIE
SCNSHKKHDLDVISTYYKYNTSVEGLEELINDTYSDKKEAQSELGNYIGQLLTTKLESTLKTSGKAVSTELDSLLLRWQE
AAPTISTTGIDTQISGLGAEFSAFNSRAAFVGGLAGLGSLGAMALYVSTIASNLGAYILVGKAAGVLVSLGLVGSVTTVT
SFVAAIGGPITIGIALAAAIGYIIYRLAGGSWQKSLAKKAAEAIRKESVFDDIEKAVTEYWNSTSKAIKAGLDELIIKTD
EYIENLKADAKVEYDIDEVDVCVSLIDDTLLILKSSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83546; Mature: 83546

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHDELNERLRTFLISSRENAGLSQSDVAARSEVFGIGRTLDQRAVSRIESQPMNADAIK
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHH
IAGYLSAVGIQPSKYYEILTEYTYKEDDYIMSEVGEQTIKIKVEAAKSLISSVKDSIDCY
HHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHC
NHEYIDSIGLKSKVEQLEAVVDGLNRKPVIGCFGHFDAGKSTLINTVINQSLLPTKYQPA
CHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCH
TCVVNLLMHESDKPETISGNVAVFKKGFKPHMVHSPVDVEKYLIEQGGSEILDRLGVHNH
HHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCC
EDDVLNEAYIAIVFSDSEILRSVWLLDTPGDLNGSDESDTEKALGGVELADGVVFVSNHT
CHHHHCCEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCC
GFFKDSDLGFASNIIRQRPPVDKEKPLDHLMFIQSHCHSEISRDDVEAVGRVTFKRIKKQ
CCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LDNLIFSSWMEDGFITQLPESSELTARVQPFWRENNDYRSDTLRKITEMASSLTLNQESI
HHHHHHHHHHCCCCEECCCCCCCCHHHHCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH
VDKYISNILKNIENMLLSEIENLKNKKSETFERIKEVNEKDARFRELSTQLIKDFNSLIE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SCNSHKKHDLDVISTYYKYNTSVEGLEELINDTYSDKKEAQSELGNYIGQLLTTKLESTL
HHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
KTSGKAVSTELDSLLLRWQEAAPTISTTGIDTQISGLGAEFSAFNSRAAFVGGLAGLGSL
HHCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHCCCCHHHHHCCHHHHHHHHHHHHHH
GAMALYVSTIASNLGAYILVGKAAGVLVSLGLVGSVTTVTSFVAAIGGPITIGIALAAAI
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GYIIYRLAGGSWQKSLAKKAAEAIRKESVFDDIEKAVTEYWNSTSKAIKAGLDELIIKTD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EYIENLKADAKVEYDIDEVDVCVSLIDDTLLILKSSD
HHHHHCCCCCEEECCHHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure
MKHDELNERLRTFLISSRENAGLSQSDVAARSEVFGIGRTLDQRAVSRIESQPMNADAIK
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHH
IAGYLSAVGIQPSKYYEILTEYTYKEDDYIMSEVGEQTIKIKVEAAKSLISSVKDSIDCY
HHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHC
NHEYIDSIGLKSKVEQLEAVVDGLNRKPVIGCFGHFDAGKSTLINTVINQSLLPTKYQPA
CHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCH
TCVVNLLMHESDKPETISGNVAVFKKGFKPHMVHSPVDVEKYLIEQGGSEILDRLGVHNH
HHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCC
EDDVLNEAYIAIVFSDSEILRSVWLLDTPGDLNGSDESDTEKALGGVELADGVVFVSNHT
CHHHHCCEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCC
GFFKDSDLGFASNIIRQRPPVDKEKPLDHLMFIQSHCHSEISRDDVEAVGRVTFKRIKKQ
CCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LDNLIFSSWMEDGFITQLPESSELTARVQPFWRENNDYRSDTLRKITEMASSLTLNQESI
HHHHHHHHHHCCCCEECCCCCCCCHHHHCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH
VDKYISNILKNIENMLLSEIENLKNKKSETFERIKEVNEKDARFRELSTQLIKDFNSLIE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SCNSHKKHDLDVISTYYKYNTSVEGLEELINDTYSDKKEAQSELGNYIGQLLTTKLESTL
HHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
KTSGKAVSTELDSLLLRWQEAAPTISTTGIDTQISGLGAEFSAFNSRAAFVGGLAGLGSL
HHCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHCCCCHHHHHCCHHHHHHHHHHHHHH
GAMALYVSTIASNLGAYILVGKAAGVLVSLGLVGSVTTVTSFVAAIGGPITIGIALAAAI
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GYIIYRLAGGSWQKSLAKKAAEAIRKESVFDDIEKAVTEYWNSTSKAIKAGLDELIIKTD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EYIENLKADAKVEYDIDEVDVCVSLIDDTLLILKSSD
HHHHHCCCCCEEECCHHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA