Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597971

Identifier: 120597971

GI number: 120597971

Start: 1300188

End: 1300706

Strand: Direct

Name: 120597971

Synonym: Sputw3181_1148

Alternate gene names: NA

Gene position: 1300188-1300706 (Clockwise)

Preceding gene: 120597970

Following gene: 120597974

Centisome position: 27.61

GC content: 38.73

Gene sequence:

>519_bases
ATGGCTTGGTGGTTCGCTGCTCCTCTTGTTATATGGGGGGCAAAAAAAATATATGATGCTGTTACTGAAGATGATGAGCC
ATCATATAGCTCAAGTTCAAGTAGTACACTATCTTCTGCGAAGTCTACTCGTACAAAGTTAAGGAAAAAACTCATACGAG
AAGCAATACTTGAGAATAGGAAGTCGCTAATATCAAAGGCTTTTAGCGATAGAGAGTCTGAACTTGTTAAGTTGGATGGC
TCAAGTAAAGCCGATGCGATCTTAGACGTTTCCGGTTTTAATGCGGCTTTAGGTAATTTGTCTAGCACTGTAAGGTTGTT
AAATCCTACTTATAGTGAGAGTTTTGAGGAAGTTGATGGTTCGTTGTTGGTTTTCACAGATTTAAACTCGGAGGTCAACA
ATGTTGCAAAAAAAGCTGACGATGAATATGGTTCAATGGCGGGCATTGATCACTACAATGAATACGATAGATCCATAGAT
CCATTCATAGCTAAGTTGCAAAGTGAGATTTCAAGATAA

Upstream 100 bases:

>100_bases
GTTGAATATGATATTGATGAAGTTGATGTATGTGTCTCACTTATCGATGACACGTTATTAATTCTTAAGTCTAGCGACTA
ACTCTTGATGGGAGGTATTT

Downstream 100 bases:

>100_bases
ATACAGTTTAATTAGTGGGATCTAAAATAGGGGCATACTGCCCCTATTATTTTATTATCTATTTTATATGGTGGTTTTTA
TTGCCTTGTAAGGCTTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MAWWFAAPLVIWGAKKIYDAVTEDDEPSYSSSSSSTLSSAKSTRTKLRKKLIREAILENRKSLISKAFSDRESELVKLDG
SSKADAILDVSGFNAALGNLSSTVRLLNPTYSESFEEVDGSLLVFTDLNSEVNNVAKKADDEYGSMAGIDHYNEYDRSID
PFIAKLQSEISR

Sequences:

>Translated_172_residues
MAWWFAAPLVIWGAKKIYDAVTEDDEPSYSSSSSSTLSSAKSTRTKLRKKLIREAILENRKSLISKAFSDRESELVKLDG
SSKADAILDVSGFNAALGNLSSTVRLLNPTYSESFEEVDGSLLVFTDLNSEVNNVAKKADDEYGSMAGIDHYNEYDRSID
PFIAKLQSEISR
>Mature_171_residues
AWWFAAPLVIWGAKKIYDAVTEDDEPSYSSSSSSTLSSAKSTRTKLRKKLIREAILENRKSLISKAFSDRESELVKLDGS
SKADAILDVSGFNAALGNLSSTVRLLNPTYSESFEEVDGSLLVFTDLNSEVNNVAKKADDEYGSMAGIDHYNEYDRSIDP
FIAKLQSEISR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19016; Mature: 18885

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWWFAAPLVIWGAKKIYDAVTEDDEPSYSSSSSSTLSSAKSTRTKLRKKLIREAILENR
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSLISKAFSDRESELVKLDGSSKADAILDVSGFNAALGNLSSTVRLLNPTYSESFEEVDG
HHHHHHHHHCCHHHEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCC
SLLVFTDLNSEVNNVAKKADDEYGSMAGIDHYNEYDRSIDPFIAKLQSEISR
CEEEEECCCHHHHHHHHHHCHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AWWFAAPLVIWGAKKIYDAVTEDDEPSYSSSSSSTLSSAKSTRTKLRKKLIREAILENR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSLISKAFSDRESELVKLDGSSKADAILDVSGFNAALGNLSSTVRLLNPTYSESFEEVDG
HHHHHHHHHCCHHHEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCC
SLLVFTDLNSEVNNVAKKADDEYGSMAGIDHYNEYDRSIDPFIAKLQSEISR
CEEEEECCCHHHHHHHHHHCHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA