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The map label for this gene is traC [H]

Identifier: 120597963

GI number: 120597963

Start: 1288318

End: 1290717

Strand: Direct

Name: traC [H]

Synonym: Sputw3181_1140

Alternate gene names: 120597963

Gene position: 1288318-1290717 (Clockwise)

Preceding gene: 120597962

Following gene: 120597964

Centisome position: 27.36

GC content: 49.29

Gene sequence:

>2400_bases
ATGAAAGCCTCTCTGTATTCAGGGCAACGCGCTTCAGAGCTGTTGCCAGTATTGGCCTATTCAGACGATGAGCAACTGTT
TTTCATGGAAGACCAGAGTGTTGGCTTTGGTTTTCTATGTGACCCATTGCCGGGTGGTGATGAGTCTGTTGCAGATAGGG
TTAATGTTCTACTCAACAACGACTGGCCAAAAGACACTTTGCTGCAATTTGGCCTGTACGCCTCGCCTGATATTCAAACC
GACCTTCAACGCATGATGGGCTTACGGCATCGTCAATCCGATCCATTGCTCAGGGCGTCGATACGCAAACGTGCGGATTT
CCTCGATGGGGGCACGGTTCAACCGATAGAAGAATCGACCCAGACTCAGGTACGCAACTTTCAACTGATCGTCACCTGCA
AATTGCCTTTGGAAAGTCCTATACCGACGGAGCGTGAGTTGAGTCGAGCATCCGCGATTCGGGCTTCTTTCTCGCAAGCG
CTGGCAACGGTTGGTTTTCGCGTCACTGAGATGACTGACCGAAATTGGCTCGCGGCATTAAGTTCGCAACTTAACTGGGG
AAAAGATGCTTCTTGGCGCAATCCATCTCCAATCCGCAGTGAGGCAGATAAACCACTTCGAGAGCAAGTGTTGGATTATG
ACCGAGCTATCAAGGTGGATAGCCAAGGTCTGATGCTGGGCGATTACCGAGTTAAAACCTTATCGTTTAAGCGCTTGCCT
GAGCGGATCTGGTTTGGTCATGCCGCAAGTTTTGCGGGCGATATGATGACGGGCAGTCGCGGTTTACGCGGCAGCTTTTT
GCTGAATGTCACCATTCACTTTCCTTCAGCCGAGGCCATGCGATCTCGTTTAGAGACGAAGCGTCAATGGGCGGTCAATC
AGGCCTATGGCCCGATGCTCAAGTTTGTGCCGGTGCTTGCAGCCAAGAAAAAGGGATTTGATGTTCTTTTTGAAGCCTTG
CAAGAAGGTGATCGTCCTATTCGGGCAAACATGACCTTAACGCTGTTTTCCCAAACGGAAGAAGCGTCCATCAGCTCTGT
TTCAAATGCTCGAACTTATTTCAAAGAACTCGGATTTGAGCTGATGGAAGACAAGTACTTCTGTTTGCCCATTTTTCTGA
ATGCCCTGCCATTTGGTGCCGACCGCCAGGCGATGAACGACTTGTTTCGATTCAAGACCATGGCGACACGGCATGTGATC
CCTCTGTTGCCTTTGTTTGCGGATTGGAAAGGCACGGGCACGCCAGTGATTAACTTTGTTTCCCGTAATGGCCAGATCAT
GAGTGTGTCCCTTTATGACTCGGGCAGTAATTACAACTGTTGCATCGCGGCGCAATCGGGGTCGGGTAAGTCATTCCTGG
TGAACGAAATCATCTCCTCCTACTTATCTGAAGGCGGCCAATGCTGGGTGATTGATGTTGGCCGCTCTTATGAAAAGCTG
TGTGAAGTCTATGACGGTGAGTTCTTACAGTTCGGGCGGGACAGTGGCATTTGCTTGAATCCGTTTGAAATTGTTGAGGA
CTATGACGAAGAAGCGGATGTGCTGGTTGGGCTATTGGCTGCAATGGCCGCACCTACGCAGTCATTAACTGATTTTCAGA
TGGCCAACCTAAAGCGTCAGACCCGTGAACTTTGGGAGAAAAAAGGTCGTGCCATGTTGGTTGATGATGTGGCTGAGGCC
TTAAAAAATCATGAAGACCGTCGTGTGCAAGACGTGGGTGAGCAGCTCTATCCGTTTACGACACAGGGCGAATATGGCCG
TTTCTTTAATGGTCACAACAATATTCGTTTCAAAAACCGTTTCACTGTTCTGGAGTTAGAAGAGCTCAAGGGGCGCAAGC
ACCTACAACAAGTGGTGTTGCTTCAGCTTATCTACCAAATCCAACAAGAGATGTACTTAGGTGAGCGGGATCGTCGCAAG
ATTGTGTTCATTGACGAAGCCTGGGATCTGCTGACTCAAGGTGATGTCGGTAAGTTTATCGAGACGGGTTACCGTCGATT
TCGAAAATATGGCGGCAGTGCTGTAACGGTAACGCAGTCGGTCAACGATTTATACGACAGCCCTACAGGTAAAGCCATCG
CTGAAAACTCGGCCAATATGTACCTGCTTGGCCAAAAAGCTGAAACCATCAACGCGCTCAAAAAAGAAGGCCGCTTGCCA
CTCGGTGAAGGCGGTTATGAATACCTGAAAACCGTTCATACCGTCACTGGTGTCTATTCCGAAATTTTCTTTATTACCGA
GATGGGCACCGGGATTGGCCGCCTCATCGTCGATCCGTTTCACAAGCTGTTGTACTCGTCCCGTGCAGAAGATGTAAACG
CGATTAAGCAGTTAACGCGTAAAGGCCTTTCTGTTGCTGATGCCATCTCCCAGTTGTTAAAGGAGCGAGGCTATGAATAA

Upstream 100 bases:

>100_bases
AAATCCTGGGCATTCAAGGTGTGCCTTTCATCGTCGCCAATGATGGTCGCATCAGTCGAGGCCGTCCTTATGATCTTTCT
GCTTGGTTGGAGGGGCGTTA

Downstream 100 bases:

>100_bases
GTCCACGCTTTGGCCATTTATGGCCTCTATTACTTTGTCTATTGCAGGCAGCGGTTTAATGACCAGCTGGCTCTTAATGA
AAACACTCGAACCTATCCAC

Product: sex pilus assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 799; Mature: 799

Protein sequence:

>799_residues
MKASLYSGQRASELLPVLAYSDDEQLFFMEDQSVGFGFLCDPLPGGDESVADRVNVLLNNDWPKDTLLQFGLYASPDIQT
DLQRMMGLRHRQSDPLLRASIRKRADFLDGGTVQPIEESTQTQVRNFQLIVTCKLPLESPIPTERELSRASAIRASFSQA
LATVGFRVTEMTDRNWLAALSSQLNWGKDASWRNPSPIRSEADKPLREQVLDYDRAIKVDSQGLMLGDYRVKTLSFKRLP
ERIWFGHAASFAGDMMTGSRGLRGSFLLNVTIHFPSAEAMRSRLETKRQWAVNQAYGPMLKFVPVLAAKKKGFDVLFEAL
QEGDRPIRANMTLTLFSQTEEASISSVSNARTYFKELGFELMEDKYFCLPIFLNALPFGADRQAMNDLFRFKTMATRHVI
PLLPLFADWKGTGTPVINFVSRNGQIMSVSLYDSGSNYNCCIAAQSGSGKSFLVNEIISSYLSEGGQCWVIDVGRSYEKL
CEVYDGEFLQFGRDSGICLNPFEIVEDYDEEADVLVGLLAAMAAPTQSLTDFQMANLKRQTRELWEKKGRAMLVDDVAEA
LKNHEDRRVQDVGEQLYPFTTQGEYGRFFNGHNNIRFKNRFTVLELEELKGRKHLQQVVLLQLIYQIQQEMYLGERDRRK
IVFIDEAWDLLTQGDVGKFIETGYRRFRKYGGSAVTVTQSVNDLYDSPTGKAIAENSANMYLLGQKAETINALKKEGRLP
LGEGGYEYLKTVHTVTGVYSEIFFITEMGTGIGRLIVDPFHKLLYSSRAEDVNAIKQLTRKGLSVADAISQLLKERGYE

Sequences:

>Translated_799_residues
MKASLYSGQRASELLPVLAYSDDEQLFFMEDQSVGFGFLCDPLPGGDESVADRVNVLLNNDWPKDTLLQFGLYASPDIQT
DLQRMMGLRHRQSDPLLRASIRKRADFLDGGTVQPIEESTQTQVRNFQLIVTCKLPLESPIPTERELSRASAIRASFSQA
LATVGFRVTEMTDRNWLAALSSQLNWGKDASWRNPSPIRSEADKPLREQVLDYDRAIKVDSQGLMLGDYRVKTLSFKRLP
ERIWFGHAASFAGDMMTGSRGLRGSFLLNVTIHFPSAEAMRSRLETKRQWAVNQAYGPMLKFVPVLAAKKKGFDVLFEAL
QEGDRPIRANMTLTLFSQTEEASISSVSNARTYFKELGFELMEDKYFCLPIFLNALPFGADRQAMNDLFRFKTMATRHVI
PLLPLFADWKGTGTPVINFVSRNGQIMSVSLYDSGSNYNCCIAAQSGSGKSFLVNEIISSYLSEGGQCWVIDVGRSYEKL
CEVYDGEFLQFGRDSGICLNPFEIVEDYDEEADVLVGLLAAMAAPTQSLTDFQMANLKRQTRELWEKKGRAMLVDDVAEA
LKNHEDRRVQDVGEQLYPFTTQGEYGRFFNGHNNIRFKNRFTVLELEELKGRKHLQQVVLLQLIYQIQQEMYLGERDRRK
IVFIDEAWDLLTQGDVGKFIETGYRRFRKYGGSAVTVTQSVNDLYDSPTGKAIAENSANMYLLGQKAETINALKKEGRLP
LGEGGYEYLKTVHTVTGVYSEIFFITEMGTGIGRLIVDPFHKLLYSSRAEDVNAIKQLTRKGLSVADAISQLLKERGYE
>Mature_799_residues
MKASLYSGQRASELLPVLAYSDDEQLFFMEDQSVGFGFLCDPLPGGDESVADRVNVLLNNDWPKDTLLQFGLYASPDIQT
DLQRMMGLRHRQSDPLLRASIRKRADFLDGGTVQPIEESTQTQVRNFQLIVTCKLPLESPIPTERELSRASAIRASFSQA
LATVGFRVTEMTDRNWLAALSSQLNWGKDASWRNPSPIRSEADKPLREQVLDYDRAIKVDSQGLMLGDYRVKTLSFKRLP
ERIWFGHAASFAGDMMTGSRGLRGSFLLNVTIHFPSAEAMRSRLETKRQWAVNQAYGPMLKFVPVLAAKKKGFDVLFEAL
QEGDRPIRANMTLTLFSQTEEASISSVSNARTYFKELGFELMEDKYFCLPIFLNALPFGADRQAMNDLFRFKTMATRHVI
PLLPLFADWKGTGTPVINFVSRNGQIMSVSLYDSGSNYNCCIAAQSGSGKSFLVNEIISSYLSEGGQCWVIDVGRSYEKL
CEVYDGEFLQFGRDSGICLNPFEIVEDYDEEADVLVGLLAAMAAPTQSLTDFQMANLKRQTRELWEKKGRAMLVDDVAEA
LKNHEDRRVQDVGEQLYPFTTQGEYGRFFNGHNNIRFKNRFTVLELEELKGRKHLQQVVLLQLIYQIQQEMYLGERDRRK
IVFIDEAWDLLTQGDVGKFIETGYRRFRKYGGSAVTVTQSVNDLYDSPTGKAIAENSANMYLLGQKAETINALKKEGRLP
LGEGGYEYLKTVHTVTGVYSEIFFITEMGTGIGRLIVDPFHKLLYSSRAEDVNAIKQLTRKGLSVADAISQLLKERGYE

Specific function: Required for the assembly of mature F-pilin subunits into extended F pili [H]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR014117 [H]

Pfam domain/function: PF01935 DUF87 [H]

EC number: NA

Molecular weight: Translated: 90220; Mature: 90220

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASLYSGQRASELLPVLAYSDDEQLFFMEDQSVGFGFLCDPLPGGDESVADRVNVLLNN
CCCCCCCCCCHHHHCEEEEECCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHEECC
DWPKDTLLQFGLYASPDIQTDLQRMMGLRHRQSDPLLRASIRKRADFLDGGTVQPIEEST
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH
QTQVRNFQLIVTCKLPLESPIPTERELSRASAIRASFSQALATVGFRVTEMTDRNWLAAL
HHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHH
SSQLNWGKDASWRNPSPIRSEADKPLREQVLDYDRAIKVDSQGLMLGDYRVKTLSFKRLP
HHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHCHHHEEEECCCCEEEECEEEEEHHHHHHH
ERIWFGHAASFAGDMMTGSRGLRGSFLLNVTIHFPSAEAMRSRLETKRQWAVNQAYGPML
HHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
KFVPVLAAKKKGFDVLFEALQEGDRPIRANMTLTLFSQTEEASISSVSNARTYFKELGFE
HHHHHHHHCCCCHHHHHHHHHCCCCCEEECEEEEEECCCCHHHHHHHHHHHHHHHHHCHH
LMEDKYFCLPIFLNALPFGADRQAMNDLFRFKTMATRHVIPLLPLFADWKGTGTPVINFV
HHCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
SRNGQIMSVSLYDSGSNYNCCIAAQSGSGKSFLVNEIISSYLSEGGQCWVIDVGRSYEKL
CCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHH
CEVYDGEFLQFGRDSGICLNPFEIVEDYDEEADVLVGLLAAMAAPTQSLTDFQMANLKRQ
HHHHCCHHHHCCCCCCCEECHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TRELWEKKGRAMLVDDVAEALKNHEDRRVQDVGEQLYPFTTQGEYGRFFNGHNNIRFKNR
HHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEECC
FTVLELEELKGRKHLQQVVLLQLIYQIQQEMYLGERDRRKIVFIDEAWDLLTQGDVGKFI
EEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHCCCCHHHHH
ETGYRRFRKYGGSAVTVTQSVNDLYDSPTGKAIAENSANMYLLGQKAETINALKKEGRLP
HHHHHHHHHCCCCEEEEECCHHHHHCCCCCCEECCCCCCEEEECCCHHHHHHHHHCCCCC
LGEGGYEYLKTVHTVTGVYSEIFFITEMGTGIGRLIVDPFHKLLYSSRAEDVNAIKQLTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KGLSVADAISQLLKERGYE
CCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKASLYSGQRASELLPVLAYSDDEQLFFMEDQSVGFGFLCDPLPGGDESVADRVNVLLNN
CCCCCCCCCCHHHHCEEEEECCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHEECC
DWPKDTLLQFGLYASPDIQTDLQRMMGLRHRQSDPLLRASIRKRADFLDGGTVQPIEEST
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH
QTQVRNFQLIVTCKLPLESPIPTERELSRASAIRASFSQALATVGFRVTEMTDRNWLAAL
HHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHH
SSQLNWGKDASWRNPSPIRSEADKPLREQVLDYDRAIKVDSQGLMLGDYRVKTLSFKRLP
HHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHCHHHEEEECCCCEEEECEEEEEHHHHHHH
ERIWFGHAASFAGDMMTGSRGLRGSFLLNVTIHFPSAEAMRSRLETKRQWAVNQAYGPML
HHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
KFVPVLAAKKKGFDVLFEALQEGDRPIRANMTLTLFSQTEEASISSVSNARTYFKELGFE
HHHHHHHHCCCCHHHHHHHHHCCCCCEEECEEEEEECCCCHHHHHHHHHHHHHHHHHCHH
LMEDKYFCLPIFLNALPFGADRQAMNDLFRFKTMATRHVIPLLPLFADWKGTGTPVINFV
HHCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
SRNGQIMSVSLYDSGSNYNCCIAAQSGSGKSFLVNEIISSYLSEGGQCWVIDVGRSYEKL
CCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHH
CEVYDGEFLQFGRDSGICLNPFEIVEDYDEEADVLVGLLAAMAAPTQSLTDFQMANLKRQ
HHHHCCHHHHCCCCCCCEECHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TRELWEKKGRAMLVDDVAEALKNHEDRRVQDVGEQLYPFTTQGEYGRFFNGHNNIRFKNR
HHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEECC
FTVLELEELKGRKHLQQVVLLQLIYQIQQEMYLGERDRRKIVFIDEAWDLLTQGDVGKFI
EEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHCCCCHHHHH
ETGYRRFRKYGGSAVTVTQSVNDLYDSPTGKAIAENSANMYLLGQKAETINALKKEGRLP
HHHHHHHHHCCCCEEEEECCHHHHHCCCCCCEECCCCCCEEEECCCHHHHHHHHHCCCCC
LGEGGYEYLKTVHTVTGVYSEIFFITEMGTGIGRLIVDPFHKLLYSSRAEDVNAIKQLTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KGLSVADAISQLLKERGYE
CCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2265751; 7915817; 1355084 [H]