Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597911

Identifier: 120597911

GI number: 120597911

Start: 1229186

End: 1229629

Strand: Direct

Name: 120597911

Synonym: Sputw3181_1081

Alternate gene names: NA

Gene position: 1229186-1229629 (Clockwise)

Preceding gene: 120597906

Following gene: 120597914

Centisome position: 26.11

GC content: 45.5

Gene sequence:

>444_bases
TTGGGTGAGGAAATTGGTTTGGTAGAAATCGTCAATGAACAATGGAAAGCAGAGGTATCAGATTTACTTCAGCAAGAAAC
GGACAGGCTAAAAGCACTGGCAAGAGCTGAAGTTGATGACTTTTGGGTTACCCATTACAAGGTTCGAGAGAATGAGCCCT
TTAAAGATTGGGGCCTGCTTGGTGTCCGTATCAGAGACTTTAAGTATGGCTTTGGCATAGAGTGGTACATCAACAGTTTT
CACGGTCAACGAGGCAAGCGCGTGGTCTTTAGTAAGGGACTGCGTATTTCAAAGACGAAGCTGAGATACGCATTTTTGGA
CTGCCAAGGTCTAGCCAAAGAATGGGAGTTAGCGCTGGCCATGGAGAAAGAAGAATTCTTCAGTGATGTTCGACGCCAAG
TAGATAAGCTCAACATGCTGCGTCGCAGAGTGAATGCCTATTGA

Upstream 100 bases:

>100_bases
ATTTATATCGAGACGCCAAACAGTGATTGTGACGGTAGTTTTACGTTTGGCGTTTCGATCCAAAAGCCAAACGGATAGTG
GTTTTGGCTTTTGGGGTTAA

Downstream 100 bases:

>100_bases
GTTAACTGCGCTACTTCACTCTCGGCAACTGGTCCCAGCGTGTTGTGTAGGCGGGAGACAAATGCTCTCGCTTCATCGAC
CAATCTTTCTTCGTACCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MGEEIGLVEIVNEQWKAEVSDLLQQETDRLKALARAEVDDFWVTHYKVRENEPFKDWGLLGVRIRDFKYGFGIEWYINSF
HGQRGKRVVFSKGLRISKTKLRYAFLDCQGLAKEWELALAMEKEEFFSDVRRQVDKLNMLRRRVNAY

Sequences:

>Translated_147_residues
MGEEIGLVEIVNEQWKAEVSDLLQQETDRLKALARAEVDDFWVTHYKVRENEPFKDWGLLGVRIRDFKYGFGIEWYINSF
HGQRGKRVVFSKGLRISKTKLRYAFLDCQGLAKEWELALAMEKEEFFSDVRRQVDKLNMLRRRVNAY
>Mature_146_residues
GEEIGLVEIVNEQWKAEVSDLLQQETDRLKALARAEVDDFWVTHYKVRENEPFKDWGLLGVRIRDFKYGFGIEWYINSFH
GQRGKRVVFSKGLRISKTKLRYAFLDCQGLAKEWELALAMEKEEFFSDVRRQVDKLNMLRRRVNAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17509; Mature: 17378

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEEIGLVEIVNEQWKAEVSDLLQQETDRLKALARAEVDDFWVTHYKVRENEPFKDWGLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCEE
GVRIRDFKYGFGIEWYINSFHGQRGKRVVFSKGLRISKTKLRYAFLDCQGLAKEWELALA
EEEEEEEECCCCCEEEEECCCCCCCCEEEECCCCEEEHHHHHEEEECCHHHHHHHHHHHH
MEKEEFFSDVRRQVDKLNMLRRRVNAY
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GEEIGLVEIVNEQWKAEVSDLLQQETDRLKALARAEVDDFWVTHYKVRENEPFKDWGLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCEE
GVRIRDFKYGFGIEWYINSFHGQRGKRVVFSKGLRISKTKLRYAFLDCQGLAKEWELALA
EEEEEEEECCCCCEEEEECCCCCCCCEEEECCCCEEEHHHHHEEEECCHHHHHHHHHHHH
MEKEEFFSDVRRQVDKLNMLRRRVNAY
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA