| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597823
Identifier: 120597823
GI number: 120597823
Start: 1133901
End: 1134266
Strand: Direct
Name: 120597823
Synonym: Sputw3181_0993
Alternate gene names: NA
Gene position: 1133901-1134266 (Clockwise)
Preceding gene: 120597822
Following gene: 120597824
Centisome position: 24.08
GC content: 36.07
Gene sequence:
>366_bases ATGTTGGAAAAAGTAGAGCAAATACTTGATAAGAATCATTTATCTTATAAAAATGTAGGCAATTCACTTCACCTAAAGTT GGCTCGAGCAGGTGGAAAAGTCACAATCAAATATGACTACTCGATAAATTCGTACCTATATAGTTGTAATGAATACCTAT TAAGCTTCTCTAGTCTCATTTTCTTTGTTATATCTTTCAGCACGTTATATCAGCCTGACAAACAAATGTGGTCTGGCTAT GTGGCTGGGTGCATGTTTGCAGCAGCAGTGTTCAATCTATTCCAAATAGTACTGGCTCACATACAAATGTTGGATTTGAA ATCTCAATTTAGAGAAGTGGGTGTTTATCTCAAGTCCGGCTCATAA
Upstream 100 bases:
>100_bases TCTCGTACATATTGAACACATCTTGCAGTAATCGTTGTAGAAATTGCAGTACCAACGCTAGTGGTACTGCTAAATCAATG GTCATGGAGGACATTGAAGA
Downstream 100 bases:
>100_bases CAAACGCCTCAAGATGGACTGTCAACGCGTGGCGTTTCCAGTCCCAATGAGCCGTAGTGGTTGCAGTTGTTTCGTTTGAG TTTAGTGGTAATGCGTTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MLEKVEQILDKNHLSYKNVGNSLHLKLARAGGKVTIKYDYSINSYLYSCNEYLLSFSSLIFFVISFSTLYQPDKQMWSGY VAGCMFAAAVFNLFQIVLAHIQMLDLKSQFREVGVYLKSGS
Sequences:
>Translated_121_residues MLEKVEQILDKNHLSYKNVGNSLHLKLARAGGKVTIKYDYSINSYLYSCNEYLLSFSSLIFFVISFSTLYQPDKQMWSGY VAGCMFAAAVFNLFQIVLAHIQMLDLKSQFREVGVYLKSGS >Mature_121_residues MLEKVEQILDKNHLSYKNVGNSLHLKLARAGGKVTIKYDYSINSYLYSCNEYLLSFSSLIFFVISFSTLYQPDKQMWSGY VAGCMFAAAVFNLFQIVLAHIQMLDLKSQFREVGVYLKSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13799; Mature: 13799
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKVEQILDKNHLSYKNVGNSLHLKLARAGGKVTIKYDYSINSYLYSCNEYLLSFSSLI CHHHHHHHHCCCCCCHHHCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH FFVISFSTLYQPDKQMWSGYVAGCMFAAAVFNLFQIVLAHIQMLDLKSQFREVGVYLKSG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC S C >Mature Secondary Structure MLEKVEQILDKNHLSYKNVGNSLHLKLARAGGKVTIKYDYSINSYLYSCNEYLLSFSSLI CHHHHHHHHCCCCCCHHHCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH FFVISFSTLYQPDKQMWSGYVAGCMFAAAVFNLFQIVLAHIQMLDLKSQFREVGVYLKSG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA