Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597822

Identifier: 120597822

GI number: 120597822

Start: 1131613

End: 1132731

Strand: Direct

Name: 120597822

Synonym: Sputw3181_0992

Alternate gene names: NA

Gene position: 1131613-1132731 (Clockwise)

Preceding gene: 120597821

Following gene: 120597823

Centisome position: 24.03

GC content: 50.31

Gene sequence:

>1119_bases
ATGGCAACCACCTACCATTTAAGCGATATCCTTCATCAGCACTTAGCCCACTACCAACAGCAGCATAAACTGACCGAACA
GCAAGCCTTAGTCTGCCAGCATATTCAGCAGTGTCGCACGCAAACCTTAGGCATACAGCAATGGCGTTGTGATACTTGCC
AATATGAGCAGCAGGTATTTTGCTCCTGTGGTGACCGGCATTGTCCTCGTTGCCAGGGAAGGCAGACACAAGCATGGATT
GCTGCGCAACAGGCGCAAGTCTTGCCTTGTCGCTATTTCCATTTGGTCTTTACCTTACCCCACGAGTTGAACATCTTGGC
GCACTACGCTGCCAAGCCGCTATACAGCGCCCTGTTTGAGTCGGTGTGGCAGACGCTTGCGCAGTTTGGTATGAAGCGAA
AACACCTTCAGGGTCAATTGGGTTGCACTATGGTGCTGCACACGTGGGGGCAAACCTTGAGTCAGCATATTCACTTGCAT
TGCTTAATCCCGGGTGGGGTGCTGACGTCAGCGGGAGATTGGCATAGCGTGAAAACGGATTATCTGTTTCCGGTGAAAGC
CTTGTCCACCGTGTATCGGGCCAAGTTATTACGGGTGCTTCGACAACATGAGCTGGCTATCCCTGCGGCTGACACCTTAA
TGGCAAAACCGTGGTGTGTTTACAGCAAAGCGTGTCTGAGCCGCGCTGAAACCGTGGTGGAATATCTCGGGCGTTATACC
CGTAAAGGCATGCTGCATGAATCAAGAATTGCCGACGTCACCGCAGAGCATGTCAGTTTTTACTACAAGGACTATCGTGA
CGGTCAGCAGCATAAGCAAATGCGGCTAAGCTGTGATGAGTTTATCCGCCGTTACTTATTACATGTGTTGCCCAAAGGGC
TGATGCGAGTGAGACACTTTGGTTTTCTCGCCAACGCTTGCCGCCGTAAAAAGCTCGCGCTTATCCAGCCGCAATTACGT
AAGCCGCAGGTGGTATTGGTGAGTCCTTTAGTTAAGGAGGACTGTTTGTGGTCATGTCCGCAATGCCAGTTAGGTCATTT
ACAGTTTATTGGGCTGATAAGACAGCAGGGATTAGTGATGATTAACAACCAAAGTCAGCCAATATGCCTGTCAGGATAA

Upstream 100 bases:

>100_bases
TTGGTCATCACAGTATTAAGTCCACCGAGCGCTACTTGCATTGGTCGCCGGAATTGGGTCATCAAGGGTGTGACTTGCTA
GCAAGTCTTGGGGGGATGCA

Downstream 100 bases:

>100_bases
CCCCTCCCTCAAGACGTAGCGTAACCGACAGCGAAAAGCAGCCAGTCTTATGGGGTAAGCCAGTGAGGGGATAGGGTGTG
AGTGTCAGCCTGAATGCGGG

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MATTYHLSDILHQHLAHYQQQHKLTEQQALVCQHIQQCRTQTLGIQQWRCDTCQYEQQVFCSCGDRHCPRCQGRQTQAWI
AAQQAQVLPCRYFHLVFTLPHELNILAHYAAKPLYSALFESVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLH
CLIPGGVLTSAGDWHSVKTDYLFPVKALSTVYRAKLLRVLRQHELAIPAADTLMAKPWCVYSKACLSRAETVVEYLGRYT
RKGMLHESRIADVTAEHVSFYYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHFGFLANACRRKKLALIQPQLR
KPQVVLVSPLVKEDCLWSCPQCQLGHLQFIGLIRQQGLVMINNQSQPICLSG

Sequences:

>Translated_372_residues
MATTYHLSDILHQHLAHYQQQHKLTEQQALVCQHIQQCRTQTLGIQQWRCDTCQYEQQVFCSCGDRHCPRCQGRQTQAWI
AAQQAQVLPCRYFHLVFTLPHELNILAHYAAKPLYSALFESVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLH
CLIPGGVLTSAGDWHSVKTDYLFPVKALSTVYRAKLLRVLRQHELAIPAADTLMAKPWCVYSKACLSRAETVVEYLGRYT
RKGMLHESRIADVTAEHVSFYYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHFGFLANACRRKKLALIQPQLR
KPQVVLVSPLVKEDCLWSCPQCQLGHLQFIGLIRQQGLVMINNQSQPICLSG
>Mature_371_residues
ATTYHLSDILHQHLAHYQQQHKLTEQQALVCQHIQQCRTQTLGIQQWRCDTCQYEQQVFCSCGDRHCPRCQGRQTQAWIA
AQQAQVLPCRYFHLVFTLPHELNILAHYAAKPLYSALFESVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLHC
LIPGGVLTSAGDWHSVKTDYLFPVKALSTVYRAKLLRVLRQHELAIPAADTLMAKPWCVYSKACLSRAETVVEYLGRYTR
KGMLHESRIADVTAEHVSFYYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHFGFLANACRRKKLALIQPQLRK
PQVVLVSPLVKEDCLWSCPQCQLGHLQFIGLIRQQGLVMINNQSQPICLSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007069 [H]

Pfam domain/function: PF04986 Transposase_32 [H]

EC number: NA

Molecular weight: Translated: 42978; Mature: 42847

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTYHLSDILHQHLAHYQQQHKLTEQQALVCQHIQQCRTQTLGIQQWRCDTCQYEQQVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHH
CSCGDRHCPRCQGRQTQAWIAAQQAQVLPCRYFHLVFTLPHELNILAHYAAKPLYSALFE
HHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLHCLIPGGVLTSAGDWHSVKTD
HHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCC
YLFPVKALSTVYRAKLLRVLRQHELAIPAADTLMAKPWCVYSKACLSRAETVVEYLGRYT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RKGMLHESRIADVTAEHVSFYYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHF
HCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
GFLANACRRKKLALIQPQLRKPQVVLVSPLVKEDCLWSCPQCQLGHLQFIGLIRQQGLVM
HHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEE
INNQSQPICLSG
ECCCCCCEECCC
>Mature Secondary Structure 
ATTYHLSDILHQHLAHYQQQHKLTEQQALVCQHIQQCRTQTLGIQQWRCDTCQYEQQVF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHH
CSCGDRHCPRCQGRQTQAWIAAQQAQVLPCRYFHLVFTLPHELNILAHYAAKPLYSALFE
HHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLHCLIPGGVLTSAGDWHSVKTD
HHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCC
YLFPVKALSTVYRAKLLRVLRQHELAIPAADTLMAKPWCVYSKACLSRAETVVEYLGRYT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RKGMLHESRIADVTAEHVSFYYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHF
HCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
GFLANACRRKKLALIQPQLRKPQVVLVSPLVKEDCLWSCPQCQLGHLQFIGLIRQQGLVM
HHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEE
INNQSQPICLSG
ECCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]