Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597811

Identifier: 120597811

GI number: 120597811

Start: 1116266

End: 1117375

Strand: Direct

Name: 120597811

Synonym: Sputw3181_0981

Alternate gene names: NA

Gene position: 1116266-1117375 (Clockwise)

Preceding gene: 120597810

Following gene: 120597813

Centisome position: 23.71

GC content: 29.55

Gene sequence:

>1110_bases
ATGATTATAAAACTAGATAAATCGATAGTCGAGTCGGTGACTAAAAATCCAGAATCACAATATTTATTACTTTTTTTAGA
AAAATTAGCGCAAACCATAGCGTATGGACATCATTGTGTTGTTTCAGATAGAGATACATTGGAAAAAATAATTTGCTTAA
ATGATATTAGTTTGTTTTCAAAAACAATTTTTAGAAAATCGCTAAATAAAATTACTTTTCTTGGTGATTTTTTAGCACAA
GATTTTGCTATAAGATTTATTTTTGTTGATAATTCTTTTGATTTTGAATGCGATTTTAGTGAGTTGTTTGTCGTTAATTT
ATTTGATTACAAGGGAAGTGTTACTTCGATCGATAGATTTTTAGGACGTTCGAATTTAATTGTTGAAGATGTTGATGATA
TTGTGGTTTACAACCTTGTAATGGAATCATATAAGTTGTTTAGAGGTGATAATTACAACTTGGACTTTGTGCCAGTACAT
GGTGGAGGCGATCGCTCTCATGAGGTCTGTTCTATCTTGTATACAACTAATTACAATGTATTTGCAATTTGTGATAGTGA
TAAAAAACACCCCCAAAGTAATGATGGTGTAACTGCTTTAAAATTAATACATTTTTTTGAATCGAAAAAGATAAGAGATA
GATTGCATGTTTTAAATTGTCATGAGGTTGAAAATTTAATTCCGTTAAATGTCATTGATAATAAGGCTAATAGTACTCAA
AGAATGCCAGTTGATTTTATTTCTAACGCTACGACTATAAATTTAGAAAGCTATTTGTATTATGATTTTAAACGGGGGCA
TAAATACAAAGAAGTTTTTAAAGATGAAAATAGTTTTTCAGAATACTGGAGGGGTTTATATGGTGCGTTTTCTTGTCCTC
TATTTTTAAAAAGATTAGCTGAGTTTGAAAACAATAGGCTAGATATTTCCCATAACTTGACAGCTAGTACTAGTTCCTTA
ATTTCTTTAATAAAAAAGGATATTAAGGATGGCAAAGTTGTTAGTATGGATATTTCAAGTTTGAGTCCTGCTTGCTTAAT
TCCGCTCTGGAAATTAATTGGTGAGATTTTTTATTTTTGGTTTATCTCTACACCAGTTGTTAAGCTGTAA

Upstream 100 bases:

>100_bases
CAAGATCGAGAAAGTCGAGAGACTAAAATAATTTCTGCAAATTTTGACCAAAACGGTTTTCTTAATAACTGGCCATTAGG
TTTTTTTGATTATTAATAAT

Downstream 100 bases:

>100_bases
TTTGAAATAATAATGTGAAATTTAATGAGTCATCCATTGTTAAATTTCTAAAACTGGTAGTAAACATTACTCGGTTTGCT
TTGAATGGCTAGCAAGTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MIIKLDKSIVESVTKNPESQYLLLFLEKLAQTIAYGHHCVVSDRDTLEKIICLNDISLFSKTIFRKSLNKITFLGDFLAQ
DFAIRFIFVDNSFDFECDFSELFVVNLFDYKGSVTSIDRFLGRSNLIVEDVDDIVVYNLVMESYKLFRGDNYNLDFVPVH
GGGDRSHEVCSILYTTNYNVFAICDSDKKHPQSNDGVTALKLIHFFESKKIRDRLHVLNCHEVENLIPLNVIDNKANSTQ
RMPVDFISNATTINLESYLYYDFKRGHKYKEVFKDENSFSEYWRGLYGAFSCPLFLKRLAEFENNRLDISHNLTASTSSL
ISLIKKDIKDGKVVSMDISSLSPACLIPLWKLIGEIFYFWFISTPVVKL

Sequences:

>Translated_369_residues
MIIKLDKSIVESVTKNPESQYLLLFLEKLAQTIAYGHHCVVSDRDTLEKIICLNDISLFSKTIFRKSLNKITFLGDFLAQ
DFAIRFIFVDNSFDFECDFSELFVVNLFDYKGSVTSIDRFLGRSNLIVEDVDDIVVYNLVMESYKLFRGDNYNLDFVPVH
GGGDRSHEVCSILYTTNYNVFAICDSDKKHPQSNDGVTALKLIHFFESKKIRDRLHVLNCHEVENLIPLNVIDNKANSTQ
RMPVDFISNATTINLESYLYYDFKRGHKYKEVFKDENSFSEYWRGLYGAFSCPLFLKRLAEFENNRLDISHNLTASTSSL
ISLIKKDIKDGKVVSMDISSLSPACLIPLWKLIGEIFYFWFISTPVVKL
>Mature_369_residues
MIIKLDKSIVESVTKNPESQYLLLFLEKLAQTIAYGHHCVVSDRDTLEKIICLNDISLFSKTIFRKSLNKITFLGDFLAQ
DFAIRFIFVDNSFDFECDFSELFVVNLFDYKGSVTSIDRFLGRSNLIVEDVDDIVVYNLVMESYKLFRGDNYNLDFVPVH
GGGDRSHEVCSILYTTNYNVFAICDSDKKHPQSNDGVTALKLIHFFESKKIRDRLHVLNCHEVENLIPLNVIDNKANSTQ
RMPVDFISNATTINLESYLYYDFKRGHKYKEVFKDENSFSEYWRGLYGAFSCPLFLKRLAEFENNRLDISHNLTASTSSL
ISLIKKDIKDGKVVSMDISSLSPACLIPLWKLIGEIFYFWFISTPVVKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42544; Mature: 42544

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKLDKSIVESVTKNPESQYLLLFLEKLAQTIAYGHHCVVSDRDTLEKIICLNDISLFS
CEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH
KTIFRKSLNKITFLGDFLAQDFAIRFIFVDNSFDFECDFSELFVVNLFDYKGSVTSIDRF
HHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHH
LGRSNLIVEDVDDIVVYNLVMESYKLFRGDNYNLDFVPVHGGGDRSHEVCSILYTTNYNV
HCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEECCCEE
FAICDSDKKHPQSNDGVTALKLIHFFESKKIRDRLHVLNCHEVENLIPLNVIDNKANSTQ
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCCCC
RMPVDFISNATTINLESYLYYDFKRGHKYKEVFKDENSFSEYWRGLYGAFSCPLFLKRLA
CCCHHHHCCCEEEEEHHEEEEEHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
EFENNRLDISHNLTASTSSLISLIKKDIKDGKVVSMDISSLSPACLIPLWKLIGEIFYFW
HHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHH
FISTPVVKL
HHCCCCCCC
>Mature Secondary Structure
MIIKLDKSIVESVTKNPESQYLLLFLEKLAQTIAYGHHCVVSDRDTLEKIICLNDISLFS
CEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH
KTIFRKSLNKITFLGDFLAQDFAIRFIFVDNSFDFECDFSELFVVNLFDYKGSVTSIDRF
HHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHH
LGRSNLIVEDVDDIVVYNLVMESYKLFRGDNYNLDFVPVHGGGDRSHEVCSILYTTNYNV
HCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEECCCEE
FAICDSDKKHPQSNDGVTALKLIHFFESKKIRDRLHVLNCHEVENLIPLNVIDNKANSTQ
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCCCC
RMPVDFISNATTINLESYLYYDFKRGHKYKEVFKDENSFSEYWRGLYGAFSCPLFLKRLA
CCCHHHHCCCEEEEEHHEEEEEHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
EFENNRLDISHNLTASTSSLISLIKKDIKDGKVVSMDISSLSPACLIPLWKLIGEIFYFW
HHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHH
FISTPVVKL
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA