Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597810

Identifier: 120597810

GI number: 120597810

Start: 1114711

End: 1116261

Strand: Direct

Name: 120597810

Synonym: Sputw3181_0980

Alternate gene names: NA

Gene position: 1114711-1116261 (Clockwise)

Preceding gene: 120597809

Following gene: 120597811

Centisome position: 23.68

GC content: 30.43

Gene sequence:

>1551_bases
ATGCAAAAAATAAAAGTAGAAGGTCTTAAGTCCCTTAGGGATAGTGGTGACTTTGAATTAAAGAAAATTAATATACTTGT
TGGAAACAATAGTTCGGGTAAAAGTACTTTTCTAAGGATATTTCCATTGCTCAGGCAAAGTGTTGAAAAGAAAACTCGAG
GGCCTATACTGTGGAATGGTTTATATATTGATTTTGGTTCTTTTGATACAGCAATTCATAAAAAATTTTTTAATGGTGAA
GTGAAGAATGAGGATGAACTATTTTTTACATTCCAACTTTCTTATAATAGGAAAAAGTATCATCACAGTTTTATTAATGA
AGAACCAGTGGAGTTGATATGTAAAATAGGCATGATGAGGTCTAATAGTGGTTTAAGTTGTTATACGGCAAGTTATCAAG
TTAAAATGTATAATCATACGATTTTTTTTAAGTTTGATGAGGATGGTGTGATTACTGATATTTCATCTGATAGGTTGTCA
TGGCCGTTAAAAAAACATGATTTAAAGTATCAGATAACTGATACTGATAATTTACTTCCGATTTTAATATCACCTTCTTC
AGGGTTGGTTGATGCAAAAGGCAAGCAAATAAGTACAGCATTATTCAATCAAGTTGTTCAGCTTTTTAAAAACTACTCAG
GTAGTTCGAGTAGTAACAAATTGCAAGCTATGGCTACAAGATTTTTACGAAATTCAGTTAATGATAATAATAAATTAGCT
TTGTTAAGGAAAATGAACTCAACTGCAAAGTGGGAAAAAGAAACATTAAGTTGGGATGTTAATTCAAAAAAGTTCAGATT
TATATCTGGTTTGGCTGATCTTTATTATCTTATAGAGAATAGTGCAAATATAAATGATTCTATGACCAATGAGTTGTTAG
GCGTTAGATATATTGCACCATTAAGAACTTCAACGGCAAGATATTATAGGCATCAAGATTTAAGTATCGACGAGTTAGAC
CATCGTGGGGATAATATAGGTATGTTTATATCTAATATTACTGGTAAGTGGAGGGAGGAACTTAATAAGTGGACAAAAAG
TGAATTTGGTTTTGTTATAAATGTAGATTTGAACTCTAATCATATATCAATTAATCTTCAGTATGCCGATTCAGATTTGA
GTGATAATATTTCTGATATGGGATTTGGTTTTTCACAAGTGTTACCTATTATTATTCAATTATGGGCAGTATCATCTGGA
TATGAAAATTCAAAAAGAAGTAGAAAAATAAATAGTTATATATTTGCGATTGAGCAACCTGAGTTACATTTGCATCCTAA
GATGCAGGCGTCGCTTTCAATTGTATTCATAAATGCAATTGAACTTGCAAATAATAATGGTATCGAACTTAAATTAATTA
TAGAAACTCATAGTGAATCAATAATATCTAAAATGGGTAATCTAATATCTAAAGGGAAAATCGCTAATGATATGATAGGG
GTTTCCCTTTTTGAACAAGATCGAGAAAGTCGAGAGACTAAAATAATTTCTGCAAATTTTGACCAAAACGGTTTTCTTAA
TAACTGGCCATTAGGTTTTTTTGATTATTAA

Upstream 100 bases:

>100_bases
ATGTATTCGGTTTATTACTGAATTGGTGACCGCTACAGATAAAGCATTAGGGTCAGATTAGATAGGTTTTAATAAATTTA
AATTTACTTTGGATTATTTG

Downstream 100 bases:

>100_bases
TAATATGATTATAAAACTAGATAAATCGATAGTCGAGTCGGTGACTAAAAATCCAGAATCACAATATTTATTACTTTTTT
TAGAAAAATTAGCGCAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MQKIKVEGLKSLRDSGDFELKKINILVGNNSSGKSTFLRIFPLLRQSVEKKTRGPILWNGLYIDFGSFDTAIHKKFFNGE
VKNEDELFFTFQLSYNRKKYHHSFINEEPVELICKIGMMRSNSGLSCYTASYQVKMYNHTIFFKFDEDGVITDISSDRLS
WPLKKHDLKYQITDTDNLLPILISPSSGLVDAKGKQISTALFNQVVQLFKNYSGSSSSNKLQAMATRFLRNSVNDNNKLA
LLRKMNSTAKWEKETLSWDVNSKKFRFISGLADLYYLIENSANINDSMTNELLGVRYIAPLRTSTARYYRHQDLSIDELD
HRGDNIGMFISNITGKWREELNKWTKSEFGFVINVDLNSNHISINLQYADSDLSDNISDMGFGFSQVLPIIIQLWAVSSG
YENSKRSRKINSYIFAIEQPELHLHPKMQASLSIVFINAIELANNNGIELKLIIETHSESIISKMGNLISKGKIANDMIG
VSLFEQDRESRETKIISANFDQNGFLNNWPLGFFDY

Sequences:

>Translated_516_residues
MQKIKVEGLKSLRDSGDFELKKINILVGNNSSGKSTFLRIFPLLRQSVEKKTRGPILWNGLYIDFGSFDTAIHKKFFNGE
VKNEDELFFTFQLSYNRKKYHHSFINEEPVELICKIGMMRSNSGLSCYTASYQVKMYNHTIFFKFDEDGVITDISSDRLS
WPLKKHDLKYQITDTDNLLPILISPSSGLVDAKGKQISTALFNQVVQLFKNYSGSSSSNKLQAMATRFLRNSVNDNNKLA
LLRKMNSTAKWEKETLSWDVNSKKFRFISGLADLYYLIENSANINDSMTNELLGVRYIAPLRTSTARYYRHQDLSIDELD
HRGDNIGMFISNITGKWREELNKWTKSEFGFVINVDLNSNHISINLQYADSDLSDNISDMGFGFSQVLPIIIQLWAVSSG
YENSKRSRKINSYIFAIEQPELHLHPKMQASLSIVFINAIELANNNGIELKLIIETHSESIISKMGNLISKGKIANDMIG
VSLFEQDRESRETKIISANFDQNGFLNNWPLGFFDY
>Mature_516_residues
MQKIKVEGLKSLRDSGDFELKKINILVGNNSSGKSTFLRIFPLLRQSVEKKTRGPILWNGLYIDFGSFDTAIHKKFFNGE
VKNEDELFFTFQLSYNRKKYHHSFINEEPVELICKIGMMRSNSGLSCYTASYQVKMYNHTIFFKFDEDGVITDISSDRLS
WPLKKHDLKYQITDTDNLLPILISPSSGLVDAKGKQISTALFNQVVQLFKNYSGSSSSNKLQAMATRFLRNSVNDNNKLA
LLRKMNSTAKWEKETLSWDVNSKKFRFISGLADLYYLIENSANINDSMTNELLGVRYIAPLRTSTARYYRHQDLSIDELD
HRGDNIGMFISNITGKWREELNKWTKSEFGFVINVDLNSNHISINLQYADSDLSDNISDMGFGFSQVLPIIIQLWAVSSG
YENSKRSRKINSYIFAIEQPELHLHPKMQASLSIVFINAIELANNNGIELKLIIETHSESIISKMGNLISKGKIANDMIG
VSLFEQDRESRETKIISANFDQNGFLNNWPLGFFDY

Specific function: Unknown

COG id: COG4938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59050; Mature: 59050

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIKVEGLKSLRDSGDFELKKINILVGNNSSGKSTFLRIFPLLRQSVEKKTRGPILWNG
CCCEEHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
LYIDFGSFDTAIHKKFFNGEVKNEDELFFTFQLSYNRKKYHHSFINEEPVELICKIGMMR
EEEECCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHCCCCCHHHHHHHHCCEE
SNSGLSCYTASYQVKMYNHTIFFKFDEDGVITDISSDRLSWPLKKHDLKYQITDTDNLLP
CCCCCEEEEEEEEEEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCCEEE
ILISPSSGLVDAKGKQISTALFNQVVQLFKNYSGSSSSNKLQAMATRFLRNSVNDNNKLA
EEECCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE
LLRKMNSTAKWEKETLSWDVNSKKFRFISGLADLYYLIENSANINDSMTNELLGVRYIAP
EEEECCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCEEEECC
LRTSTARYYRHQDLSIDELDHRGDNIGMFISNITGKWREELNKWTKSEFGFVINVDLNSN
CCHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEECCC
HISINLQYADSDLSDNISDMGFGFSQVLPIIIQLWAVSSGYENSKRSRKINSYIFAIEQP
EEEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHCEEEEEEEEEECC
ELHLHPKMQASLSIVFINAIELANNNGIELKLIIETHSESIISKMGNLISKGKIANDMIG
CEEECCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHH
VSLFEQDRESRETKIISANFDQNGFLNNWPLGFFDY
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQKIKVEGLKSLRDSGDFELKKINILVGNNSSGKSTFLRIFPLLRQSVEKKTRGPILWNG
CCCEEHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
LYIDFGSFDTAIHKKFFNGEVKNEDELFFTFQLSYNRKKYHHSFINEEPVELICKIGMMR
EEEECCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHCCCCCHHHHHHHHCCEE
SNSGLSCYTASYQVKMYNHTIFFKFDEDGVITDISSDRLSWPLKKHDLKYQITDTDNLLP
CCCCCEEEEEEEEEEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCCEEE
ILISPSSGLVDAKGKQISTALFNQVVQLFKNYSGSSSSNKLQAMATRFLRNSVNDNNKLA
EEECCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE
LLRKMNSTAKWEKETLSWDVNSKKFRFISGLADLYYLIENSANINDSMTNELLGVRYIAP
EEEECCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCEEEECC
LRTSTARYYRHQDLSIDELDHRGDNIGMFISNITGKWREELNKWTKSEFGFVINVDLNSN
CCHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEECCC
HISINLQYADSDLSDNISDMGFGFSQVLPIIIQLWAVSSGYENSKRSRKINSYIFAIEQP
EEEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHCEEEEEEEEEECC
ELHLHPKMQASLSIVFINAIELANNNGIELKLIIETHSESIISKMGNLISKGKIANDMIG
CEEECCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHH
VSLFEQDRESRETKIISANFDQNGFLNNWPLGFFDY
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA