| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is purP [H]
Identifier: 120597800
GI number: 120597800
Start: 1102211
End: 1103500
Strand: Direct
Name: purP [H]
Synonym: Sputw3181_0970
Alternate gene names: 120597800
Gene position: 1102211-1103500 (Clockwise)
Preceding gene: 120597799
Following gene: 120597801
Centisome position: 23.41
GC content: 46.28
Gene sequence:
>1290_bases ATGTTAGAAAAGCTGTTCAAACTAAAACAAAATCAAACGAGCCTCAAGCAGGAAGCTATTGCAGGTTTAACCACATTTAT GACGATGGCCTACATCATTTTTGTCAATCCAATGATGTTAGCCGATGCAGGCATGGACCACGGGGCAGTATTTGTTGCCA CCTGCCTTGCAGCAGCAATTGGTTGTTTAGTCATGGGATTAATGGCTAATTATCCGATTGCATTAGCACCGGGAATGGGG CTTAACGCCTTTTTCACTTACACGGTTGTGGGTGAAATGGGTTATAGCTGGGAGACAGCCTTAGGTGCCGTGTTCCTATC GGGAATTTGCTTTTTAATCTTGTCCTTAGTGCGTATTCGTGAATGGATTGTTAACAGCATTCCCGTGTCGTTACGCCTAG GTATTGCCGCTGGTATTGGTTTATTTCTTGCGCTGATTGGTCTTAAAAGTGCGGGCATTGTTGTTGCTAATCCTGCGACC TTAGTCACTATGGGTGATATTACTACTTTTCCGGCCGTAATGGCAGTATTGGGCTTTTTCCTGATTATTGCCATGGTGCA AAGGGGAATGAAGTCGGCGGTAATTTTAAGCATCTTAATTATCACCGGACTTGGATTGATCTTTGGTGATGTGCATTACA ACGGCATAGTGTCTATGCCGCCTTCAATTGCCCCGACCTTTATGAAGATGGATTTATCCCAAGTCTTTGAAGTCACGATG CTATCAGTCGTGTTTGCCTTCTTGTTTGTGGATTTATTTGATACATCAGGCACCTTAGTTGCGGTTGCCCAACGCGGTGG TTTTCTCGATGAGAAAGGTCGTTTACCTCGTTTAAATCGTGCTTTGACCGCAGACAGTTTAGCCACTATCGCTGGTGCCG CTTGTGGTACTTCCACCACGACAAGCTATATCGAAAGTACCGCGGGAGTGAGTGCGGGAGGGCGTACAGGATTAACCGCT GTGGTGGTGGGATTATTGTTTATTGCTGCATTGTTCCTATCGCCATTGGCGGGGATGATTCCGGCCTATGCAACAGCGGG CACCCTGTTTTATGTGGCTATTTTAATGATGTCTGGCCTTGTGCATGTTGAGTGGGAAGATTTAACTGAAGCCGCGCCTG TGGTGGTGGTGTGTATCTTAATGCCGCTGACGTTCTCTATTGCATCGGGGATTGCGCTGGGGATTATCTCCTATGCGGCG ATTAAAATACTCACGGGTCGCTTTAGCGATCTCAATGTGGGTATCATCGTGTTAGCGGCATTATTTGTGGCTAAGTTTGT CTATGCTTGA
Upstream 100 bases:
>100_bases ACCAGCCTAAACTCCTTATAATCTGCCGCAAATGTAATCGCGCTACATATTCCTTACATTTAAATACCCTACCTACTTAA AATAAAAGGAACCCAGTTCC
Downstream 100 bases:
>100_bases TGCTGTTTAATCGTGAGCTAGCCTAGTGGGTTAGATTGTCTACAATAGGCAATATTTTTTGAGGGTCATCTAATCGATGG CCCTTTTTACTGCGTGATTA
Product: xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAIGCLVMGLMANYPIALAPGMG LNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIREWIVNSIPVSLRLGIAAGIGLFLALIGLKSAGIVVANPAT LVTMGDITTFPAVMAVLGFFLIIAMVQRGMKSAVILSILIITGLGLIFGDVHYNGIVSMPPSIAPTFMKMDLSQVFEVTM LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAACGTSTTTSYIESTAGVSAGGRTGLTA VVVGLLFIAALFLSPLAGMIPAYATAGTLFYVAILMMSGLVHVEWEDLTEAAPVVVVCILMPLTFSIASGIALGIISYAA IKILTGRFSDLNVGIIVLAALFVAKFVYA
Sequences:
>Translated_429_residues MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAIGCLVMGLMANYPIALAPGMG LNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIREWIVNSIPVSLRLGIAAGIGLFLALIGLKSAGIVVANPAT LVTMGDITTFPAVMAVLGFFLIIAMVQRGMKSAVILSILIITGLGLIFGDVHYNGIVSMPPSIAPTFMKMDLSQVFEVTM LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAACGTSTTTSYIESTAGVSAGGRTGLTA VVVGLLFIAALFLSPLAGMIPAYATAGTLFYVAILMMSGLVHVEWEDLTEAAPVVVVCILMPLTFSIASGIALGIISYAA IKILTGRFSDLNVGIIVLAALFVAKFVYA >Mature_429_residues MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAIGCLVMGLMANYPIALAPGMG LNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIREWIVNSIPVSLRLGIAAGIGLFLALIGLKSAGIVVANPAT LVTMGDITTFPAVMAVLGFFLIIAMVQRGMKSAVILSILIITGLGLIFGDVHYNGIVSMPPSIAPTFMKMDLSQVFEVTM LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAACGTSTTTSYIESTAGVSAGGRTGLTA VVVGLLFIAALFLSPLAGMIPAYATAGTLFYVAILMMSGLVHVEWEDLTEAAPVVVVCILMPLTFSIASGIALGIISYAA IKILTGRFSDLNVGIIVLAALFVAKFVYA
Specific function: High-affinity uptake of adenine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=428, Percent_Identity=53.0373831775701, Blast_Score=464, Evalue=1e-132, Organism=Escherichia coli, GI87082309, Length=426, Percent_Identity=50, Blast_Score=457, Evalue=1e-130, Organism=Escherichia coli, GI1790499, Length=430, Percent_Identity=38.3720930232558, Blast_Score=284, Evalue=8e-78, Organism=Escherichia coli, GI48994909, Length=432, Percent_Identity=38.1944444444444, Blast_Score=265, Evalue=5e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 45014; Mature: 45014
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAI CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GCLVMGLMANYPIALAPGMGLNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIR HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EWIVNSIPVSLRLGIAAGIGLFLALIGLKSAGIVVANPATLVTMGDITTFPAVMAVLGFF HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCHHHHHHHHHHHHHH LIIAMVQRGMKSAVILSILIITGLGLIFGDVHYNGIVSMPPSIAPTFMKMDLSQVFEVTM HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHH LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAACGTSTT HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH TSYIESTAGVSAGGRTGLTAVVVGLLFIAALFLSPLAGMIPAYATAGTLFYVAILMMSGL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VHVEWEDLTEAAPVVVVCILMPLTFSIASGIALGIISYAAIKILTGRFSDLNVGIIVLAA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LFVAKFVYA HHHHHHHCC >Mature Secondary Structure MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAI CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GCLVMGLMANYPIALAPGMGLNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIR HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EWIVNSIPVSLRLGIAAGIGLFLALIGLKSAGIVVANPATLVTMGDITTFPAVMAVLGFF HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCHHHHHHHHHHHHHH LIIAMVQRGMKSAVILSILIITGLGLIFGDVHYNGIVSMPPSIAPTFMKMDLSQVFEVTM HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHH LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAACGTSTT HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH TSYIESTAGVSAGGRTGLTAVVVGLLFIAALFLSPLAGMIPAYATAGTLFYVAILMMSGL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VHVEWEDLTEAAPVVVVCILMPLTFSIASGIALGIISYAAIKILTGRFSDLNVGIIVLAA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LFVAKFVYA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]