| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is proB [H]
Identifier: 120597801
GI number: 120597801
Start: 1103702
End: 1104820
Strand: Direct
Name: proB [H]
Synonym: Sputw3181_0971
Alternate gene names: 120597801
Gene position: 1103702-1104820 (Clockwise)
Preceding gene: 120597800
Following gene: 120597802
Centisome position: 23.44
GC content: 48.26
Gene sequence:
>1119_bases ATGAACTTAAGTGAGATTGCGTATCGCCGCGTGGTAGTGAAATTGGGAACGAGTGTGCTGACCTCTGGCAGTAAACAGCT AGATAAAGCCCATATGGTTGAGCTGGCTCGTCAAATGGCTGCACTGATGAAGTCAGGGGTCGAAGTCGTTTTATGCACTT CAGGGGCAATTGCCGCTGGGCGTGAACATCTCCAATACCCGACACTGCCCGACACTATGGCCAATAAGCAATTGTTAGCC GCTGTCGGGCAAAGTCAGTTGATCCTCGCTTGGGCACAACTCTTTAGTATTTATGGGCTGCATGTGGGCCAACTCTTGCT AACCCGCGCCGACTTGCAGGATAGAGAACGTTATCTCAATGCTAGAGATACACTCAATGCATTGTTAGCAAATAATATTA TCCCGATCATTAATGAAAATGATGCCGTGGCTACCAATGAGATTAAAGTCGGTGATAATGACAATTTATCGGCCCGCGCG GCGCTGCTGTGTGATGCTGATTTATTGATTTTATTGACGGATCAAAAGGGGTTGTTCGATGCCGATCCGCGCACTAATCC GAATGCTAAATTGATTTCGCAGGTGGTGAAGATTGATGACAGTCTGCGGATGTTAGCGGGGGGGTCTGTATCGGGTTTAG GTACGGGCGGTATGTCGACTAAACTGGAAGCGGCGGATATTGCTCGCCGTGCAGGGATTGAGGTGGTGATTGCCTCTGGT CATCACCCCGATGTGATTAAAAAAGTGGTTGGTAAAGAGTCCGTTGGTACTCACTTTAGTGCCATTGAAAACCCGCTCGA AAGCCGTAAACAGTGGATATTGGCGGGCCCTGCGACTCAAGGCTCTTTAGTGCTCGATGCTGGCGCGGTAAAAGCCGTTA CCGATAAGGGCCGTAGCTTATTATCTAAAGGTATTATTGGGGTTAAGGGCGAATTTGAGCGCGGCGCAACACTGAAATTA GTTGACCAACAAGGTAAAGTAATTGCTAAGGGGATAACGAGGTATTGTGGTCAAGCCTTGAATTTGATTGCGGGTAAACA TTCCGACGAGATCGAGTCAGTACTCGGTTACGATTATGGTGACGCAATAGTGCACCGAAACGACATGGTGGTCCTATAA
Upstream 100 bases:
>100_bases GAGCAAAATCGAAAATTTATCTCGAGTTAATCACTCCTCGCTACCAATTATCTAGCGGATTAGGTATAAGGATTGTTCGG TTATTTTTTACAAATGAATA
Downstream 100 bases:
>100_bases GCGAGGTCTGTTTTGAGTGAAATGAATCAAGCGCAGTATTTACAGCAACTTGGCGCTAATGCCAAACAGGCAAGTTATGC CTTAGCCAACTTAACGGCGA
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK [H]
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MNLSEIAYRRVVVKLGTSVLTSGSKQLDKAHMVELARQMAALMKSGVEVVLCTSGAIAAGREHLQYPTLPDTMANKQLLA AVGQSQLILAWAQLFSIYGLHVGQLLLTRADLQDRERYLNARDTLNALLANNIIPIINENDAVATNEIKVGDNDNLSARA ALLCDADLLILLTDQKGLFDADPRTNPNAKLISQVVKIDDSLRMLAGGSVSGLGTGGMSTKLEAADIARRAGIEVVIASG HHPDVIKKVVGKESVGTHFSAIENPLESRKQWILAGPATQGSLVLDAGAVKAVTDKGRSLLSKGIIGVKGEFERGATLKL VDQQGKVIAKGITRYCGQALNLIAGKHSDEIESVLGYDYGDAIVHRNDMVVL
Sequences:
>Translated_372_residues MNLSEIAYRRVVVKLGTSVLTSGSKQLDKAHMVELARQMAALMKSGVEVVLCTSGAIAAGREHLQYPTLPDTMANKQLLA AVGQSQLILAWAQLFSIYGLHVGQLLLTRADLQDRERYLNARDTLNALLANNIIPIINENDAVATNEIKVGDNDNLSARA ALLCDADLLILLTDQKGLFDADPRTNPNAKLISQVVKIDDSLRMLAGGSVSGLGTGGMSTKLEAADIARRAGIEVVIASG HHPDVIKKVVGKESVGTHFSAIENPLESRKQWILAGPATQGSLVLDAGAVKAVTDKGRSLLSKGIIGVKGEFERGATLKL VDQQGKVIAKGITRYCGQALNLIAGKHSDEIESVLGYDYGDAIVHRNDMVVL >Mature_372_residues MNLSEIAYRRVVVKLGTSVLTSGSKQLDKAHMVELARQMAALMKSGVEVVLCTSGAIAAGREHLQYPTLPDTMANKQLLA AVGQSQLILAWAQLFSIYGLHVGQLLLTRADLQDRERYLNARDTLNALLANNIIPIINENDAVATNEIKVGDNDNLSARA ALLCDADLLILLTDQKGLFDADPRTNPNAKLISQVVKIDDSLRMLAGGSVSGLGTGGMSTKLEAADIARRAGIEVVIASG HHPDVIKKVVGKESVGTHFSAIENPLESRKQWILAGPATQGSLVLDAGAVKAVTDKGRSLLSKGIIGVKGEFERGATLKL VDQQGKVIAKGITRYCGQALNLIAGKHSDEIESVLGYDYGDAIVHRNDMVVL
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline [H]
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
Organism=Homo sapiens, GI21361368, Length=296, Percent_Identity=35.472972972973, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI62912457, Length=294, Percent_Identity=35.3741496598639, Blast_Score=145, Evalue=4e-35, Organism=Escherichia coli, GI1786437, Length=360, Percent_Identity=63.0555555555556, Blast_Score=454, Evalue=1e-129, Organism=Caenorhabditis elegans, GI17569969, Length=267, Percent_Identity=34.8314606741573, Blast_Score=137, Evalue=9e-33, Organism=Caenorhabditis elegans, GI17569967, Length=267, Percent_Identity=34.8314606741573, Blast_Score=137, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6320506, Length=415, Percent_Identity=35.6626506024096, Blast_Score=209, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6321822, Length=411, Percent_Identity=34.5498783454988, Blast_Score=207, Evalue=2e-54, Organism=Drosophila melanogaster, GI21357643, Length=317, Percent_Identity=33.7539432176656, Blast_Score=137, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 [H]
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA [H]
EC number: =2.7.2.11 [H]
Molecular weight: Translated: 39670; Mature: 39670
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS50890 PUA ; PS00902 GLUTAMATE_5_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSEIAYRRVVVKLGTSVLTSGSKQLDKAHMVELARQMAALMKSGVEVVLCTSGAIAAG CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHC REHLQYPTLPDTMANKQLLAAVGQSQLILAWAQLFSIYGLHVGQLLLTRADLQDRERYLN HHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC ARDTLNALLANNIIPIINENDAVATNEIKVGDNDNLSARAALLCDADLLILLTDQKGLFD HHHHHHHHHHCCCEEEECCCCCEEECEEEECCCCCCCCEEEEEECCCEEEEEECCCCCCC ADPRTNPNAKLISQVVKIDDSLRMLAGGSVSGLGTGGMSTKLEAADIARRAGIEVVIASG CCCCCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECC HHPDVIKKVVGKESVGTHFSAIENPLESRKQWILAGPATQGSLVLDAGAVKAVTDKGRSL CCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCHHHHHHHHHHH LSKGIIGVKGEFERGATLKLVDQQGKVIAKGITRYCGQALNLIAGKHSDEIESVLGYDYG HHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC DAIVHRNDMVVL CCEEECCCEEEC >Mature Secondary Structure MNLSEIAYRRVVVKLGTSVLTSGSKQLDKAHMVELARQMAALMKSGVEVVLCTSGAIAAG CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHC REHLQYPTLPDTMANKQLLAAVGQSQLILAWAQLFSIYGLHVGQLLLTRADLQDRERYLN HHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC ARDTLNALLANNIIPIINENDAVATNEIKVGDNDNLSARAALLCDADLLILLTDQKGLFD HHHHHHHHHHCCCEEEECCCCCEEECEEEECCCCCCCCEEEEEECCCEEEEEECCCCCCC ADPRTNPNAKLISQVVKIDDSLRMLAGGSVSGLGTGGMSTKLEAADIARRAGIEVVIASG CCCCCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECC HHPDVIKKVVGKESVGTHFSAIENPLESRKQWILAGPATQGSLVLDAGAVKAVTDKGRSL CCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCHHHHHHHHHHH LSKGIIGVKGEFERGATLKLVDQQGKVIAKGITRYCGQALNLIAGKHSDEIESVLGYDYG HHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC DAIVHRNDMVVL CCEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]