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The map label for this gene is glpD [H]

Identifier: 120597720

GI number: 120597720

Start: 1010382

End: 1011557

Strand: Direct

Name: glpD [H]

Synonym: Sputw3181_0890

Alternate gene names: 120597720

Gene position: 1010382-1011557 (Clockwise)

Preceding gene: 120597719

Following gene: 120597721

Centisome position: 21.46

GC content: 47.02

Gene sequence:

>1176_bases
ATGGCTTCTTTTGATATCGCCATTATTGGTGGCGGGATTAGCGGCGTAGGCATTGCCCAATATGCGGCAGCAGCAGGCTA
TTCGACGCTCTTAATTGAAAAAGGGGAAATTGGTGGGCAAACTTCGGCTAACTCCAGCAAGCTTATCCACGGTGGTTTGC
GTTATTTAGAAACCGGGCAAATTAACTTAGTTCGTAAGTCTTTGCTTGAGCGGCGTAATCTCCTCAAGTTTGCGCCTACC
CTCGTCAAAGCTGTTCCTTTTTACATTCCTGTCTATGACGACAGTCAACGAAGTCCCTTAACGATACGGGCTGGCCTGAG
TTTGTATGCGCTTTTGAGTGAGTTCGATGCCTTGGGGCAATTTAAATCCGTTCCCGCCGTGCATTGGCACCGTTTTAAGG
GGTTAAAACTTTCAGGATTAAAAGCGGTATTCCAATATTGGGATGCGCAGACCGATGATAAATTGTTGACCCAAGCTGTA
GCGCGCAGTGCTCAAACTCTGGGTGCCGAGGTTTATGCCGAAGCCGAGTTTTTATGGCTCGAGCATCAAGCTCAATGTTG
TCAGTTGAGTTTTCGTCATAGAGGCGATATTCAGCAAGTGCAGGCGAGTTTAGTGATCAATGCTGCAGGCCCTTGGGTGA
ATGAGGTCATCGCTAAAGTGTCGCCTCCGTTGGCGGGTGTTGAGCTCGACTGGGTGCAAGGGGCCCATCTGTTACTCGAT
ATCCCCGCACCCGATGGTATTTTATACCTTGAGTCTTGTTTCGATAAACGGGTCATTTTTGTGATGCCTTGGTATGGTAA
GACCTTGGTTGGCACGACGGAAACTCAACTTAGCTCATTAGATGAACCTCTAAAAGTGACTGAATCTGAGGTGAATTATC
TCCTCGGTATCTATAGGTATTATTTCCCACTGGCACCTGACATCAAAGCACTTAACGCGAAGATAATCGGCACATTTTGT
GGTGTAAGAGTCTTACCTAAACAAACTGGTCATGCTTTTGAGCGCCCGCGGGACACCTTGATGCAAACATCACGATCCCA
TCCACGTATCTTAAGTTTATATGGCGGTAAGTTAACGACTTTTCGAAGTTCCTCTGAAGAAGTGCTTGAATGGATTGAGC
GTGCTATAGGTAAACGTCAACCTATCGCCGATGTTGACTCACTCACTTTGAGCTGA

Upstream 100 bases:

>100_bases
ATTCAACCGATTGCCATATTAAAGCCTAACGGCGACAAAGCATCATCAAGGTGTAACGTATGGATGCGTTGGTTATGGCA
GCATTATTTAGGGGATATTT

Downstream 100 bases:

>100_bases
ATCGCGTGACTTTGGGTGATTTTTACCTGTAAAAACGCTACAGTGTGGCGCTTTTTATTGATATCTAGGAACTGCTGTGA
GCGCTGTTATTGTAAATACC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MASFDIAIIGGGISGVGIAQYAAAAGYSTLLIEKGEIGGQTSANSSKLIHGGLRYLETGQINLVRKSLLERRNLLKFAPT
LVKAVPFYIPVYDDSQRSPLTIRAGLSLYALLSEFDALGQFKSVPAVHWHRFKGLKLSGLKAVFQYWDAQTDDKLLTQAV
ARSAQTLGAEVYAEAEFLWLEHQAQCCQLSFRHRGDIQQVQASLVINAAGPWVNEVIAKVSPPLAGVELDWVQGAHLLLD
IPAPDGILYLESCFDKRVIFVMPWYGKTLVGTTETQLSSLDEPLKVTESEVNYLLGIYRYYFPLAPDIKALNAKIIGTFC
GVRVLPKQTGHAFERPRDTLMQTSRSHPRILSLYGGKLTTFRSSSEEVLEWIERAIGKRQPIADVDSLTLS

Sequences:

>Translated_391_residues
MASFDIAIIGGGISGVGIAQYAAAAGYSTLLIEKGEIGGQTSANSSKLIHGGLRYLETGQINLVRKSLLERRNLLKFAPT
LVKAVPFYIPVYDDSQRSPLTIRAGLSLYALLSEFDALGQFKSVPAVHWHRFKGLKLSGLKAVFQYWDAQTDDKLLTQAV
ARSAQTLGAEVYAEAEFLWLEHQAQCCQLSFRHRGDIQQVQASLVINAAGPWVNEVIAKVSPPLAGVELDWVQGAHLLLD
IPAPDGILYLESCFDKRVIFVMPWYGKTLVGTTETQLSSLDEPLKVTESEVNYLLGIYRYYFPLAPDIKALNAKIIGTFC
GVRVLPKQTGHAFERPRDTLMQTSRSHPRILSLYGGKLTTFRSSSEEVLEWIERAIGKRQPIADVDSLTLS
>Mature_390_residues
ASFDIAIIGGGISGVGIAQYAAAAGYSTLLIEKGEIGGQTSANSSKLIHGGLRYLETGQINLVRKSLLERRNLLKFAPTL
VKAVPFYIPVYDDSQRSPLTIRAGLSLYALLSEFDALGQFKSVPAVHWHRFKGLKLSGLKAVFQYWDAQTDDKLLTQAVA
RSAQTLGAEVYAEAEFLWLEHQAQCCQLSFRHRGDIQQVQASLVINAAGPWVNEVIAKVSPPLAGVELDWVQGAHLLLDI
PAPDGILYLESCFDKRVIFVMPWYGKTLVGTTETQLSSLDEPLKVTESEVNYLLGIYRYYFPLAPDIKALNAKIIGTFCG
VRVLPKQTGHAFERPRDTLMQTSRSHPRILSLYGGKLTTFRSSSEEVLEWIERAIGKRQPIADVDSLTLS

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=399, Percent_Identity=29.5739348370927, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI285002231, Length=399, Percent_Identity=29.5739348370927, Blast_Score=143, Evalue=3e-34,
Organism=Escherichia coli, GI2367226, Length=354, Percent_Identity=32.2033898305085, Blast_Score=142, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI115534726, Length=384, Percent_Identity=29.6875, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17509253, Length=386, Percent_Identity=28.7564766839378, Blast_Score=117, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6322036, Length=400, Percent_Identity=26.5, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI161077125, Length=391, Percent_Identity=28.6445012787724, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24653942, Length=391, Percent_Identity=28.6445012787724, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24653944, Length=391, Percent_Identity=28.6445012787724, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI20130025, Length=391, Percent_Identity=28.6445012787724, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24586295, Length=393, Percent_Identity=28.7531806615776, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI19921278, Length=224, Percent_Identity=33.0357142857143, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 43156; Mature: 43025

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFDIAIIGGGISGVGIAQYAAAAGYSTLLIEKGEIGGQTSANSSKLIHGGLRYLETGQ
CCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCHHHHCCCC
INLVRKSLLERRNLLKFAPTLVKAVPFYIPVYDDSQRSPLTIRAGLSLYALLSEFDALGQ
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHH
FKSVPAVHWHRFKGLKLSGLKAVFQYWDAQTDDKLLTQAVARSAQTLGAEVYAEAEFLWL
HHCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHEECEEEEEE
EHQAQCCQLSFRHRGDIQQVQASLVINAAGPWVNEVIAKVSPPLAGVELDWVQGAHLLLD
HHHHHHHHHHHHCCCCHHHHHHHEEEECCCCHHHHHHHHCCCCCCCCEEEEECCCEEEEE
IPAPDGILYLESCFDKRVIFVMPWYGKTLVGTTETQLSSLDEPLKVTESEVNYLLGIYRY
CCCCCCEEEEEHHHCCCEEEEECCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
YFPLAPDIKALNAKIIGTFCGVRVLPKQTGHAFERPRDTLMQTSRSHPRILSLYGGKLTT
HCCCCCCHHHHHHHHEEHHHCCEEECCCCCCHHCCHHHHHHHHCCCCCEEEEECCCEEEE
FRSSSEEVLEWIERAIGKRQPIADVDSLTLS
ECCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASFDIAIIGGGISGVGIAQYAAAAGYSTLLIEKGEIGGQTSANSSKLIHGGLRYLETGQ
CCEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCHHHHCCCC
INLVRKSLLERRNLLKFAPTLVKAVPFYIPVYDDSQRSPLTIRAGLSLYALLSEFDALGQ
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHH
FKSVPAVHWHRFKGLKLSGLKAVFQYWDAQTDDKLLTQAVARSAQTLGAEVYAEAEFLWL
HHCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHEECEEEEEE
EHQAQCCQLSFRHRGDIQQVQASLVINAAGPWVNEVIAKVSPPLAGVELDWVQGAHLLLD
HHHHHHHHHHHHCCCCHHHHHHHEEEECCCCHHHHHHHHCCCCCCCCEEEEECCCEEEEE
IPAPDGILYLESCFDKRVIFVMPWYGKTLVGTTETQLSSLDEPLKVTESEVNYLLGIYRY
CCCCCCEEEEEHHHCCCEEEEECCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
YFPLAPDIKALNAKIIGTFCGVRVLPKQTGHAFERPRDTLMQTSRSHPRILSLYGGKLTT
HCCCCCCHHHHHHHHEEHHHCCEEECCCCCCHHCCHHHHHHHHCCCCCEEEEECCCEEEE
FRSSSEEVLEWIERAIGKRQPIADVDSLTLS
ECCCHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]