| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is cysH [H]
Identifier: 120597713
GI number: 120597713
Start: 1003034
End: 1003816
Strand: Direct
Name: cysH [H]
Synonym: Sputw3181_0883
Alternate gene names: 120597713
Gene position: 1003034-1003816 (Clockwise)
Preceding gene: 120597712
Following gene: 120597714
Centisome position: 21.3
GC content: 48.4
Gene sequence:
>783_bases ATGGCTGATCTTGAGCATAAAACCAGTGATACAGTGCCGACAGTGGTCAGCGCTGCCGAACTCAAGGCATTATTGAGTGC GCCTAAGGCTGAGCAAGCGATAGAGCTTGAACGTATTAATCAGTTCTTAGGTGGATTGAGCGCGCAAGAGCGAGTGCTAT GGGGCTTAACTTATTTGCCCGGTAATCATGCTCTGTCCTCAAGTTTTGGGATCCAAGCCGCTGTAATGCTGCATATGGTG AGTCAGGCACAGGCGAATATTCCGGTTATCCTCACGGATACGGGTTATTTATTCCCTGAGACTTATCAGTTTATCGACGA GCTGACAGAGCGTTTATCGCTGAATTTAAAAGTGTACCAAGCAGTGATGACATCGGCATGGCAAGAGGCACGCTTTGGTC AGTTGTGGGAGCAAGGGTTAGACGGGCTAGAGCAATACAACCGTTTAAACAAAGTTGAGCCTATGCAACGCGCCTTAGCC GAGCTTGAAGTCGGCACTTGGTTTGCGGGGCTTAGACGCAGTCAAGCCAGTACCCGTGAGGCGCTGCCGATATTAGCTAT CCATGGCACACGCTTTAAGTTACTGCCAATTATCGAATGGTCGAATAAAGATGTGCACCTCTATTTGACGCAATTTGACT TACCGTACCATCCACTTTGGGAGCAAGGCTATGTTTCTGTGGGGGATACCCATTCGAGTAAACCACTCGAATTAGGCATG ACGGAGGAAGAAACCCGCTTTAATGGCCTAAAACGTGAGTGTGGTCTGCACTACGAAATCTAA
Upstream 100 bases:
>100_bases GGCCGCTACGCCGTTGAGCGTGATGCTGGCGAAACCTTTGGTAACTTCACTGTCCGCGTGGGCGTAGTGAAGGCGGTGAT CGATGCCGCTAAGGATTTTC
Downstream 100 bases:
>100_bases CTATCTTATTGAGTTAAAAACTTAACACCTCGATTTTGCTCGGGGTGTTTTTATTTATGGTCTTTTATTGTTTGATTTTG AAGCGAATTAATAGTTACAA
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MADLEHKTSDTVPTVVSAAELKALLSAPKAEQAIELERINQFLGGLSAQERVLWGLTYLPGNHALSSSFGIQAAVMLHMV SQAQANIPVILTDTGYLFPETYQFIDELTERLSLNLKVYQAVMTSAWQEARFGQLWEQGLDGLEQYNRLNKVEPMQRALA ELEVGTWFAGLRRSQASTREALPILAIHGTRFKLLPIIEWSNKDVHLYLTQFDLPYHPLWEQGYVSVGDTHSSKPLELGM TEEETRFNGLKRECGLHYEI
Sequences:
>Translated_260_residues MADLEHKTSDTVPTVVSAAELKALLSAPKAEQAIELERINQFLGGLSAQERVLWGLTYLPGNHALSSSFGIQAAVMLHMV SQAQANIPVILTDTGYLFPETYQFIDELTERLSLNLKVYQAVMTSAWQEARFGQLWEQGLDGLEQYNRLNKVEPMQRALA ELEVGTWFAGLRRSQASTREALPILAIHGTRFKLLPIIEWSNKDVHLYLTQFDLPYHPLWEQGYVSVGDTHSSKPLELGM TEEETRFNGLKRECGLHYEI >Mature_259_residues ADLEHKTSDTVPTVVSAAELKALLSAPKAEQAIELERINQFLGGLSAQERVLWGLTYLPGNHALSSSFGIQAAVMLHMVS QAQANIPVILTDTGYLFPETYQFIDELTERLSLNLKVYQAVMTSAWQEARFGQLWEQGLDGLEQYNRLNKVEPMQRALAE LEVGTWFAGLRRSQASTREALPILAIHGTRFKLLPIIEWSNKDVHLYLTQFDLPYHPLWEQGYVSVGDTHSSKPLELGMT EEETRFNGLKRECGLHYEI
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=242, Percent_Identity=60.7438016528926, Blast_Score=313, Evalue=5e-87, Organism=Saccharomyces cerevisiae, GI6325425, Length=241, Percent_Identity=31.5352697095436, Blast_Score=105, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR011800 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 29359; Mature: 29228
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLEHKTSDTVPTVVSAAELKALLSAPKAEQAIELERINQFLGGLSAQERVLWGLTYLP CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHEEEEECC GNHALSSSFGIQAAVMLHMVSQAQANIPVILTDTGYLFPETYQFIDELTERLSLNLKVYQ CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHH AVMTSAWQEARFGQLWEQGLDGLEQYNRLNKVEPMQRALAELEVGTWFAGLRRSQASTRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALPILAIHGTRFKLLPIIEWSNKDVHLYLTQFDLPYHPLWEQGYVSVGDTHSSKPLELGM CCEEEEECCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCEEECC TEEETRFNGLKRECGLHYEI CCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ADLEHKTSDTVPTVVSAAELKALLSAPKAEQAIELERINQFLGGLSAQERVLWGLTYLP CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHEEEEECC GNHALSSSFGIQAAVMLHMVSQAQANIPVILTDTGYLFPETYQFIDELTERLSLNLKVYQ CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHH AVMTSAWQEARFGQLWEQGLDGLEQYNRLNKVEPMQRALAELEVGTWFAGLRRSQASTRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALPILAIHGTRFKLLPIIEWSNKDVHLYLTQFDLPYHPLWEQGYVSVGDTHSSKPLELGM CCEEEEECCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCEEECC TEEETRFNGLKRECGLHYEI CCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]