| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597660
Identifier: 120597660
GI number: 120597660
Start: 933015
End: 933137
Strand: Direct
Name: 120597660
Synonym: Sputw3181_0829
Alternate gene names: NA
Gene position: 933015-933137 (Clockwise)
Preceding gene: 120597659
Following gene: 120597661
Centisome position: 19.82
GC content: 44.72
Gene sequence:
>123_bases TTGTGTGGCGATGATGCCTATTCTGGAAAAAATTATGACCATCTCCGCGCTTGGGTAGAATCGTTACTGTTTGAACTCGA AGCGGTTTTTGCTATTGATGTGGCCGCCTTTGCACTCTTGTAA
Upstream 100 bases:
>100_bases TAAACAAGGAGGTTTGTATGCCGCGCCCTCGCAGAACTCAGATAAGTCTTGAAGACACACCTTATTATCATTGCTGTAGC CGCGTTGTTCGGCGTGCCTT
Downstream 100 bases:
>100_bases ATGAACGGGAGGGTCGAATCATCTCCATGTGGTGCAGCGGGTCGATATCGACAGCGCGAATCGTTGGACTGACCACGAAG TACTTGAGCAGTGGCATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 40; Mature: 40
Protein sequence:
>40_residues MCGDDAYSGKNYDHLRAWVESLLFELEAVFAIDVAAFALL
Sequences:
>Translated_40_residues MCGDDAYSGKNYDHLRAWVESLLFELEAVFAIDVAAFALL >Mature_40_residues MCGDDAYSGKNYDHLRAWVESLLFELEAVFAIDVAAFALL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4465; Mature: 4465
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGDDAYSGKNYDHLRAWVESLLFELEAVFAIDVAAFALL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MCGDDAYSGKNYDHLRAWVESLLFELEAVFAIDVAAFALL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA