Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597661

Identifier: 120597661

GI number: 120597661

Start: 933316

End: 933939

Strand: Direct

Name: 120597661

Synonym: Sputw3181_0831

Alternate gene names: NA

Gene position: 933316-933939 (Clockwise)

Preceding gene: 120597660

Following gene: 120597662

Centisome position: 19.82

GC content: 45.19

Gene sequence:

>624_bases
ATGCAATTGCCATTTATCGCAGTCGATTATGTGATATCAGTTGGTTTATGCGCTGCCTCAACGAACCCATCGCAAGACAA
ACGAATCAAGAAGATAACTGTACAGGTCGTTTCTGGGAAGGGCGATTTACCTATTTCTTTTATAGAGAATCAAGCTCTAC
TCGATGAAGCCGCAATGTTAACCTGCATGGCCTACGTTGATTTGAATCCCATTAGAGCCCAACTGGCTGATACACCAGAA
CAATCCGACCATACCAGTATTCAACTGCGTATTCGGGCCGCATTGAAAGGTGAGCAGCCTAAAAATCTACTGCCTTTTAT
CGTTAATGAGCGCGACAACCAGCCCAATGGCATTGCGTTTTTATTATCGGACTACCTTGAATTGGTCGATGATACAGGCC
GAATTATTCGAAGCGACAAACGTGGGGCAATCAGTGAGAATAGTGCTAAGTTACTGGCAAGATTAAATATCTCACATGAC
AATTGGCTCAAGCTCACTACTGAGTTTGGCAAGCTATTTCGCGGTCCGGTGGGTACGCTGCAAGAACTCACTGATTACTG
CGAACATCTAGAAAAGCGACGACGGCACTTTGCCGCAAGCTGTCAGCACTTTCACAGCAACTAA

Upstream 100 bases:

>100_bases
AGTACTTGAGCAGTGGCATAAGCAGTTTAAAGGCGATGAATTAACGCAAAAATTCGCTAAAGGTGAGTTGGTTGAGGCCA
TGAGGTCAACAGGTTAAGGC

Downstream 100 bases:

>100_bases
CTGTAATCCTGCTTAACCAAACCCATCACTACCCATTTGTTTTATTGGGTGGATTAGCATGTCTTAAATACAACATTTTT
AATGAGTTAGCTCATTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MQLPFIAVDYVISVGLCAASTNPSQDKRIKKITVQVVSGKGDLPISFIENQALLDEAAMLTCMAYVDLNPIRAQLADTPE
QSDHTSIQLRIRAALKGEQPKNLLPFIVNERDNQPNGIAFLLSDYLELVDDTGRIIRSDKRGAISENSAKLLARLNISHD
NWLKLTTEFGKLFRGPVGTLQELTDYCEHLEKRRRHFAASCQHFHSN

Sequences:

>Translated_207_residues
MQLPFIAVDYVISVGLCAASTNPSQDKRIKKITVQVVSGKGDLPISFIENQALLDEAAMLTCMAYVDLNPIRAQLADTPE
QSDHTSIQLRIRAALKGEQPKNLLPFIVNERDNQPNGIAFLLSDYLELVDDTGRIIRSDKRGAISENSAKLLARLNISHD
NWLKLTTEFGKLFRGPVGTLQELTDYCEHLEKRRRHFAASCQHFHSN
>Mature_207_residues
MQLPFIAVDYVISVGLCAASTNPSQDKRIKKITVQVVSGKGDLPISFIENQALLDEAAMLTCMAYVDLNPIRAQLADTPE
QSDHTSIQLRIRAALKGEQPKNLLPFIVNERDNQPNGIAFLLSDYLELVDDTGRIIRSDKRGAISENSAKLLARLNISHD
NWLKLTTEFGKLFRGPVGTLQELTDYCEHLEKRRRHFAASCQHFHSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23201; Mature: 23201

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPFIAVDYVISVGLCAASTNPSQDKRIKKITVQVVSGKGDLPISFIENQALLDEAAML
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEECCCCCCCHHHHCCHHHHHHHHHH
TCMAYVDLNPIRAQLADTPEQSDHTSIQLRIRAALKGEQPKNLLPFIVNERDNQPNGIAF
HHHHHHCCCHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCCCCHHHH
LLSDYLELVDDTGRIIRSDKRGAISENSAKLLARLNISHDNWLKLTTEFGKLFRGPVGTL
HHHHHHHHHHCCCHHEECCCCCCCCCCHHEEEEEEECCCCCCEEEHHHHHHHHCCCCHHH
QELTDYCEHLEKRRRHFAASCQHFHSN
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLPFIAVDYVISVGLCAASTNPSQDKRIKKITVQVVSGKGDLPISFIENQALLDEAAML
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEECCCCCCCHHHHCCHHHHHHHHHH
TCMAYVDLNPIRAQLADTPEQSDHTSIQLRIRAALKGEQPKNLLPFIVNERDNQPNGIAF
HHHHHHCCCHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCCCCHHHH
LLSDYLELVDDTGRIIRSDKRGAISENSAKLLARLNISHDNWLKLTTEFGKLFRGPVGTL
HHHHHHHHHHCCCHHEECCCCCCCCCCHHEEEEEEECCCCCCEEEHHHHHHHHCCCCHHH
QELTDYCEHLEKRRRHFAASCQHFHSN
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA