| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is yheV [H]
Identifier: 120597658
GI number: 120597658
Start: 931640
End: 931843
Strand: Direct
Name: yheV [H]
Synonym: Sputw3181_0827
Alternate gene names: 120597658
Gene position: 931640-931843 (Clockwise)
Preceding gene: 120597655
Following gene: 120597659
Centisome position: 19.79
GC content: 45.1
Gene sequence:
>204_bases ATGACAAACACTAAAATCAAAAAGCGTTTTGTAGCCGGTGCTAAGTGCCCAAAATGCAGCGCCAAAGACAGCATTTTACT CTACAAAGAAAACGGCATCGAAACCGTTGAATGCACAGAGTGTGATTACCGTGAACAGCAAACCGATGAAAAGGTGGCAG AAAAAGCCACAGGTGCTGTGATAGGGGTGTTTAAGCCGGACTAG
Upstream 100 bases:
>100_bases ATACTTTCAGGTAACACTGGCATTCAATCATCAGTGTGGCAAAATAGCGCCAATTTCTTCGGCCGAGTCCCTTGGCCCTG CTATCTGGTCTTTATCTATT
Downstream 100 bases:
>100_bases GTTTCGCTAGGCAGTCCAGAAAATTAGATTCGTAAAAGATTCTCCGATGTGCAGTGTCGATTTGCAATATTACTCTGGTG GCACGCCGCCTATTGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MTNTKIKKRFVAGAKCPKCSAKDSILLYKENGIETVECTECDYREQQTDEKVAEKATGAVIGVFKPD
Sequences:
>Translated_67_residues MTNTKIKKRFVAGAKCPKCSAKDSILLYKENGIETVECTECDYREQQTDEKVAEKATGAVIGVFKPD >Mature_66_residues TNTKIKKRFVAGAKCPKCSAKDSILLYKENGIETVECTECDYREQQTDEKVAEKATGAVIGVFKPD
Specific function: Unknown
COG id: COG3529
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082247, Length=64, Percent_Identity=43.75, Blast_Score=68, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012658 [H]
Pfam domain/function: PF09526 DUF2387 [H]
EC number: NA
Molecular weight: Translated: 7430; Mature: 7298
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTKIKKRFVAGAKCPKCSAKDSILLYKENGIETVECTECDYREQQTDEKVAEKATGAV CCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHCCCEE IGVFKPD EEEECCC >Mature Secondary Structure TNTKIKKRFVAGAKCPKCSAKDSILLYKENGIETVECTECDYREQQTDEKVAEKATGAV CCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHCCCEE IGVFKPD EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]