Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597655

Identifier: 120597655

GI number: 120597655

Start: 928523

End: 928933

Strand: Direct

Name: 120597655

Synonym: Sputw3181_0824

Alternate gene names: NA

Gene position: 928523-928933 (Clockwise)

Preceding gene: 120597654

Following gene: 120597658

Centisome position: 19.72

GC content: 45.5

Gene sequence:

>411_bases
ATGACTGAAGAATTCCTTTTAGAAGGTGGTTGCCTGTGTGGGGCGATTCGTTATCGGCTCGATGGTGAACCCTTTGATGC
GGATTATTGCCACTGCCGTATGTGTCAAAAGAGTACGGGGTCAGTGTTTGGCGCTTGGATGGATTTTAAGTTTGCTCAAG
TCACTTGGCTTAATGGTGTGGTGACTGAATTTGCATCATCTGAGTTTGTTAGGCGCGGTTTTTGTAAGGAGTGTGGTTGC
TCGCTGACCTATCGGCATACCCAATACCCTGATTATGTCACCTTAACAATAGCGAGCTTAGATGATCCTAATCGCATCAG
GCCACATTACCATATTTATACTGAGAGTCAGGTCAGTTGGTTGACTATTGAGGATAACTGTAAAAGGTATCCCCAAGGTC
GAAGCGCCTAA

Upstream 100 bases:

>100_bases
GCTAATCCACAATTGTCGATTTATGGCATTACGGCACGTAATGCGAGCAAACTAGCAGAGAGACTCGCGGCAAAACTCAG
TGTAGGGGACAAGGTTTAGT

Downstream 100 bases:

>100_bases
GCTCTGTGAGGTAATGGCTTTATCTAGGCGTATAAATTTAAGGTGTGAGTAGCGCTAACTGTTTTACATCGGCTTCGCCT
AACCCGAATAAACTTAGGTA

Product: glutathione-dependent formaldehyde-activating, GFA

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating Protein GFA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MTEEFLLEGGCLCGAIRYRLDGEPFDADYCHCRMCQKSTGSVFGAWMDFKFAQVTWLNGVVTEFASSEFVRRGFCKECGC
SLTYRHTQYPDYVTLTIASLDDPNRIRPHYHIYTESQVSWLTIEDNCKRYPQGRSA

Sequences:

>Translated_136_residues
MTEEFLLEGGCLCGAIRYRLDGEPFDADYCHCRMCQKSTGSVFGAWMDFKFAQVTWLNGVVTEFASSEFVRRGFCKECGC
SLTYRHTQYPDYVTLTIASLDDPNRIRPHYHIYTESQVSWLTIEDNCKRYPQGRSA
>Mature_135_residues
TEEFLLEGGCLCGAIRYRLDGEPFDADYCHCRMCQKSTGSVFGAWMDFKFAQVTWLNGVVTEFASSEFVRRGFCKECGCS
LTYRHTQYPDYVTLTIASLDDPNRIRPHYHIYTESQVSWLTIEDNCKRYPQGRSA

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15697; Mature: 15566

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEEFLLEGGCLCGAIRYRLDGEPFDADYCHCRMCQKSTGSVFGAWMDFKFAQVTWLNGV
CCCHHEECCCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCCEEEEECCCEEEEEEHHHHH
VTEFASSEFVRRGFCKECGCSLTYRHTQYPDYVTLTIASLDDPNRIRPHYHIYTESQVSW
HHHHHHHHHHHHCCHHHHCCCEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCEEE
LTIEDNCKRYPQGRSA
EEECCCCCCCCCCCCC
>Mature Secondary Structure 
TEEFLLEGGCLCGAIRYRLDGEPFDADYCHCRMCQKSTGSVFGAWMDFKFAQVTWLNGV
CCHHEECCCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCCEEEEECCCEEEEEEHHHHH
VTEFASSEFVRRGFCKECGCSLTYRHTQYPDYVTLTIASLDDPNRIRPHYHIYTESQVSW
HHHHHHHHHHHHCCHHHHCCCEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCEEE
LTIEDNCKRYPQGRSA
EEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA