| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597649
Identifier: 120597649
GI number: 120597649
Start: 922922
End: 923464
Strand: Direct
Name: 120597649
Synonym: Sputw3181_0818
Alternate gene names: NA
Gene position: 922922-923464 (Clockwise)
Preceding gene: 120597648
Following gene: 120597653
Centisome position: 19.6
GC content: 46.78
Gene sequence:
>543_bases ATGTTATGGGGAGATATTTTATTGGAAAATCTGATGATTACGATTCGAAAAGCAACTAAAACCGATGCACAAGCATGCTG GGATATCCGCAATGCGGCCATCAATAAAGGCTGCACCGGATTTTATGATGCGGGCGATCTGTTGATTTGGACCGCAGGCG AACTGACCGAGCAATTTAGGCGTATCGTCGAGGCGCATTTTTATGTGGCAGAGATCTCTGATAATGCGTTGCAGGTAAAG ACTGTGGTCGGCACTGTTATGTTGGATGAACCCTATGCCCAGTTAGAAGCTCTGTTTGTTTCCCCTGATGCTATGGGGCT TGGGGTAGGTAAGGCACTGCTTAAGTTTATTGAGACAATGGCGTTTAATCAGGGGATTGCCCAGCTCAGGTTGGAATCGA CCTTGAATGCAGTGGATTTTTATCGCCACTGTGGTTTTGGTGGTGAAGGTTTAGAAGAGGAATCAATCTACTGCTCACCT AGGGGCATCGCCTTAGAGTGTATGGTGATGTATAAGAATCTAGAACGGCCTTCGGCCTGCTAG
Upstream 100 bases:
>100_bases TTGAGCTTCTGTCGCGTTATTTAAAACCGCCTTCGGGCGGTTTTTTGTTGAGTCACATTTGAGATCAAGAGTTTACTTGG TGATTGAGTCGCTTCATGGC
Downstream 100 bases:
>100_bases GCCGCTCGGATAACGGTACGCGGCCTTGCCGTTACAGAGCGTCACTTCGTGACTCACGGTTTACCGAACGGGCTTTGCCC TTACGGTGAGCGCAGCGTTC
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase; Acyltransferase; Tautomerase
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MLWGDILLENLMITIRKATKTDAQACWDIRNAAINKGCTGFYDAGDLLIWTAGELTEQFRRIVEAHFYVAEISDNALQVK TVVGTVMLDEPYAQLEALFVSPDAMGLGVGKALLKFIETMAFNQGIAQLRLESTLNAVDFYRHCGFGGEGLEEESIYCSP RGIALECMVMYKNLERPSAC
Sequences:
>Translated_180_residues MLWGDILLENLMITIRKATKTDAQACWDIRNAAINKGCTGFYDAGDLLIWTAGELTEQFRRIVEAHFYVAEISDNALQVK TVVGTVMLDEPYAQLEALFVSPDAMGLGVGKALLKFIETMAFNQGIAQLRLESTLNAVDFYRHCGFGGEGLEEESIYCSP RGIALECMVMYKNLERPSAC >Mature_180_residues MLWGDILLENLMITIRKATKTDAQACWDIRNAAINKGCTGFYDAGDLLIWTAGELTEQFRRIVEAHFYVAEISDNALQVK TVVGTVMLDEPYAQLEALFVSPDAMGLGVGKALLKFIETMAFNQGIAQLRLESTLNAVDFYRHCGFGGEGLEEESIYCSP RGIALECMVMYKNLERPSAC
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19972; Mature: 19972
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWGDILLENLMITIRKATKTDAQACWDIRNAAINKGCTGFYDAGDLLIWTAGELTEQFR CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHH RIVEAHFYVAEISDNALQVKTVVGTVMLDEPYAQLEALFVSPDAMGLGVGKALLKFIETM HHHHHHHHEEEECCCCEEEHHHHHHHEECCCHHHHEEEEECCCCCCCHHHHHHHHHHHHH AFNQGIAQLRLESTLNAVDFYRHCGFGGEGLEEESIYCSPRGIALECMVMYKNLERPSAC HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLWGDILLENLMITIRKATKTDAQACWDIRNAAINKGCTGFYDAGDLLIWTAGELTEQFR CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHH RIVEAHFYVAEISDNALQVKTVVGTVMLDEPYAQLEALFVSPDAMGLGVGKALLKFIETM HHHHHHHHEEEECCCCEEEHHHHHHHEECCCHHHHEEEEECCCCCCCHHHHHHHHHHHHH AFNQGIAQLRLESTLNAVDFYRHCGFGGEGLEEESIYCSPRGIALECMVMYKNLERPSAC HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA