Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597653

Identifier: 120597653

GI number: 120597653

Start: 926336

End: 926842

Strand: Direct

Name: 120597653

Synonym: Sputw3181_0822

Alternate gene names: NA

Gene position: 926336-926842 (Clockwise)

Preceding gene: 120597649

Following gene: 120597654

Centisome position: 19.67

GC content: 44.18

Gene sequence:

>507_bases
ATGAAACGAAGAACCTTTTTACTGGGCGCATTTGCAGGTACTGCAGTGCTAGCCTTAGGGGTTAATCTCTATTCCCCTGA
ACTCAGTTTACCCGATGATAGTGAAGGTAAGGATTATCGTTTGCTATTTAGTGTACTCTTACCTGTGATGCTCGACGGGG
CGCTCCCCGATGTGACGACTCACAAGTTAGTGGCTCAAAATAGAACCTTAGATGCCATAAAAGAGTCAATTAATGTGTTG
CCAGCCGAGCAGCAAATTGAGTTGTTTGAATTACTCGATATGCTCGAGAATCGGCTTGGGCTACTGCTATTAACCTCTAG
CATGACGCCACTATTAATGCGTTCTCCTGCTGAATTAACAGAAATGCTAGAAAGTTGGCGCCATAGCTATTTTTCCTTAC
TACAGACGGCTTATTTAGGACTACGGGAATTAGTGATGGCAAGTTACTACGCCTGCCCTGAGCATTGGAGTCGTCTGCAT
TATGCCAAGCCTGAGTTATTCAAATAA

Upstream 100 bases:

>100_bases
TCTAGGCACCGCTATTGCTGAAAATTAAAACGTATGTTTAATTTGAATTCGCGCTTAGTGTAACACAATTGTTTTTTATG
CTGATATTCAGGAGATAGCG

Downstream 100 bases:

>100_bases
CGATTCTGTTAATGTTGGCATTAAACGCAAATAATCAAAATGTTACCCGTAGCACTGGAGCGCTCAAGTTGGCAATCATC
GATCCCATAGTGAATGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKRRTFLLGAFAGTAVLALGVNLYSPELSLPDDSEGKDYRLLFSVLLPVMLDGALPDVTTHKLVAQNRTLDAIKESINVL
PAEQQIELFELLDMLENRLGLLLLTSSMTPLLMRSPAELTEMLESWRHSYFSLLQTAYLGLRELVMASYYACPEHWSRLH
YAKPELFK

Sequences:

>Translated_168_residues
MKRRTFLLGAFAGTAVLALGVNLYSPELSLPDDSEGKDYRLLFSVLLPVMLDGALPDVTTHKLVAQNRTLDAIKESINVL
PAEQQIELFELLDMLENRLGLLLLTSSMTPLLMRSPAELTEMLESWRHSYFSLLQTAYLGLRELVMASYYACPEHWSRLH
YAKPELFK
>Mature_168_residues
MKRRTFLLGAFAGTAVLALGVNLYSPELSLPDDSEGKDYRLLFSVLLPVMLDGALPDVTTHKLVAQNRTLDAIKESINVL
PAEQQIELFELLDMLENRLGLLLLTSSMTPLLMRSPAELTEMLESWRHSYFSLLQTAYLGLRELVMASYYACPEHWSRLH
YAKPELFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19060; Mature: 19060

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRTFLLGAFAGTAVLALGVNLYSPELSLPDDSEGKDYRLLFSVLLPVMLDGALPDVTT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
HKLVAQNRTLDAIKESINVLPAEQQIELFELLDMLENRLGLLLLTSSMTPLLMRSPAELT
HHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHH
EMLESWRHSYFSLLQTAYLGLRELVMASYYACPEHWSRLHYAKPELFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKRRTFLLGAFAGTAVLALGVNLYSPELSLPDDSEGKDYRLLFSVLLPVMLDGALPDVTT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
HKLVAQNRTLDAIKESINVLPAEQQIELFELLDMLENRLGLLLLTSSMTPLLMRSPAELT
HHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHH
EMLESWRHSYFSLLQTAYLGLRELVMASYYACPEHWSRLHYAKPELFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA