| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597436
Identifier: 120597436
GI number: 120597436
Start: 662242
End: 662499
Strand: Direct
Name: 120597436
Synonym: Sputw3181_0605
Alternate gene names: NA
Gene position: 662242-662499 (Clockwise)
Preceding gene: 120597435
Following gene: 120597437
Centisome position: 14.07
GC content: 40.7
Gene sequence:
>258_bases ATGCTGTATCTCCAAGGAAATAATATGAAACGGGTTAGCGTATTAGGTGATTGCGATAAGTGTAAAAAAACTGAGGAAAT GTTCAAAGATATATCAGAGGAAATGGCCGTCGATCTGATCGTTAAAAAAGATACTGATCCACAGAGTTTAGTGAAATTTA AAGTAACAAAAACTCCCGCAGTCGTTATCGATGGGGAGCTAGTGCATAGCGGTTCAGTGCCGAGTAGAGCCGATATCGAA GAATGGCTGCGAGACTAA
Upstream 100 bases:
>100_bases TTTAAGTAAGCAAATAATCACTTTATAGCGCATCATGTTGCTGTATCTACCTAAAGCTCGACTAGGGATTAGGTGGAACT CTCAAGGTGAAAATCCTGCA
Downstream 100 bases:
>100_bases CACAGCTAGAATGAATGCTGGGATCATATTCAATGCAAAAGCGTTGCAGAATTGTGCGGTACATAAGTCAGTGTATACAC TATGTTATGTTGAGTGCATG
Product: redox-active disulfide protein 2
Products: NA
Alternate protein names: Thiol-Disulfide Isomerase And Thioredoxins Family Protein; Thiol-Disulfide Isomerase/Thioredoxin
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MLYLQGNNMKRVSVLGDCDKCKKTEEMFKDISEEMAVDLIVKKDTDPQSLVKFKVTKTPAVVIDGELVHSGSVPSRADIE EWLRD
Sequences:
>Translated_85_residues MLYLQGNNMKRVSVLGDCDKCKKTEEMFKDISEEMAVDLIVKKDTDPQSLVKFKVTKTPAVVIDGELVHSGSVPSRADIE EWLRD >Mature_85_residues MLYLQGNNMKRVSVLGDCDKCKKTEEMFKDISEEMAVDLIVKKDTDPQSLVKFKVTKTPAVVIDGELVHSGSVPSRADIE EWLRD
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9600; Mature: 9600
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYLQGNNMKRVSVLGDCDKCKKTEEMFKDISEEMAVDLIVKKDTDPQSLVKFKVTKTPA CEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHEEEEEECCCCE VVIDGELVHSGSVPSRADIEEWLRD EEECCEEEECCCCCCCCCHHHHHCC >Mature Secondary Structure MLYLQGNNMKRVSVLGDCDKCKKTEEMFKDISEEMAVDLIVKKDTDPQSLVKFKVTKTPA CEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHEEEEEECCCCE VVIDGELVHSGSVPSRADIEEWLRD EEECCEEEECCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA