| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597437
Identifier: 120597437
GI number: 120597437
Start: 662532
End: 663377
Strand: Direct
Name: 120597437
Synonym: Sputw3181_0606
Alternate gene names: NA
Gene position: 662532-663377 (Clockwise)
Preceding gene: 120597436
Following gene: 120597438
Centisome position: 14.07
GC content: 42.79
Gene sequence:
>846_bases ATGCAAAAGCGTTGCAGAATTGTGCGGTACATAAGTCAGTGTATACACTATGTTATGTTGAGTGCATGGTTTGGAATCTT TCCCCTATCGGCGGCTGACCCAGCACAGTCCATCGGCAAAGTACTAGAACGAGAGACCCGTTGGCAAAATCCAGATTATA TCCGCCAAGCTTTCAGTCATATTGCGTTAAATAATGAATATGACACTTATAAACACAGAGTTCGTAAATGGCAGGTACCA ATACGGGTTTTTATTGAACATCAAGTTGCCGATGGTGCTCTGCACACTCAATTAGTGCAGATGCATTTAAGCCATTTAAC GGAGATTACGGGTCACGATATTCGCTTAGTCGATTCGCTTGAAAAGGCTAATTTGCACTTAGTATTTACCCGTCAATCCC TGTGGGCGAATGAGATAGTGCGCTTAATGGGGCAAAGTGCTGTGCAAAATATCCATGGTTCAGTTTGCATGGCAAAATTT GCCCTCAATTCTTTGCAGCAAATTGAACGTGCTTGGATCATCATTCCCGTCGATCAAGCAAAAATGCACGGTAAGTTAGT GGCTTGTATTGTGGAAGAAATGACCCAAGTACTTGGATTACCCAATGACTCAGAAAAAGTGTTTCCCTCCATTTTTAACG ATAAAACCCAGCAGGATTTGCTCACAGGGCTGGATTTTATTCTCCTAAAACTACTCTATAGTCCACTGATTCACGCTGGG ATGACAGCCGCTGAGGTTGAACAACCTTTGTTGAACTTGCTCATCCAATGGCAGCATGATGGCACAATTATGAATGCCGA TAAAATGGTGCGACAAGGTAAATTGTACCCCTTACTCGGCTATTAA
Upstream 100 bases:
>100_bases ATGGGGAGCTAGTGCATAGCGGTTCAGTGCCGAGTAGAGCCGATATCGAAGAATGGCTGCGAGACTAACACAGCTAGAAT GAATGCTGGGATCATATTCA
Downstream 100 bases:
>100_bases CTACTGTGTGTTACTCCTAAAGTTGACATTACTCGTATGTGATTAATTAATCCTTTTTGTTTTAGGAATAAGGGCATAGT CTATCTTTAATAAGAGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MQKRCRIVRYISQCIHYVMLSAWFGIFPLSAADPAQSIGKVLERETRWQNPDYIRQAFSHIALNNEYDTYKHRVRKWQVP IRVFIEHQVADGALHTQLVQMHLSHLTEITGHDIRLVDSLEKANLHLVFTRQSLWANEIVRLMGQSAVQNIHGSVCMAKF ALNSLQQIERAWIIIPVDQAKMHGKLVACIVEEMTQVLGLPNDSEKVFPSIFNDKTQQDLLTGLDFILLKLLYSPLIHAG MTAAEVEQPLLNLLIQWQHDGTIMNADKMVRQGKLYPLLGY
Sequences:
>Translated_281_residues MQKRCRIVRYISQCIHYVMLSAWFGIFPLSAADPAQSIGKVLERETRWQNPDYIRQAFSHIALNNEYDTYKHRVRKWQVP IRVFIEHQVADGALHTQLVQMHLSHLTEITGHDIRLVDSLEKANLHLVFTRQSLWANEIVRLMGQSAVQNIHGSVCMAKF ALNSLQQIERAWIIIPVDQAKMHGKLVACIVEEMTQVLGLPNDSEKVFPSIFNDKTQQDLLTGLDFILLKLLYSPLIHAG MTAAEVEQPLLNLLIQWQHDGTIMNADKMVRQGKLYPLLGY >Mature_281_residues MQKRCRIVRYISQCIHYVMLSAWFGIFPLSAADPAQSIGKVLERETRWQNPDYIRQAFSHIALNNEYDTYKHRVRKWQVP IRVFIEHQVADGALHTQLVQMHLSHLTEITGHDIRLVDSLEKANLHLVFTRQSLWANEIVRLMGQSAVQNIHGSVCMAKF ALNSLQQIERAWIIIPVDQAKMHGKLVACIVEEMTQVLGLPNDSEKVFPSIFNDKTQQDLLTGLDFILLKLLYSPLIHAG MTAAEVEQPLLNLLIQWQHDGTIMNADKMVRQGKLYPLLGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32273; Mature: 32273
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRCRIVRYISQCIHYVMLSAWFGIFPLSAADPAQSIGKVLERETRWQNPDYIRQAFSH CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH IALNNEYDTYKHRVRKWQVPIRVFIEHQVADGALHTQLVQMHLSHLTEITGHDIRLVDSL HHCCCCHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH EKANLHLVFTRQSLWANEIVRLMGQSAVQNIHGSVCMAKFALNSLQQIERAWIIIPVDQA HHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHH KMHGKLVACIVEEMTQVLGLPNDSEKVFPSIFNDKTQQDLLTGLDFILLKLLYSPLIHAG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC MTAAEVEQPLLNLLIQWQHDGTIMNADKMVRQGKLYPLLGY CCHHHHHHHHHHHHHHCCCCCCEECHHHHHHCCCCCCCCCC >Mature Secondary Structure MQKRCRIVRYISQCIHYVMLSAWFGIFPLSAADPAQSIGKVLERETRWQNPDYIRQAFSH CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH IALNNEYDTYKHRVRKWQVPIRVFIEHQVADGALHTQLVQMHLSHLTEITGHDIRLVDSL HHCCCCHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH EKANLHLVFTRQSLWANEIVRLMGQSAVQNIHGSVCMAKFALNSLQQIERAWIIIPVDQA HHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHH KMHGKLVACIVEEMTQVLGLPNDSEKVFPSIFNDKTQQDLLTGLDFILLKLLYSPLIHAG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC MTAAEVEQPLLNLLIQWQHDGTIMNADKMVRQGKLYPLLGY CCHHHHHHHHHHHHHHCCCCCCEECHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA