| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is yciR [C]
Identifier: 120597360
GI number: 120597360
Start: 571217
End: 575680
Strand: Direct
Name: yciR [C]
Synonym: Sputw3181_0529
Alternate gene names: 120597360
Gene position: 571217-575680 (Clockwise)
Preceding gene: 120597359
Following gene: 120597361
Centisome position: 12.13
GC content: 42.47
Gene sequence:
>4464_bases ATGCAGATAAAAATAATTAAAACATTTCTGGCATGTTTCATTCTTGTGCTCACTAGCTTCCACTCGGTTTGGGCGGGCGG CTTTGTGCAGCGAGTCTTTACCGATAGGGACGGTTTGGCTGCCACAAGTATTCGCGGCTTAGCCTTAGACTATTATGGTT TTGTTTGGGCGGCGACTGAGCAAGGACTCTATAGGGTCAGTAACGCTAAAGTGAGGCGTATTGATAAAATTGGTTTTGAG TCTCGCCTAGCGGATGATTTTTTAACCTCAGTGGTGAATGTTGATCGTAACCATTTACTCGTCAGTACGCATTCCACTAT TTATCTTTACAATATTCTGAATAATCAATTTACTGCCTTTGGCTCAGTCAAACTTTTTCCACAGTACGTAGGAGGAGCAC TTCTTTCCGCTATTCGTAAAGATGACCAAACGTGGTTGTTGTTGACCGATGCTGGATATATTTACGATTTTTCCCCCGCA AAAACTGAATTGTCAGTGATTACTCAGCTACCAGTTAATCGCGATCTTCCTTGGCGTAAGTTACTTCCACTACCAAATGG TGAAATGTTAGTGGCAGGTCAACAGCAGTTAGTCCTGCTAGACAAAAATGGTGAGTCGGTATTCCATTATCATTGGACCG AAACCATGGGGAGTATTCTCGATATGCTTGAGGATACAAAACAGCGAATTTGGATTGCGACGGGGCGAGGGGTCTATCAG TTTGAGTTGGCGAGCCGTCAAATTGTGCCAGTGCCAGAATTACCCGAATGGAGCACTTCAATTGTTGAAGATCCTAAAGG ATTTTTGTGGTTTACCAGTCGTGTGGGTCTGCTGAAGTGGTCACCCGAAACTCGTCAAGTTGAAAACTATCAGAAAGAAC TCAAGGCTCAGGCTAACATGGAAATACTGAAGGCCATGTTGTTTGATAGTTCAGGGCTTATGTGGGTTGGCGGTTCTGGG GATGGTTTAGCTTTGTTGGCCTCGTCGCCGGATTTTATCCTCGAGACTTATACCGCAGATCAACCTTATCAGTTGAGCGA TGCAATGACTTGGTCCATATATGCAAATAATGATGGCGTATGGCTAGGCTCCTCAAATTTGGCTTTTATTGGCAAGCATA GCCAAAAAGCAGTGGATATTCCGATTAATGGATTAGAACCACATCAAAGCATTTATGATATTAATGATTTTGGTGAACAT AACTTATTGATATCGACCACGGGAGGGCTTTTTGTTGTCGATAAGCAAACCTTACAAGGCAACAGTTTTTCCCAATGGGC CAGTGGCCAAGACGGATTTAAAAATAAGCTGATTTATAAAACCTATAAAGATCCACAGATAAAAGGGCGTATTTGGATCG CCACATCCACAGGATTGTATTATTGGGAGTCTGGTTTATCTGAACCTCGCCCCTTTGATATAGATAGACCCTCTAATAAT ACCAACGAACCTACACGCCCAACTATTCGCACTATGTATCGTGCTTCGGACGGAAAGCTCTGGTTAGGCGGAAAAAAAAT CTTTGGTTATATCGATGCTCAAGACGAGTTTCATGATCAGCGACTTTTGTTTAATGCCTTAGCTACACCGCCAACAGTGA GCCATATTGAGGAAATGTCATCTGGTGTGATGTGGTTTGGTTCCTACGAGAAAGGGTTATTTGAATATCATCAACATACA GAAGAACTTAAATCGCTGACCACTGAGTGGCAATTAAACTGCAGTTCGGTGTTTTTTATTCAAAAAACGCCAAAGTCAAA TCTTGTTGGCTGTGCTAACTCATTGATCCGTCAAGATGTTGAGACCGGAAATATTGCCATCTTTAATCATAGGGATGGGT TTATATCCGATGAGATGAATGAAGGAGCCTATTTTTATTCCCCACAGGCCGGTTTCTATCTAGGCACGCCAGAAGGTGTT ATGCGACTGGATGTTGATAGGCTGATAAACCGAATTAATGATGACCATGTCATGCTTGAGTCGGTTTCGGTGTATTACGA TGACCTCACTGAGGTGTCACTACTCCCTCAGCCCATGATGGTGATAAAGCCCGATGCCAATATTGTGAGCTTACAGATCA CTAATCTTGATTATCTTGATGATTCACCCATGCAGTTTAAATACCGATTGCGTTATCAGGGAGAGGACGATAATTACGTT TTACTGCAGGGAGAATCTCAAATCAATCTTGCGGGCTTGGCGGCCGGTGAGTATGTGTTGGATATTTTAAGCCAAGTTAA TGGGATATGGTCTAACAAGCCGTTTTCATACTCATTTTATGTTGAGCAGCACTGGTGGCTATCCCAAGGCTTTAAAGGTC TTTTAATGTTACTGCTTTTGGCCATCGCCCTTAGCTTCGCTTGGTATCGGCAGCGGCAGGTGAACAGTTTTATGCTGATG AATCAGGCGTTAACTGAAAGTGACGATAGATTAAGGCAATCATTGCGCGGGAGTGACTCCGATCTTTGGGAGTGGCATAA AGACACTCAAAAATTTCATCTTGATAATCGTGGATCTGTACTTGGAAAACATACAAATGAAATTATCGTTTCATTAGAGG ATTTACCGATACACCAGCTGGATAGAGACAAAGTCCTTGCTCAGTGGAACAGTATGCTGGTGGGTGAGGTCGATCGATTT GAGGCGGAATACCGTTATCAGCACCGAGAGGGTCATTGGGGGTGGTTAAGGGTTAGGGGTCGTCCCATTAGTCGCAATAA GCATACCCAAGAGATTGAACGTGCAGCAGGAATTTACAGTGATATTACGGTGCAGAGGCTGCTTGAGGATGAAGTGAAAT TACTTGCCCAAGCTTTTGAAAACACCTCAGAAGGCGTGTTGATTTTAGAGAGCAATGAAAATATACGGGTTGCTAACCAT GCCGCACAGCAGATTATTGGTTCAGGCGACACTGATTTAGTTGGCTTATCCTTTTCGCAATTTTTGCGGATGAATGATGG TTTATCCTACGAGATTAAACAGTTGCTAGACACCGAAACCTCTTGGACGGGAGAGCGAGAGTTAGTTAACCAAAGGGGGC ATTTGTGTCCTGTATGGCTCAATGTTTCGATGATGCAAACGGCTAATATTAAAGAACATTATTATGTTGTGGTGTTTTCA GATATTACTGAACGTAAAAGAACAGAAGCCGATTTAAGGCGCCTCGCTAATTATGATGTGTTAACAGGCTTGCCCAATCG TTCATTGTTTTCGAATCGATTATTGCAGTCGATACAAGTCGCGCAGCAGACGGGAGAAAAACTGGCGCTACTCTTTCTCG ACCTTGATAGATTTAAGCATGTTAATGACTCCTACGGTCACAGTATGGGAGATGCGCTTTTAGTTGAAGCATCAAACCGA CTTCAATCCTGTATCTCCAGTGAACATTTACTCTGCCGTTTTGGTGGTGATGAGTTCGTTATTTTGCTTAGGAATGCAAG TAATATCGATGAGATTAATCATATTGCTGAGCGTTTATTGGCACAGATAGTGGCACCTTTTAAGCTGTTCGGTCGGGAGT TTTATATTTCCACCAGTATTGGTATTAGTATTTGGCCTGATGATGCCATTCAACCTGAGGCCTTTATTAAAAATGCCGAT CTTGCTATGTATCATGCTAAGGAAGAAGGGCGGGGTAATTTCAAATATTATTCATCAGAACGTAATGCGCAGGCTTTATA CCATTTACGTTTAGAAGCCGATTTACGAAAAGCGATTGAGCGCGAAGAGTTTGAGCTTTATTACCAGCCGCAGATTGATA TTGTGCAGGGGGATAAATTTATTGGCATGGAGGCCTTGATCCGCTGGCGCCATCCACAGGAAGGATTTATTCGTCCTGAT ATCTTTATTAAGGTAGCGGAATCCTGTGGTCTTATTGTTGATATTGATCGCTGGGTATTACGACAAGCCTGTTTGCATGG GGCTAAGTGGATTAAAGCGTATTCTGAGCCATTTAAGTTGTCGGTCAATATTTCAGCGGTGCACTTTCGGCAAGCTGATT TTATCGAGGGTATTCAACAAATTTTGTTAGAAACTCAGATGCCGCCTTCATCCCTTGGGTTAGAAATTACCGAAGGTGTA TTAATGAAGGAACTGCAAGTCGCAAAAAGTCATTTAAATCAACTAAAGTCCTTAGGTATTGAAGTCGCAATTGATGACTT TGGAACAGGGTATTCATCACTGGCATATTTGCGGCATTTTGATGTTAACACGCTAAAAATTGATCGATCATTCCTTATTG ATATTGCGACGAATACTGCAGACCAAGCGATAGTCAGCAGTATTATTGAACTGGCACGCAATCTTAAATTAAATGTCGTT GCCGAGGGGATTGAAACGGTAGAACAGTTAGAGCAGGTTTTCAGCCGAGGCTGTTATGTTATCCAAGGTTACTATTTTGC AAAACCTATGTCGGTGAGAGATTTTGAGTTATATATCGCTGCAGCTAATAGAGTTCACGATTAA
Upstream 100 bases:
>100_bases AAGGCGCTTTTTTATTGCGTCGCGTAAAATGTAACTTTAATGTAAACGAGCGGGTGAATTGATAGAGTTGAACTGCTAGA GTACTAATACGAGTCGTCAA
Downstream 100 bases:
>100_bases TGAACTCATCGGTTCAGATAAAATATGACTGACGGTTAAATGCATAAGTTTGTTAATATAACGCGAATTTTATCCTATAA AAAGTGATCCTTAATGATGC
Product: diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1487; Mature: 1487
Protein sequence:
>1487_residues MQIKIIKTFLACFILVLTSFHSVWAGGFVQRVFTDRDGLAATSIRGLALDYYGFVWAATEQGLYRVSNAKVRRIDKIGFE SRLADDFLTSVVNVDRNHLLVSTHSTIYLYNILNNQFTAFGSVKLFPQYVGGALLSAIRKDDQTWLLLTDAGYIYDFSPA KTELSVITQLPVNRDLPWRKLLPLPNGEMLVAGQQQLVLLDKNGESVFHYHWTETMGSILDMLEDTKQRIWIATGRGVYQ FELASRQIVPVPELPEWSTSIVEDPKGFLWFTSRVGLLKWSPETRQVENYQKELKAQANMEILKAMLFDSSGLMWVGGSG DGLALLASSPDFILETYTADQPYQLSDAMTWSIYANNDGVWLGSSNLAFIGKHSQKAVDIPINGLEPHQSIYDINDFGEH NLLISTTGGLFVVDKQTLQGNSFSQWASGQDGFKNKLIYKTYKDPQIKGRIWIATSTGLYYWESGLSEPRPFDIDRPSNN TNEPTRPTIRTMYRASDGKLWLGGKKIFGYIDAQDEFHDQRLLFNALATPPTVSHIEEMSSGVMWFGSYEKGLFEYHQHT EELKSLTTEWQLNCSSVFFIQKTPKSNLVGCANSLIRQDVETGNIAIFNHRDGFISDEMNEGAYFYSPQAGFYLGTPEGV MRLDVDRLINRINDDHVMLESVSVYYDDLTEVSLLPQPMMVIKPDANIVSLQITNLDYLDDSPMQFKYRLRYQGEDDNYV LLQGESQINLAGLAAGEYVLDILSQVNGIWSNKPFSYSFYVEQHWWLSQGFKGLLMLLLLAIALSFAWYRQRQVNSFMLM NQALTESDDRLRQSLRGSDSDLWEWHKDTQKFHLDNRGSVLGKHTNEIIVSLEDLPIHQLDRDKVLAQWNSMLVGEVDRF EAEYRYQHREGHWGWLRVRGRPISRNKHTQEIERAAGIYSDITVQRLLEDEVKLLAQAFENTSEGVLILESNENIRVANH AAQQIIGSGDTDLVGLSFSQFLRMNDGLSYEIKQLLDTETSWTGERELVNQRGHLCPVWLNVSMMQTANIKEHYYVVVFS DITERKRTEADLRRLANYDVLTGLPNRSLFSNRLLQSIQVAQQTGEKLALLFLDLDRFKHVNDSYGHSMGDALLVEASNR LQSCISSEHLLCRFGGDEFVILLRNASNIDEINHIAERLLAQIVAPFKLFGREFYISTSIGISIWPDDAIQPEAFIKNAD LAMYHAKEEGRGNFKYYSSERNAQALYHLRLEADLRKAIEREEFELYYQPQIDIVQGDKFIGMEALIRWRHPQEGFIRPD IFIKVAESCGLIVDIDRWVLRQACLHGAKWIKAYSEPFKLSVNISAVHFRQADFIEGIQQILLETQMPPSSLGLEITEGV LMKELQVAKSHLNQLKSLGIEVAIDDFGTGYSSLAYLRHFDVNTLKIDRSFLIDIATNTADQAIVSSIIELARNLKLNVV AEGIETVEQLEQVFSRGCYVIQGYYFAKPMSVRDFELYIAAANRVHD
Sequences:
>Translated_1487_residues MQIKIIKTFLACFILVLTSFHSVWAGGFVQRVFTDRDGLAATSIRGLALDYYGFVWAATEQGLYRVSNAKVRRIDKIGFE SRLADDFLTSVVNVDRNHLLVSTHSTIYLYNILNNQFTAFGSVKLFPQYVGGALLSAIRKDDQTWLLLTDAGYIYDFSPA KTELSVITQLPVNRDLPWRKLLPLPNGEMLVAGQQQLVLLDKNGESVFHYHWTETMGSILDMLEDTKQRIWIATGRGVYQ FELASRQIVPVPELPEWSTSIVEDPKGFLWFTSRVGLLKWSPETRQVENYQKELKAQANMEILKAMLFDSSGLMWVGGSG DGLALLASSPDFILETYTADQPYQLSDAMTWSIYANNDGVWLGSSNLAFIGKHSQKAVDIPINGLEPHQSIYDINDFGEH NLLISTTGGLFVVDKQTLQGNSFSQWASGQDGFKNKLIYKTYKDPQIKGRIWIATSTGLYYWESGLSEPRPFDIDRPSNN TNEPTRPTIRTMYRASDGKLWLGGKKIFGYIDAQDEFHDQRLLFNALATPPTVSHIEEMSSGVMWFGSYEKGLFEYHQHT EELKSLTTEWQLNCSSVFFIQKTPKSNLVGCANSLIRQDVETGNIAIFNHRDGFISDEMNEGAYFYSPQAGFYLGTPEGV MRLDVDRLINRINDDHVMLESVSVYYDDLTEVSLLPQPMMVIKPDANIVSLQITNLDYLDDSPMQFKYRLRYQGEDDNYV LLQGESQINLAGLAAGEYVLDILSQVNGIWSNKPFSYSFYVEQHWWLSQGFKGLLMLLLLAIALSFAWYRQRQVNSFMLM NQALTESDDRLRQSLRGSDSDLWEWHKDTQKFHLDNRGSVLGKHTNEIIVSLEDLPIHQLDRDKVLAQWNSMLVGEVDRF EAEYRYQHREGHWGWLRVRGRPISRNKHTQEIERAAGIYSDITVQRLLEDEVKLLAQAFENTSEGVLILESNENIRVANH AAQQIIGSGDTDLVGLSFSQFLRMNDGLSYEIKQLLDTETSWTGERELVNQRGHLCPVWLNVSMMQTANIKEHYYVVVFS DITERKRTEADLRRLANYDVLTGLPNRSLFSNRLLQSIQVAQQTGEKLALLFLDLDRFKHVNDSYGHSMGDALLVEASNR LQSCISSEHLLCRFGGDEFVILLRNASNIDEINHIAERLLAQIVAPFKLFGREFYISTSIGISIWPDDAIQPEAFIKNAD LAMYHAKEEGRGNFKYYSSERNAQALYHLRLEADLRKAIEREEFELYYQPQIDIVQGDKFIGMEALIRWRHPQEGFIRPD IFIKVAESCGLIVDIDRWVLRQACLHGAKWIKAYSEPFKLSVNISAVHFRQADFIEGIQQILLETQMPPSSLGLEITEGV LMKELQVAKSHLNQLKSLGIEVAIDDFGTGYSSLAYLRHFDVNTLKIDRSFLIDIATNTADQAIVSSIIELARNLKLNVV AEGIETVEQLEQVFSRGCYVIQGYYFAKPMSVRDFELYIAAANRVHD >Mature_1487_residues MQIKIIKTFLACFILVLTSFHSVWAGGFVQRVFTDRDGLAATSIRGLALDYYGFVWAATEQGLYRVSNAKVRRIDKIGFE SRLADDFLTSVVNVDRNHLLVSTHSTIYLYNILNNQFTAFGSVKLFPQYVGGALLSAIRKDDQTWLLLTDAGYIYDFSPA KTELSVITQLPVNRDLPWRKLLPLPNGEMLVAGQQQLVLLDKNGESVFHYHWTETMGSILDMLEDTKQRIWIATGRGVYQ FELASRQIVPVPELPEWSTSIVEDPKGFLWFTSRVGLLKWSPETRQVENYQKELKAQANMEILKAMLFDSSGLMWVGGSG DGLALLASSPDFILETYTADQPYQLSDAMTWSIYANNDGVWLGSSNLAFIGKHSQKAVDIPINGLEPHQSIYDINDFGEH NLLISTTGGLFVVDKQTLQGNSFSQWASGQDGFKNKLIYKTYKDPQIKGRIWIATSTGLYYWESGLSEPRPFDIDRPSNN TNEPTRPTIRTMYRASDGKLWLGGKKIFGYIDAQDEFHDQRLLFNALATPPTVSHIEEMSSGVMWFGSYEKGLFEYHQHT EELKSLTTEWQLNCSSVFFIQKTPKSNLVGCANSLIRQDVETGNIAIFNHRDGFISDEMNEGAYFYSPQAGFYLGTPEGV MRLDVDRLINRINDDHVMLESVSVYYDDLTEVSLLPQPMMVIKPDANIVSLQITNLDYLDDSPMQFKYRLRYQGEDDNYV LLQGESQINLAGLAAGEYVLDILSQVNGIWSNKPFSYSFYVEQHWWLSQGFKGLLMLLLLAIALSFAWYRQRQVNSFMLM NQALTESDDRLRQSLRGSDSDLWEWHKDTQKFHLDNRGSVLGKHTNEIIVSLEDLPIHQLDRDKVLAQWNSMLVGEVDRF EAEYRYQHREGHWGWLRVRGRPISRNKHTQEIERAAGIYSDITVQRLLEDEVKLLAQAFENTSEGVLILESNENIRVANH AAQQIIGSGDTDLVGLSFSQFLRMNDGLSYEIKQLLDTETSWTGERELVNQRGHLCPVWLNVSMMQTANIKEHYYVVVFS DITERKRTEADLRRLANYDVLTGLPNRSLFSNRLLQSIQVAQQTGEKLALLFLDLDRFKHVNDSYGHSMGDALLVEASNR LQSCISSEHLLCRFGGDEFVILLRNASNIDEINHIAERLLAQIVAPFKLFGREFYISTSIGISIWPDDAIQPEAFIKNAD LAMYHAKEEGRGNFKYYSSERNAQALYHLRLEADLRKAIEREEFELYYQPQIDIVQGDKFIGMEALIRWRHPQEGFIRPD IFIKVAESCGLIVDIDRWVLRQACLHGAKWIKAYSEPFKLSVNISAVHFRQADFIEGIQQILLETQMPPSSLGLEITEGV LMKELQVAKSHLNQLKSLGIEVAIDDFGTGYSSLAYLRHFDVNTLKIDRSFLIDIATNTADQAIVSSIIELARNLKLNVV AEGIETVEQLEQVFSRGCYVIQGYYFAKPMSVRDFELYIAAANRVHD
Specific function: Unknown
COG id: COG5001
COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MHYT domain [H]
Homologues:
Organism=Escherichia coli, GI1787541, Length=565, Percent_Identity=33.6283185840708, Blast_Score=313, Evalue=8e-86, Organism=Escherichia coli, GI87081921, Length=456, Percent_Identity=30.9210526315789, Blast_Score=228, Evalue=2e-60, Organism=Escherichia coli, GI226510982, Length=422, Percent_Identity=27.2511848341232, Blast_Score=179, Evalue=1e-45, Organism=Escherichia coli, GI1788502, Length=248, Percent_Identity=37.9032258064516, Blast_Score=168, Evalue=3e-42, Organism=Escherichia coli, GI87081980, Length=258, Percent_Identity=33.3333333333333, Blast_Score=157, Evalue=5e-39, Organism=Escherichia coli, GI1790496, Length=248, Percent_Identity=35.8870967741936, Blast_Score=146, Evalue=1e-35, Organism=Escherichia coli, GI1786507, Length=254, Percent_Identity=33.8582677165354, Blast_Score=144, Evalue=4e-35, Organism=Escherichia coli, GI1788381, Length=602, Percent_Identity=24.5847176079734, Blast_Score=140, Evalue=7e-34, Organism=Escherichia coli, GI87081845, Length=254, Percent_Identity=33.4645669291339, Blast_Score=139, Evalue=2e-33, Organism=Escherichia coli, GI1788849, Length=240, Percent_Identity=37.0833333333333, Blast_Score=136, Evalue=8e-33, Organism=Escherichia coli, GI87081743, Length=255, Percent_Identity=30.9803921568627, Blast_Score=129, Evalue=2e-30, Organism=Escherichia coli, GI1787055, Length=239, Percent_Identity=32.6359832635983, Blast_Score=122, Evalue=2e-28, Organism=Escherichia coli, GI87082096, Length=256, Percent_Identity=30.078125, Blast_Score=103, Evalue=6e-23, Organism=Escherichia coli, GI87081881, Length=180, Percent_Identity=37.2222222222222, Blast_Score=99, Evalue=3e-21, Organism=Escherichia coli, GI145693134, Length=173, Percent_Identity=35.2601156069364, Blast_Score=91, Evalue=6e-19, Organism=Escherichia coli, GI87081977, Length=151, Percent_Identity=33.7748344370861, Blast_Score=90, Evalue=9e-19, Organism=Escherichia coli, GI1788956, Length=163, Percent_Identity=36.8098159509202, Blast_Score=87, Evalue=8e-18, Organism=Escherichia coli, GI1787816, Length=170, Percent_Identity=34.1176470588235, Blast_Score=83, Evalue=1e-16, Organism=Escherichia coli, GI1787262, Length=163, Percent_Identity=30.6748466257669, Blast_Score=82, Evalue=3e-16, Organism=Escherichia coli, GI1786584, Length=177, Percent_Identity=28.2485875706215, Blast_Score=75, Evalue=3e-14, Organism=Escherichia coli, GI1787802, Length=200, Percent_Identity=26, Blast_Score=71, Evalue=4e-13, Organism=Escherichia coli, GI87082007, Length=157, Percent_Identity=29.9363057324841, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1787410, Length=120, Percent_Identity=31.6666666666667, Blast_Score=68, Evalue=4e-12, Organism=Escherichia coli, GI87081974, Length=150, Percent_Identity=28.6666666666667, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR001633 - InterPro: IPR005330 [H]
Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]
EC number: NA
Molecular weight: Translated: 169589; Mature: 169589
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS50113 PAC ; PS50883 EAL ; PS50887 GGDEF ; PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKIIKTFLACFILVLTSFHSVWAGGFVQRVFTDRDGLAATSIRGLALDYYGFVWAATE CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEECCEEEEEECC QGLYRVSNAKVRRIDKIGFESRLADDFLTSVVNVDRNHLLVSTHSTIYLYNILNNQFTAF CCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCEEEE GSVKLFPQYVGGALLSAIRKDDQTWLLLTDAGYIYDFSPAKTELSVITQLPVNRDLPWRK CCEEECHHHHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCEEEEEEECCCCCCCCHHH LLPLPNGEMLVAGQQQLVLLDKNGESVFHYHWTETMGSILDMLEDTKQRIWIATGRGVYQ CCCCCCCCEEEECCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCEEEEEECCCEEE FELASRQIVPVPELPEWSTSIVEDPKGFLWFTSRVGLLKWSPETRQVENYQKELKAQANM EEECCCEECCCCCCCCCCHHHHCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHH EILKAMLFDSSGLMWVGGSGDGLALLASSPDFILETYTADQPYQLSDAMTWSIYANNDGV HHHHHHHHCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCEEECCCEEEEEEECCCEE WLGSSNLAFIGKHSQKAVDIPINGLEPHQSIYDINDFGEHNLLISTTGGLFVVDKQTLQG EECCCCEEEEECCCCCEEECCCCCCCCCHHEECCCCCCCCCEEEEECCCEEEEECHHCCC NSFSQWASGQDGFKNKLIYKTYKDPQIKGRIWIATSTGLYYWESGLSEPRPFDIDRPSNN CCCHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCC TNEPTRPTIRTMYRASDGKLWLGGKKIFGYIDAQDEFHDQRLLFNALATPPTVSHIEEMS CCCCCCCHHHHHEECCCCEEEECCEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHH SGVMWFGSYEKGLFEYHQHTEELKSLTTEWQLNCSSVFFIQKTPKSNLVGCANSLIRQDV CCEEEEECHHHHHHHHHHHHHHHHHCCHHEEECCCEEEEEEECCCCCHHHHHHHHHHHCC ETGNIAIFNHRDGFISDEMNEGAYFYSPQAGFYLGTPEGVMRLDVDRLINRINDDHVMLE CCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEECCCCCCEEEEHHHHHHHCCCCEEEEE SVSVYYDDLTEVSLLPQPMMVIKPDANIVSLQITNLDYLDDSPMQFKYRLRYQGEDDNYV HHHHHHCCCHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCEE LLQGESQINLAGLAAGEYVLDILSQVNGIWSNKPFSYSFYVEQHWWLSQGFKGLLMLLLL EEECCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHCHHHHHHHHHH AIALSFAWYRQRQVNSFMLMNQALTESDDRLRQSLRGSDSDLWEWHKDTQKFHLDNRGSV HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCCC LGKHTNEIIVSLEDLPIHQLDRDKVLAQWNSMLVGEVDRFEAEYRYQHREGHWGWLRVRG CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEEC RPISRNKHTQEIERAAGIYSDITVQRLLEDEVKLLAQAFENTSEGVLILESNENIRVANH CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHH AAQQIIGSGDTDLVGLSFSQFLRMNDGLSYEIKQLLDTETSWTGERELVNQRGHLCPVWL HHHHHHCCCCCCEEECCHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEE NVSMMQTANIKEHYYVVVFSDITERKRTEADLRRLANYDVLTGLPNRSLFSNRLLQSIQV EEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHH AQQTGEKLALLFLDLDRFKHVNDSYGHSMGDALLVEASNRLQSCISSEHLLCRFGGDEFV HHHCCCEEEEEEEEHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCEEE ILLRNASNIDEINHIAERLLAQIVAPFKLFGREFYISTSIGISIWPDDAIQPEAFIKNAD EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCHHHHCCCC LAMYHAKEEGRGNFKYYSSERNAQALYHLRLEADLRKAIEREEFELYYQPQIDIVQGDKF EEEEEECCCCCCCCEEECCCCCCEEEEEEEEHHHHHHHHCCCCEEEEECCEEEEEECCCE IGMEALIRWRHPQEGFIRPDIFIKVAESCGLIVDIDRWVLRQACLHGAKWIKAYSEPFKL ECHHHHHCCCCCCCCCCCCHHEEEEHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEE SVNISAVHFRQADFIEGIQQILLETQMPPSSLGLEITEGVLMKELQVAKSHLNQLKSLGI EEEEEEEEECHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCE EVAIDDFGTGYSSLAYLRHFDVNTLKIDRSFLIDIATNTADQAIVSSIIELARNLKLNVV EEEEECCCCCHHHHHHHHCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCEEEEE AEGIETVEQLEQVFSRGCYVIQGYYFAKPMSVRDFELYIAAANRVHD HHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MQIKIIKTFLACFILVLTSFHSVWAGGFVQRVFTDRDGLAATSIRGLALDYYGFVWAATE CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEECCEEEEEECC QGLYRVSNAKVRRIDKIGFESRLADDFLTSVVNVDRNHLLVSTHSTIYLYNILNNQFTAF CCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCEEEE GSVKLFPQYVGGALLSAIRKDDQTWLLLTDAGYIYDFSPAKTELSVITQLPVNRDLPWRK CCEEECHHHHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCEEEEEEECCCCCCCCHHH LLPLPNGEMLVAGQQQLVLLDKNGESVFHYHWTETMGSILDMLEDTKQRIWIATGRGVYQ CCCCCCCCEEEECCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCEEEEEECCCEEE FELASRQIVPVPELPEWSTSIVEDPKGFLWFTSRVGLLKWSPETRQVENYQKELKAQANM EEECCCEECCCCCCCCCCHHHHCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHH EILKAMLFDSSGLMWVGGSGDGLALLASSPDFILETYTADQPYQLSDAMTWSIYANNDGV HHHHHHHHCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCEEECCCEEEEEEECCCEE WLGSSNLAFIGKHSQKAVDIPINGLEPHQSIYDINDFGEHNLLISTTGGLFVVDKQTLQG EECCCCEEEEECCCCCEEECCCCCCCCCHHEECCCCCCCCCEEEEECCCEEEEECHHCCC NSFSQWASGQDGFKNKLIYKTYKDPQIKGRIWIATSTGLYYWESGLSEPRPFDIDRPSNN CCCHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCC TNEPTRPTIRTMYRASDGKLWLGGKKIFGYIDAQDEFHDQRLLFNALATPPTVSHIEEMS CCCCCCCHHHHHEECCCCEEEECCEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHH SGVMWFGSYEKGLFEYHQHTEELKSLTTEWQLNCSSVFFIQKTPKSNLVGCANSLIRQDV CCEEEEECHHHHHHHHHHHHHHHHHCCHHEEECCCEEEEEEECCCCCHHHHHHHHHHHCC ETGNIAIFNHRDGFISDEMNEGAYFYSPQAGFYLGTPEGVMRLDVDRLINRINDDHVMLE CCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEECCCCCCEEEEHHHHHHHCCCCEEEEE SVSVYYDDLTEVSLLPQPMMVIKPDANIVSLQITNLDYLDDSPMQFKYRLRYQGEDDNYV HHHHHHCCCHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCEE LLQGESQINLAGLAAGEYVLDILSQVNGIWSNKPFSYSFYVEQHWWLSQGFKGLLMLLLL EEECCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHCHHHHHHHHHH AIALSFAWYRQRQVNSFMLMNQALTESDDRLRQSLRGSDSDLWEWHKDTQKFHLDNRGSV HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCCC LGKHTNEIIVSLEDLPIHQLDRDKVLAQWNSMLVGEVDRFEAEYRYQHREGHWGWLRVRG CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEEC RPISRNKHTQEIERAAGIYSDITVQRLLEDEVKLLAQAFENTSEGVLILESNENIRVANH CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHH AAQQIIGSGDTDLVGLSFSQFLRMNDGLSYEIKQLLDTETSWTGERELVNQRGHLCPVWL HHHHHHCCCCCCEEECCHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEE NVSMMQTANIKEHYYVVVFSDITERKRTEADLRRLANYDVLTGLPNRSLFSNRLLQSIQV EEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHH AQQTGEKLALLFLDLDRFKHVNDSYGHSMGDALLVEASNRLQSCISSEHLLCRFGGDEFV HHHCCCEEEEEEEEHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCEEE ILLRNASNIDEINHIAERLLAQIVAPFKLFGREFYISTSIGISIWPDDAIQPEAFIKNAD EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCHHHHCCCC LAMYHAKEEGRGNFKYYSSERNAQALYHLRLEADLRKAIEREEFELYYQPQIDIVQGDKF EEEEEECCCCCCCCEEECCCCCCEEEEEEEEHHHHHHHHCCCCEEEEECCEEEEEECCCE IGMEALIRWRHPQEGFIRPDIFIKVAESCGLIVDIDRWVLRQACLHGAKWIKAYSEPFKL ECHHHHHCCCCCCCCCCCCHHEEEEHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEE SVNISAVHFRQADFIEGIQQILLETQMPPSSLGLEITEGVLMKELQVAKSHLNQLKSLGI EEEEEEEEECHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCE EVAIDDFGTGYSSLAYLRHFDVNTLKIDRSFLIDIATNTADQAIVSSIIELARNLKLNVV EEEEECCCCCHHHHHHHHCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCEEEEE AEGIETVEQLEQVFSRGCYVIQGYYFAKPMSVRDFELYIAAANRVHD HHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]