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The map label for this gene is frdC [H]

Identifier: 120597330

GI number: 120597330

Start: 537265

End: 537936

Strand: Direct

Name: frdC [H]

Synonym: Sputw3181_0499

Alternate gene names: 120597330

Gene position: 537265-537936 (Clockwise)

Preceding gene: 120597329

Following gene: 120597331

Centisome position: 11.41

GC content: 46.58

Gene sequence:

>672_bases
ATGTCGATTAATTTAAAAATCAAAAAATGGAGTGCGTGGCTGGATTTAAGCCAGAGTTTATCGGGCGTCATTCTTGCTGT
CTTTTTGTGGACCCATTTAGTGCTAGTGTCATCGATTTTGTTCGGTGCGGATGCGATGAGTTGGGTTGCGCGCATGATGG
AGTTGAGTTTTTTATCTTCTGATGGTCATGGCTATCCTTGGGTTGTGACGTGTATCGCCATTGGTATTGCTGTTTTGGCT
TTTATTCATGTGCTTGTGGCGCTACAAAAACTGCCTATGAGTTTGCAGCAACAAAGGGCGCTACGCCAACAAATGCAGGT
GATCAAGCACAGCGATACTCGCTTGTGGCGTTGGCAGGCGATTACCGGTGTGGTGATTTTATTGCTGCTTCCTGTACATC
TGTGGCTGATTGGATCTGCCCCCGAAACTATTGGCCCCCAAGGCAGTGCTAATCGCATATGGAACCAAGGTGTGTGGATG
TTGTACTTGCCATTACTGTTGACGGTGGAGTTACATGCTGCCATTGGTATTTATCGTGTGGCTTTGAAATGGGGCGCAGC
GAGGGATCTCAACAGTCGTGCCCGATTACGAAAACTTAAGACAATTATCAGCGTGGTATTTGTATCAGTGGGTATTGCAT
CGCTGCTGGCATTTTTACCTCACGCAAGTTAA

Upstream 100 bases:

>100_bases
CTGTTGATTGATCTGTCTCAGGTTCTGTGATGGATTTGTGAGCGATATTAACTTTTAGCGTTGGATTTACTGGGGTTAGC
TCACTGGGCGAGGGCGTGAA

Downstream 100 bases:

>100_bases
ATAAATTCTAAGAAAAACATAGTTGTAGTTGATGTGTTATGAGAGAAAACCCGACAATAATAGCAAATCCCGTTAAGGAG
CAGGCGTGAAACTGATTTAT

Product: fumarate reductase respiratory complex, transmembrane subunit

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSINLKIKKWSAWLDLSQSLSGVILAVFLWTHLVLVSSILFGADAMSWVARMMELSFLSSDGHGYPWVVTCIAIGIAVLA
FIHVLVALQKLPMSLQQQRALRQQMQVIKHSDTRLWRWQAITGVVILLLLPVHLWLIGSAPETIGPQGSANRIWNQGVWM
LYLPLLLTVELHAAIGIYRVALKWGAARDLNSRARLRKLKTIISVVFVSVGIASLLAFLPHAS

Sequences:

>Translated_223_residues
MSINLKIKKWSAWLDLSQSLSGVILAVFLWTHLVLVSSILFGADAMSWVARMMELSFLSSDGHGYPWVVTCIAIGIAVLA
FIHVLVALQKLPMSLQQQRALRQQMQVIKHSDTRLWRWQAITGVVILLLLPVHLWLIGSAPETIGPQGSANRIWNQGVWM
LYLPLLLTVELHAAIGIYRVALKWGAARDLNSRARLRKLKTIISVVFVSVGIASLLAFLPHAS
>Mature_222_residues
SINLKIKKWSAWLDLSQSLSGVILAVFLWTHLVLVSSILFGADAMSWVARMMELSFLSSDGHGYPWVVTCIAIGIAVLAF
IHVLVALQKLPMSLQQQRALRQQMQVIKHSDTRLWRWQAITGVVILLLLPVHLWLIGSAPETIGPQGSANRIWNQGVWML
YLPLLLTVELHAAIGIYRVALKWGAARDLNSRARLRKLKTIISVVFVSVGIASLLAFLPHAS

Specific function: Di-heme cytochrome of the fumarate reductase complex [H]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004224
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 24846; Mature: 24715

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINLKIKKWSAWLDLSQSLSGVILAVFLWTHLVLVSSILFGADAMSWVARMMELSFLSS
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
DGHGYPWVVTCIAIGIAVLAFIHVLVALQKLPMSLQQQRALRQQMQVIKHSDTRLWRWQA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ITGVVILLLLPVHLWLIGSAPETIGPQGSANRIWNQGVWMLYLPLLLTVELHAAIGIYRV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ALKWGAARDLNSRARLRKLKTIISVVFVSVGIASLLAFLPHAS
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SINLKIKKWSAWLDLSQSLSGVILAVFLWTHLVLVSSILFGADAMSWVARMMELSFLSS
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
DGHGYPWVVTCIAIGIAVLAFIHVLVALQKLPMSLQQQRALRQQMQVIKHSDTRLWRWQA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ITGVVILLLLPVHLWLIGSAPETIGPQGSANRIWNQGVWMLYLPLLLTVELHAAIGIYRV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ALKWGAARDLNSRARLRKLKTIISVVFVSVGIASLLAFLPHAS
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]