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The map label for this gene is lafU [H]

Identifier: 120597323

GI number: 120597323

Start: 531725

End: 532642

Strand: Direct

Name: lafU [H]

Synonym: Sputw3181_0492

Alternate gene names: 120597323

Gene position: 531725-532642 (Clockwise)

Preceding gene: 120597322

Following gene: 120597324

Centisome position: 11.29

GC content: 45.32

Gene sequence:

>918_bases
ATGCTCCATAAAAATGAGCCGATTATTATCAAGCGGCGAAAGCGCGGAAAGCGTAATCATGGTCATGGTGGGGCGTGGAA
AGTGGCTTTTGCCGACTTTACTCTCGCGATGATGGCGCTCTTCATGGTCCTGTGGATCATGCAAATTGCCGATCAAAAAG
AGCGAACTATGATAGTGCAATATTTGCGTGGGGATATGAATCCAACGGGACCGATAAATCCATTTGAGCTAAGCCAATCA
TCCTCGATCATTGATCTGGAAGGAAATATGTCTATTGCTCCCACTATTATACCTTCTCACCCTTCTCCACGTGCTGGCGC
TGAAGGTATTGAGGAGGGCGCACTGATCCCTGGTCAATTTGATACTCAGGAACAACTCACTGTTTTAGCAAGGCAATTGA
ATCGAGTCGTACAAAGTTCGAGTATGGCGGAGAATATCACTGTCACTATAGTCCCCCAGGGTATCCGTATTTTGATCCAT
GATAATGTTAATCGATTTATGTTTACTCGCGGCAGTGCGCAGATGCAGCCCTATTTTGAAGAGTTACTGTTATCTTTAGG
GCCAATTTTAAAAAATATCACCAACAGCATGGTTATCTCTGGTCATACCGACTCCACGCCTTATGCCGGCAGTTTATTTA
CCAATTGGGAGTTATCGAGTGAAAGAGCACTATTAGCACGAAGAGTGCTTGAGCGTGGTGGTGTTAAGCGTGATCAGGTG
ATTCAGGTAACAGGTATGGCAGATCAGGTTCCTTATATTACTTCGGATACTGCTGCGGCGGCTAATCGTCGAATTGAGGC
GCTTATTTTAACCTCCTCTGCCGAGCAGTTATTAAGGGGCATGATAGGCGCGCCTAACGAGACTATCCAGAACGGTATTA
GCATTAACGATATAAAACGACAGACTATCGCACATTAG

Upstream 100 bases:

>100_bases
CCCCTATGATGGCGATTGATGCAGGGCGTAAGCAAATACAAAGTGAGAATCGTCCCTCGTTTATAGAATTAGAGCGTTGG
ATGGAGGGGCAGAGAAGCTA

Downstream 100 bases:

>100_bases
TGTTTGCACTTGTACTCATTTGTTAGGTATGACTATGAATATGTATGAAGAGTTTGTACATTCTGAGGATGAGGTTGAAC
CTACGCTTGAGTATCAAATT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MLHKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQYLRGDMNPTGPINPFELSQS
SSIIDLEGNMSIAPTIIPSHPSPRAGAEGIEEGALIPGQFDTQEQLTVLARQLNRVVQSSSMAENITVTIVPQGIRILIH
DNVNRFMFTRGSAQMQPYFEELLLSLGPILKNITNSMVISGHTDSTPYAGSLFTNWELSSERALLARRVLERGGVKRDQV
IQVTGMADQVPYITSDTAAAANRRIEALILTSSAEQLLRGMIGAPNETIQNGISINDIKRQTIAH

Sequences:

>Translated_305_residues
MLHKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQYLRGDMNPTGPINPFELSQS
SSIIDLEGNMSIAPTIIPSHPSPRAGAEGIEEGALIPGQFDTQEQLTVLARQLNRVVQSSSMAENITVTIVPQGIRILIH
DNVNRFMFTRGSAQMQPYFEELLLSLGPILKNITNSMVISGHTDSTPYAGSLFTNWELSSERALLARRVLERGGVKRDQV
IQVTGMADQVPYITSDTAAAANRRIEALILTSSAEQLLRGMIGAPNETIQNGISINDIKRQTIAH
>Mature_305_residues
MLHKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQYLRGDMNPTGPINPFELSQS
SSIIDLEGNMSIAPTIIPSHPSPRAGAEGIEEGALIPGQFDTQEQLTVLARQLNRVVQSSSMAENITVTIVPQGIRILIH
DNVNRFMFTRGSAQMQPYFEELLLSLGPILKNITNSMVISGHTDSTPYAGSLFTNWELSSERALLARRVLERGGVKRDQV
IQVTGMADQVPYITSDTAAAANRRIEALILTSSAEQLLRGMIGAPNETIQNGISINDIKRQTIAH

Specific function: Probable integral membrane protein required for the rotation of the flagellar motor. Might be a linker that fastens the torque-generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=292, Percent_Identity=32.1917808219178, Blast_Score=152, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 33754; Mature: 33754

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQ
CCCCCCCEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
YLRGDMNPTGPINPFELSQSSSIIDLEGNMSIAPTIIPSHPSPRAGAEGIEEGALIPGQF
HHHCCCCCCCCCCCCCCCCCCCEEEECCCCEECCEEECCCCCCCCCCCCCCCCCCCCCCC
DTQEQLTVLARQLNRVVQSSSMAENITVTIVPQGIRILIHDNVNRFMFTRGSAQMQPYFE
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCHHHH
ELLLSLGPILKNITNSMVISGHTDSTPYAGSLFTNWELSSERALLARRVLERGGVKRDQV
HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCE
IQVTGMADQVPYITSDTAAAANRRIEALILTSSAEQLLRGMIGAPNETIQNGISINDIKR
EEEECCCCCCCEEECCHHHHHCCCEEEEEEECCHHHHHHHHCCCCCHHHHCCCCHHHHHH
QTIAH
HHCCC
>Mature Secondary Structure
MLHKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQ
CCCCCCCEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
YLRGDMNPTGPINPFELSQSSSIIDLEGNMSIAPTIIPSHPSPRAGAEGIEEGALIPGQF
HHHCCCCCCCCCCCCCCCCCCCEEEECCCCEECCEEECCCCCCCCCCCCCCCCCCCCCCC
DTQEQLTVLARQLNRVVQSSSMAENITVTIVPQGIRILIHDNVNRFMFTRGSAQMQPYFE
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCHHHH
ELLLSLGPILKNITNSMVISGHTDSTPYAGSLFTNWELSSERALLARRVLERGGVKRDQV
HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCE
IQVTGMADQVPYITSDTAAAANRRIEALILTSSAEQLLRGMIGAPNETIQNGISINDIKR
EEEECCCCCCCEEECCHHHHHCCCEEEEEEECCHHHHHHHHCCCCCHHHHCCCCHHHHHH
QTIAH
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12620739; 8501040 [H]