Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597240

Identifier: 120597240

GI number: 120597240

Start: 451758

End: 452612

Strand: Direct

Name: 120597240

Synonym: Sputw3181_0409

Alternate gene names: NA

Gene position: 451758-452612 (Clockwise)

Preceding gene: 120597239

Following gene: 120597241

Centisome position: 9.59

GC content: 47.72

Gene sequence:

>855_bases
ATGACAAATGTGATTGCTTGTATTGACGGTTCAAATGTGACATCCGCTGTATGTGATGCCAGTGGCTGGGCCGCCTTTCA
ACTGAATGCCCCTGTAATCCTATTACATGTATTGGATAAGTCAGCCTATCCGATAGAGTCAGATCTGTCGGGAAATATTG
GCCTAGGTACACGGGAGCACTTGCTCAATGAAATGGTTGAGCTCGAAGCGCGCCGGGGCAAGCTGGCACTCGAGCAGGGT
AAGTATATGTTGCAAGATGCGCAAACGCGCATCGTGGAGGCACAACCTGCAGTCGTGGTTAAAACCTTGCAGCGTCACGG
CGATTTAGTCGAAACCCTGTTAGAGCAAGAATCCCATGCCAGATTGGTGGTGATGGGGCGTCAAGGGGAGCAACATCAAG
ATCAAGCGCAGGCGATTGGCAGCCATCTAGAAAACGTCATTCGCACAGTTAAGCAGCCTATTTTAGTGGTGATGACAGAG
TTTGAAGCACCGAAACGATTTATGATTGCCTACGATGGCAGCATTACTGCGAAAAAAGCCCTTAATCAAGTGCTAACAAG
TCCACTCTTAAAAGGGCTTGAATGTCATTTGGTGATGGTGTCTGATGCTCAATCACAGGCGACAGCAGAACTGGCGTTGG
TGACCGAATCTCTGATGGCGGCGAATTTCAATGTGGTTACCGCTGTTTGTCAGGGAGAAGTTCAAACGGCTCTTGAGATC
TATCAACTTGAGCATCACATCGATCTTATGGTGATGGGGGCCTACGGCCATTCGCGGATAAGAGAGTTTTTTGTGGGAAG
CAATACCACAAAGATGATCAGTAAAAGCCATATCCCATTATTATTATTGCGCTAA

Upstream 100 bases:

>100_bases
ATAGTCGATAAATTTGGGGTACACGATAAGCCAGAAGAAGTTGAAAAAATGATGTCTGGTCACTAAGCCATTAGCAACAC
AACAACAAAGGAATAAAACG

Downstream 100 bases:

>100_bases
CAGCTATTGATATTGCACTAATCAGTATCCAAGACGCTGGTTAGTGCATAGTAATAGAGATAGGTTCTGACGCTTAAGTT
TGGAGGTGAAATGAACGAGC

Product: UspA domain-containing protein

Products: NA

Alternate protein names: USP Slr1230 [H]

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTNVIACIDGSNVTSAVCDASGWAAFQLNAPVILLHVLDKSAYPIESDLSGNIGLGTREHLLNEMVELEARRGKLALEQG
KYMLQDAQTRIVEAQPAVVVKTLQRHGDLVETLLEQESHARLVVMGRQGEQHQDQAQAIGSHLENVIRTVKQPILVVMTE
FEAPKRFMIAYDGSITAKKALNQVLTSPLLKGLECHLVMVSDAQSQATAELALVTESLMAANFNVVTAVCQGEVQTALEI
YQLEHHIDLMVMGAYGHSRIREFFVGSNTTKMISKSHIPLLLLR

Sequences:

>Translated_284_residues
MTNVIACIDGSNVTSAVCDASGWAAFQLNAPVILLHVLDKSAYPIESDLSGNIGLGTREHLLNEMVELEARRGKLALEQG
KYMLQDAQTRIVEAQPAVVVKTLQRHGDLVETLLEQESHARLVVMGRQGEQHQDQAQAIGSHLENVIRTVKQPILVVMTE
FEAPKRFMIAYDGSITAKKALNQVLTSPLLKGLECHLVMVSDAQSQATAELALVTESLMAANFNVVTAVCQGEVQTALEI
YQLEHHIDLMVMGAYGHSRIREFFVGSNTTKMISKSHIPLLLLR
>Mature_283_residues
TNVIACIDGSNVTSAVCDASGWAAFQLNAPVILLHVLDKSAYPIESDLSGNIGLGTREHLLNEMVELEARRGKLALEQGK
YMLQDAQTRIVEAQPAVVVKTLQRHGDLVETLLEQESHARLVVMGRQGEQHQDQAQAIGSHLENVIRTVKQPILVVMTEF
EAPKRFMIAYDGSITAKKALNQVLTSPLLKGLECHLVMVSDAQSQATAELALVTESLMAANFNVVTAVCQGEVQTALEIY
QLEHHIDLMVMGAYGHSRIREFFVGSNTTKMISKSHIPLLLLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 31176; Mature: 31044

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNVIACIDGSNVTSAVCDASGWAAFQLNAPVILLHVLDKSAYPIESDLSGNIGLGTREH
CCCEEEEECCCCCHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH
LLNEMVELEARRGKLALEQGKYMLQDAQTRIVEAQPAVVVKTLQRHGDLVETLLEQESHA
HHHHHHHHHHHCCCEEHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHCCCCCC
RLVVMGRQGEQHQDQAQAIGSHLENVIRTVKQPILVVMTEFEAPKRFMIAYDGSITAKKA
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCHHHHH
LNQVLTSPLLKGLECHLVMVSDAQSQATAELALVTESLMAANFNVVTAVCQGEVQTALEI
HHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
YQLEHHIDLMVMGAYGHSRIREFFVGSNTTKMISKSHIPLLLLR
HHHHCCEEEEEEECCCHHHHHHHHCCCCHHHHHHCCCCCEEEEC
>Mature Secondary Structure 
TNVIACIDGSNVTSAVCDASGWAAFQLNAPVILLHVLDKSAYPIESDLSGNIGLGTREH
CCEEEEECCCCCHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH
LLNEMVELEARRGKLALEQGKYMLQDAQTRIVEAQPAVVVKTLQRHGDLVETLLEQESHA
HHHHHHHHHHHCCCEEHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHCCCCCC
RLVVMGRQGEQHQDQAQAIGSHLENVIRTVKQPILVVMTEFEAPKRFMIAYDGSITAKKA
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCHHHHH
LNQVLTSPLLKGLECHLVMVSDAQSQATAELALVTESLMAANFNVVTAVCQGEVQTALEI
HHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
YQLEHHIDLMVMGAYGHSRIREFFVGSNTTKMISKSHIPLLLLR
HHHHCCEEEEEEECCCHHHHHHHHCCCCHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]