Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597241

Identifier: 120597241

GI number: 120597241

Start: 452703

End: 453035

Strand: Direct

Name: 120597241

Synonym: Sputw3181_0410

Alternate gene names: NA

Gene position: 452703-453035 (Clockwise)

Preceding gene: 120597240

Following gene: 120597243

Centisome position: 9.61

GC content: 42.94

Gene sequence:

>333_bases
ATGAACGAGCAGCTAAAGCAACAACTGCATTTACAGTTACAGCAAATGCTGGAAAGTTTGTTAGCGCAGATTGCAGCACA
AACGAGTGATGTGCAAGTTGTCGAACTTGACCAATCACGACTCGGACGTCTTTCACGTATAGATGCATTGCAAGGACAGC
AAATGGAATTAGAAACTGCGAGACGCAAGCAGCATCAGTTACAAGTTATTGAAGGTGCATTATTGCGCATAAATAGCGAT
GAATATGGCAGCTGTTTTGTCTGTGGTGAAGATATCGATTTGAATCGGCTTATGTTTGATCCTACCGTGACTCGCTGCAT
TAACTGTTCGTAG

Upstream 100 bases:

>100_bases
ATTGCGCTAACAGCTATTGATATTGCACTAATCAGTATCCAAGACGCTGGTTAGTGCATAGTAATAGAGATAGGTTCTGA
CGCTTAAGTTTGGAGGTGAA

Downstream 100 bases:

>100_bases
AAATATTAATGTTAGGCTAAGGCTCTTTAGATAAGGAAAATTTATCATACCTATTGATGTTACGTTAATACAGTAAGGCT
AATTTTAAACGTCAATACAT

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TraR/DksA Family; DNAK Suppressor Protein; Transcriptional Regulator TraR/DksA Family Protein

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNEQLKQQLHLQLQQMLESLLAQIAAQTSDVQVVELDQSRLGRLSRIDALQGQQMELETARRKQHQLQVIEGALLRINSD
EYGSCFVCGEDIDLNRLMFDPTVTRCINCS

Sequences:

>Translated_110_residues
MNEQLKQQLHLQLQQMLESLLAQIAAQTSDVQVVELDQSRLGRLSRIDALQGQQMELETARRKQHQLQVIEGALLRINSD
EYGSCFVCGEDIDLNRLMFDPTVTRCINCS
>Mature_110_residues
MNEQLKQQLHLQLQQMLESLLAQIAAQTSDVQVVELDQSRLGRLSRIDALQGQQMELETARRKQHQLQVIEGALLRINSD
EYGSCFVCGEDIDLNRLMFDPTVTRCINCS

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12559; Mature: 12559

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQLKQQLHLQLQQMLESLLAQIAAQTSDVQVVELDQSRLGRLSRIDALQGQQMELETA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCHHHHHHHCCCCCHHHHHH
RRKQHQLQVIEGALLRINSDEYGSCFVCGEDIDLNRLMFDPTVTRCINCS
HHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCEEECCHHHHHCCCC
>Mature Secondary Structure
MNEQLKQQLHLQLQQMLESLLAQIAAQTSDVQVVELDQSRLGRLSRIDALQGQQMELETA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCHHHHHHHCCCCCHHHHHH
RRKQHQLQVIEGALLRINSDEYGSCFVCGEDIDLNRLMFDPTVTRCINCS
HHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCEEECCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA