| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597241
Identifier: 120597241
GI number: 120597241
Start: 452703
End: 453035
Strand: Direct
Name: 120597241
Synonym: Sputw3181_0410
Alternate gene names: NA
Gene position: 452703-453035 (Clockwise)
Preceding gene: 120597240
Following gene: 120597243
Centisome position: 9.61
GC content: 42.94
Gene sequence:
>333_bases ATGAACGAGCAGCTAAAGCAACAACTGCATTTACAGTTACAGCAAATGCTGGAAAGTTTGTTAGCGCAGATTGCAGCACA AACGAGTGATGTGCAAGTTGTCGAACTTGACCAATCACGACTCGGACGTCTTTCACGTATAGATGCATTGCAAGGACAGC AAATGGAATTAGAAACTGCGAGACGCAAGCAGCATCAGTTACAAGTTATTGAAGGTGCATTATTGCGCATAAATAGCGAT GAATATGGCAGCTGTTTTGTCTGTGGTGAAGATATCGATTTGAATCGGCTTATGTTTGATCCTACCGTGACTCGCTGCAT TAACTGTTCGTAG
Upstream 100 bases:
>100_bases ATTGCGCTAACAGCTATTGATATTGCACTAATCAGTATCCAAGACGCTGGTTAGTGCATAGTAATAGAGATAGGTTCTGA CGCTTAAGTTTGGAGGTGAA
Downstream 100 bases:
>100_bases AAATATTAATGTTAGGCTAAGGCTCTTTAGATAAGGAAAATTTATCATACCTATTGATGTTACGTTAATACAGTAAGGCT AATTTTAAACGTCAATACAT
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TraR/DksA Family; DNAK Suppressor Protein; Transcriptional Regulator TraR/DksA Family Protein
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MNEQLKQQLHLQLQQMLESLLAQIAAQTSDVQVVELDQSRLGRLSRIDALQGQQMELETARRKQHQLQVIEGALLRINSD EYGSCFVCGEDIDLNRLMFDPTVTRCINCS
Sequences:
>Translated_110_residues MNEQLKQQLHLQLQQMLESLLAQIAAQTSDVQVVELDQSRLGRLSRIDALQGQQMELETARRKQHQLQVIEGALLRINSD EYGSCFVCGEDIDLNRLMFDPTVTRCINCS >Mature_110_residues MNEQLKQQLHLQLQQMLESLLAQIAAQTSDVQVVELDQSRLGRLSRIDALQGQQMELETARRKQHQLQVIEGALLRINSD EYGSCFVCGEDIDLNRLMFDPTVTRCINCS
Specific function: Unknown
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12559; Mature: 12559
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQLKQQLHLQLQQMLESLLAQIAAQTSDVQVVELDQSRLGRLSRIDALQGQQMELETA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCHHHHHHHCCCCCHHHHHH RRKQHQLQVIEGALLRINSDEYGSCFVCGEDIDLNRLMFDPTVTRCINCS HHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCEEECCHHHHHCCCC >Mature Secondary Structure MNEQLKQQLHLQLQQMLESLLAQIAAQTSDVQVVELDQSRLGRLSRIDALQGQQMELETA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCHHHHHHHCCCCCHHHHHH RRKQHQLQVIEGALLRINSDEYGSCFVCGEDIDLNRLMFDPTVTRCINCS HHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCEEECCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA