Click here to switch to the map view.

The map label for this gene is fadL [C]

Identifier: 120597209

GI number: 120597209

Start: 408064

End: 409419

Strand: Direct

Name: fadL [C]

Synonym: Sputw3181_0378

Alternate gene names: 120597209

Gene position: 408064-409419 (Clockwise)

Preceding gene: 120597208

Following gene: 120597210

Centisome position: 8.67

GC content: 48.16

Gene sequence:

>1356_bases
ATGATAATGAAAAAACGTCTTCTGACTTTGGCTGTCACTGCAGCCTTGTTAAGTTCAACGACTCAACTCCATGCCGCTGG
TTTCCAATTGGCCGAATATTCTTCTACAGGTTTAGGCCGCGCCTTTGCAGGGGAAGCTGCTATGGCGGATAACGCCTCTG
CCCAAGGTCGAAATCCTGCCATGCTCACTTATTTAGAAGGACGTCAGCTTTCTGCGGGTGGTATTTATGTGATGCCAAAC
GTCGATGTGAAAGGTGATGTGAGCCTAAGCTCGCCGTTACTGGGGCCAGATCCCGTTAAAATGCAAGGCGGTGATGCTCT
GGATGTGGCCGATAGCGCGTTGGTGCCAAACTTTTATTATTCAAATCAGTTAAATGATCAATGGACTTGGGGCCTAGCGG
TAAACTCTAACTATGGCCTCGCCACAGAATTACCTGCAACCCACGCCGCGGCCATTTTTGGTAATAAGACCTCGGTAACG
ACCGTTGAGTTTAATCCTAATGTTGCTTATCGCATCAATGATGCAGTCAGTGTAGGCGGTGGTGTGCGAATCGTTTATGG
TGAAGGTGAAATTGGTGCTTCATTACCCGGTTGGGTCGATGGTATTAAACCGAGTTTACCTGCGCAAGTGGCTGCCATGT
TGCCCCCAGGCGGTACTGAGCTGAAGAGTATGAAGGGTGATGATATTGGCTATGGCTGGCAGTTAGGCGCAAGCTGGCAG
ATTACCCCCGCTCACCGTTTAGGTTTGGCTTACCATAGCGGCGTTAAGCTAGATCTTGATGGTCATGCTTCAGGTGTGAT
TTATACGGGTGGCCAAGATGTGTCTATCGAAGGTTATTTACCGCTTGAATTACCCGCATTTGCAGAAATTGCATCCCACC
ATCAACTGACCGATAACTGGGCCATGCATGCGAGTGTGAACTGGACCGATTGGAGTGTATTTGATCAGTTAGTGGCGTAT
TTCCCCGGCGAGGTTAAACCTAAGGGTGACTTAGAGTCTGATTTAGTGAAAGAAGAACACTTTGAAGATAACTGGCGTTT
CGCGCTGGGAACGACCTACCAAGTGAATAATGCTTGGTTAGTGCGTGCCGGTGTCGCTTTAGATAAAACGGCGGCAACAG
ATGAGTGGCGTACCACTACAATTCCTGACTCTGACCGTTTGTGGTTCTCTGTGGGCGCAGGTTATCAGGCTTCCAAAAAT
CTGAATGTTGATTTTGCAGTGACGTATATCAAAGCGACAGGCGATGCGCCCATCAACGAACAGCAAAATCTATTAAACTT
AGCGACAGTTAACTTTAACGGCGAAGCGAGCGGCAATGTATGGCTTGCGGGTATTCAAATGAGCTACAAGATGTAA

Upstream 100 bases:

>100_bases
AGTAAACTGCAGCGCATTCAATCTGGAGTGTTTACTCTATTTTGCCTGAATGCCGTAGTACTTATTTAAGTAGTACAGAT
AACAATAAGATAATTAGAGA

Downstream 100 bases:

>100_bases
GTTCGGTATGTTAAAAAAAGCCCTGAATCTTCAGGGCTTTTTTATGGCTAGAATAAAGTTCGTCGGGTTAGCTTACTGGT
CACGGCGGAAAATTCCGAAT

Product: aromatic hydrocarbon degradation membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MIMKKRLLTLAVTAALLSSTTQLHAAGFQLAEYSSTGLGRAFAGEAAMADNASAQGRNPAMLTYLEGRQLSAGGIYVMPN
VDVKGDVSLSSPLLGPDPVKMQGGDALDVADSALVPNFYYSNQLNDQWTWGLAVNSNYGLATELPATHAAAIFGNKTSVT
TVEFNPNVAYRINDAVSVGGGVRIVYGEGEIGASLPGWVDGIKPSLPAQVAAMLPPGGTELKSMKGDDIGYGWQLGASWQ
ITPAHRLGLAYHSGVKLDLDGHASGVIYTGGQDVSIEGYLPLELPAFAEIASHHQLTDNWAMHASVNWTDWSVFDQLVAY
FPGEVKPKGDLESDLVKEEHFEDNWRFALGTTYQVNNAWLVRAGVALDKTAATDEWRTTTIPDSDRLWFSVGAGYQASKN
LNVDFAVTYIKATGDAPINEQQNLLNLATVNFNGEASGNVWLAGIQMSYKM

Sequences:

>Translated_451_residues
MIMKKRLLTLAVTAALLSSTTQLHAAGFQLAEYSSTGLGRAFAGEAAMADNASAQGRNPAMLTYLEGRQLSAGGIYVMPN
VDVKGDVSLSSPLLGPDPVKMQGGDALDVADSALVPNFYYSNQLNDQWTWGLAVNSNYGLATELPATHAAAIFGNKTSVT
TVEFNPNVAYRINDAVSVGGGVRIVYGEGEIGASLPGWVDGIKPSLPAQVAAMLPPGGTELKSMKGDDIGYGWQLGASWQ
ITPAHRLGLAYHSGVKLDLDGHASGVIYTGGQDVSIEGYLPLELPAFAEIASHHQLTDNWAMHASVNWTDWSVFDQLVAY
FPGEVKPKGDLESDLVKEEHFEDNWRFALGTTYQVNNAWLVRAGVALDKTAATDEWRTTTIPDSDRLWFSVGAGYQASKN
LNVDFAVTYIKATGDAPINEQQNLLNLATVNFNGEASGNVWLAGIQMSYKM
>Mature_451_residues
MIMKKRLLTLAVTAALLSSTTQLHAAGFQLAEYSSTGLGRAFAGEAAMADNASAQGRNPAMLTYLEGRQLSAGGIYVMPN
VDVKGDVSLSSPLLGPDPVKMQGGDALDVADSALVPNFYYSNQLNDQWTWGLAVNSNYGLATELPATHAAAIFGNKTSVT
TVEFNPNVAYRINDAVSVGGGVRIVYGEGEIGASLPGWVDGIKPSLPAQVAAMLPPGGTELKSMKGDDIGYGWQLGASWQ
ITPAHRLGLAYHSGVKLDLDGHASGVIYTGGQDVSIEGYLPLELPAFAEIASHHQLTDNWAMHASVNWTDWSVFDQLVAY
FPGEVKPKGDLESDLVKEEHFEDNWRFALGTTYQVNNAWLVRAGVALDKTAATDEWRTTTIPDSDRLWFSVGAGYQASKN
LNVDFAVTYIKATGDAPINEQQNLLNLATVNFNGEASGNVWLAGIQMSYKM

Specific function: Involved In Translocation Of Long-Chain Fatty Acids Across The Outer Membrane. It Is A Receptor For The Bacteriophage T2. FADl May Form A Specific Channel. [C]

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ompP1/fadL family [H]

Homologues:

Organism=Escherichia coli, GI145693163, Length=478, Percent_Identity=35.1464435146443, Blast_Score=242, Evalue=4e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005017 [H]

Pfam domain/function: PF03349 Toluene_X [H]

EC number: NA

Molecular weight: Translated: 48313; Mature: 48313

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKKRLLTLAVTAALLSSTTQLHAAGFQLAEYSSTGLGRAFAGEAAMADNASAQGRNPA
CCCHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE
MLTYLEGRQLSAGGIYVMPNVDVKGDVSLSSPLLGPDPVKMQGGDALDVADSALVPNFYY
EEEEECCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCHHCCCEEE
SNQLNDQWTWGLAVNSNYGLATELPATHAAAIFGNKTSVTTVEFNPNVAYRINDAVSVGG
CCCCCCCEEEEEEEECCCCEEECCCCCEEEEEECCCCEEEEEEECCCEEEEECCEEECCC
GVRIVYGEGEIGASLPGWVDGIKPSLPAQVAAMLPPGGTELKSMKGDDIGYGWQLGASWQ
CEEEEEECCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCEEECCEEE
ITPAHRLGLAYHSGVKLDLDGHASGVIYTGGQDVSIEGYLPLELPAFAEIASHHQLTDNW
ECHHHHEEEEEECCEEEEECCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHCCCCCCCE
AMHASVNWTDWSVFDQLVAYFPGEVKPKGDLESDLVKEEHFEDNWRFALGTTYQVNNAWL
EEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEECCEEE
VRAGVALDKTAATDEWRTTTIPDSDRLWFSVGAGYQASKNLNVDFAVTYIKATGDAPINE
EEECCEECCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCC
QQNLLNLATVNFNGEASGNVWLAGIQMSYKM
CCCEEEEEEEEECCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MIMKKRLLTLAVTAALLSSTTQLHAAGFQLAEYSSTGLGRAFAGEAAMADNASAQGRNPA
CCCHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE
MLTYLEGRQLSAGGIYVMPNVDVKGDVSLSSPLLGPDPVKMQGGDALDVADSALVPNFYY
EEEEECCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCHHCCCEEE
SNQLNDQWTWGLAVNSNYGLATELPATHAAAIFGNKTSVTTVEFNPNVAYRINDAVSVGG
CCCCCCCEEEEEEEECCCCEEECCCCCEEEEEECCCCEEEEEEECCCEEEEECCEEECCC
GVRIVYGEGEIGASLPGWVDGIKPSLPAQVAAMLPPGGTELKSMKGDDIGYGWQLGASWQ
CEEEEEECCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCEEECCEEE
ITPAHRLGLAYHSGVKLDLDGHASGVIYTGGQDVSIEGYLPLELPAFAEIASHHQLTDNW
ECHHHHEEEEEECCEEEEECCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHCCCCCCCE
AMHASVNWTDWSVFDQLVAYFPGEVKPKGDLESDLVKEEHFEDNWRFALGTTYQVNNAWL
EEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEECCEEE
VRAGVALDKTAATDEWRTTTIPDSDRLWFSVGAGYQASKNLNVDFAVTYIKATGDAPINE
EEECCEECCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCC
QQNLLNLATVNFNGEASGNVWLAGIQMSYKM
CCCEEEEEEEEECCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]