| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597156
Identifier: 120597156
GI number: 120597156
Start: 353500
End: 353883
Strand: Direct
Name: 120597156
Synonym: Sputw3181_0325
Alternate gene names: NA
Gene position: 353500-353883 (Clockwise)
Preceding gene: 120597155
Following gene: 120597163
Centisome position: 7.51
GC content: 49.48
Gene sequence:
>384_bases ATGGCGTTCGTTAAGCTGCTAGTGAGTGGTGACATTGATGTGTTTGTACTGGTGGCAAAGCCCTGGGGAACACGCCGGTC CTATGAGAAGGAGCTCCATTCAGCTTATCTATTTGACTCAGTTCCCCCTGAGTTCATCCGTCGCCTTTCTCATATTCTAG ATGGCGTCTTGCTAGGTGGGCATATATCCCATGAGGGTGGTTGTGAAGTAATTTGCTCGATACCTAGAATGATTTCAGTA TTACGTGGCATGGGTTGTGACGTCACCCCAGATGAAAACTACGATACGATGCTTGAGCTGGCGGCTATTCCACTTACCGC TGCGCAAAAACGCGCTAGGCAGGCTGATATCAAGAAAGAGCGCGACGAGGGCATAGTCTACTAG
Upstream 100 bases:
>100_bases ATCGGAATTAATTAACGTTTTACTCGGTGTGGATTCTGGAGTTTTAAAAGGCCGTTGGCTCAACTTTTTATCAGACTAAT GATTCAAATGGAGGTGGAGG
Downstream 100 bases:
>100_bases AGATTTGCGATTTAAAGCGCTGTAGTGGTAATGGCTCAGGCCTAAAAACGATTAGACCTGAGCAGGGTACAACGCAGATT GTTGAAGTTTGGCTTGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MAFVKLLVSGDIDVFVLVAKPWGTRRSYEKELHSAYLFDSVPPEFIRRLSHILDGVLLGGHISHEGGCEVICSIPRMISV LRGMGCDVTPDENYDTMLELAAIPLTAAQKRARQADIKKERDEGIVY
Sequences:
>Translated_127_residues MAFVKLLVSGDIDVFVLVAKPWGTRRSYEKELHSAYLFDSVPPEFIRRLSHILDGVLLGGHISHEGGCEVICSIPRMISV LRGMGCDVTPDENYDTMLELAAIPLTAAQKRARQADIKKERDEGIVY >Mature_126_residues AFVKLLVSGDIDVFVLVAKPWGTRRSYEKELHSAYLFDSVPPEFIRRLSHILDGVLLGGHISHEGGCEVICSIPRMISVL RGMGCDVTPDENYDTMLELAAIPLTAAQKRARQADIKKERDEGIVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14159; Mature: 14027
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFVKLLVSGDIDVFVLVAKPWGTRRSYEKELHSAYLFDSVPPEFIRRLSHILDGVLLGG CCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC HISHEGGCEVICSIPRMISVLRGMGCDVTPDENYDTMLELAAIPLTAAQKRARQADIKKE CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH RDEGIVY CCCCCCC >Mature Secondary Structure AFVKLLVSGDIDVFVLVAKPWGTRRSYEKELHSAYLFDSVPPEFIRRLSHILDGVLLGG CCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC HISHEGGCEVICSIPRMISVLRGMGCDVTPDENYDTMLELAAIPLTAAQKRARQADIKKE CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH RDEGIVY CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA