Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597155

Identifier: 120597155

GI number: 120597155

Start: 352755

End: 353414

Strand: Direct

Name: 120597155

Synonym: Sputw3181_0324

Alternate gene names: NA

Gene position: 352755-353414 (Clockwise)

Preceding gene: 120597154

Following gene: 120597156

Centisome position: 7.49

GC content: 43.18

Gene sequence:

>660_bases
ATGGACTTCTTTGAATATTGGAACTCTTGCCTAGCAATGGGACTGACTAAGCACCCTGATGATCTAGTAGTGCTTGATGA
GCTTCATCATGATTTAAATAAAGCCATTGATTGCGAGTTTGAATTTGGCTTGCCACCGGGGCCTTTCTTTGGCCCTTTAA
AAACAGCGAAAATCGTGTTGTGCTACGCCAATCCTAGCCGTGATGAAAGCACTGCTGAGGTTGTCGCATCGACAGCATTG
AAAGAGCGGTTGTTTGCTCAACTTGATGGTTTACAGTCTTATCCTTATCAGATACCGGGTTGGGATAAATGGTTTAAGCC
AGTTGCCAATAGTTTGTTTGATGGGAATTGTGAACTGGCATCAAAGCATATCAGTGTGTTTAATTTAGTCCCTTATGCCT
CTACCAATATGGACCAAGTACAAAGTTTTGCCACCAGCTTGCCAAGTGTTTGGGCGGCACAAGAATACCTGAGGCGGACA
CTAATCCCGCAAGCTTTGAGAGAAGAAATTCTGTTGGTGATGTGCCGTTCTTCTCAATTGTGGGGGCTACAGACACCTCA
TAGGGCTAACAATATCGTGATTAACAAAACACGAATAGGATTTACCGATGACACCAAGATGCAGGTTAAATTATGGTGCC
GACAAATCGGAATTAATTAA

Upstream 100 bases:

>100_bases
AGGAAATGCAAAGAAAAAATAGCCACTCTTTTCCTTAATTCGGGATGTCGAGATTAAGGAATGTCACCTTGGTGGTTAAG
TTTTTAAGGATGGATAGAGC

Downstream 100 bases:

>100_bases
CGTTTTACTCGGTGTGGATTCTGGAGTTTTAAAAGGCCGTTGGCTCAACTTTTTATCAGACTAATGATTCAAATGGAGGT
GGAGGATGGCGTTCGTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDFFEYWNSCLAMGLTKHPDDLVVLDELHHDLNKAIDCEFEFGLPPGPFFGPLKTAKIVLCYANPSRDESTAEVVASTAL
KERLFAQLDGLQSYPYQIPGWDKWFKPVANSLFDGNCELASKHISVFNLVPYASTNMDQVQSFATSLPSVWAAQEYLRRT
LIPQALREEILLVMCRSSQLWGLQTPHRANNIVINKTRIGFTDDTKMQVKLWCRQIGIN

Sequences:

>Translated_219_residues
MDFFEYWNSCLAMGLTKHPDDLVVLDELHHDLNKAIDCEFEFGLPPGPFFGPLKTAKIVLCYANPSRDESTAEVVASTAL
KERLFAQLDGLQSYPYQIPGWDKWFKPVANSLFDGNCELASKHISVFNLVPYASTNMDQVQSFATSLPSVWAAQEYLRRT
LIPQALREEILLVMCRSSQLWGLQTPHRANNIVINKTRIGFTDDTKMQVKLWCRQIGIN
>Mature_219_residues
MDFFEYWNSCLAMGLTKHPDDLVVLDELHHDLNKAIDCEFEFGLPPGPFFGPLKTAKIVLCYANPSRDESTAEVVASTAL
KERLFAQLDGLQSYPYQIPGWDKWFKPVANSLFDGNCELASKHISVFNLVPYASTNMDQVQSFATSLPSVWAAQEYLRRT
LIPQALREEILLVMCRSSQLWGLQTPHRANNIVINKTRIGFTDDTKMQVKLWCRQIGIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24902; Mature: 24902

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFFEYWNSCLAMGLTKHPDDLVVLDELHHDLNKAIDCEFEFGLPPGPFFGPLKTAKIVL
CCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEE
CYANPSRDESTAEVVASTALKERLFAQLDGLQSYPYQIPGWDKWFKPVANSLFDGNCELA
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
SKHISVFNLVPYASTNMDQVQSFATSLPSVWAAQEYLRRTLIPQALREEILLVMCRSSQL
HHHHHHHEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WGLQTPHRANNIVINKTRIGFTDDTKMQVKLWCRQIGIN
CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFFEYWNSCLAMGLTKHPDDLVVLDELHHDLNKAIDCEFEFGLPPGPFFGPLKTAKIVL
CCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEE
CYANPSRDESTAEVVASTALKERLFAQLDGLQSYPYQIPGWDKWFKPVANSLFDGNCELA
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
SKHISVFNLVPYASTNMDQVQSFATSLPSVWAAQEYLRRTLIPQALREEILLVMCRSSQL
HHHHHHHEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WGLQTPHRANNIVINKTRIGFTDDTKMQVKLWCRQIGIN
CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA