| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597091
Identifier: 120597091
GI number: 120597091
Start: 282099
End: 283277
Strand: Direct
Name: 120597091
Synonym: Sputw3181_0260
Alternate gene names: NA
Gene position: 282099-283277 (Clockwise)
Preceding gene: 120597087
Following gene: 120597092
Centisome position: 5.99
GC content: 45.46
Gene sequence:
>1179_bases GTGAAACCTGCCACCTACAATACCGAAGCGTTCGATGATTGGATCCGCACTCGTTTCGTCGAGCTAAACTCCGAGCTTGA ACGGCTTTATTACCTGCAATCAGACCGCGCCAATGTGCTCAATATCGGCGATGAAGCGAAACAGCGGCTCGAATCTGAAG GGCGAGAACTGATAAAAACCTTGCTCGATGAAGGCAATACCGATGAAGGCTTTGATAGTGCATTTGATTTACTCGGTAAT GTTGGCCTGCATATGGCGGCCTGTCGTCGCCATGAAATTACCGAACCGTCGCGGGAAACCACCTCACCACTGGCCGAAGC CTCTGCACTGGCGATGCATATTGGTGCCTCCATTGGCGTTACGCCACGCTTTGCCACCGCGCATTTAACCACACACAATC GTGCTCATCGTGGTATCTATAAGCGTTTTACCGATTTGCCTGATGAAAAACTGTTTGTGGATTATAACACTAAGGGGATC TTAGCCTATAAACGTGCCGCGGATGCGTTATTGAAGATCCAACCGCTAGGAATTTCCCATCCAATAAGTTTGGATTTACT GCGTGTCGCTAAACAGGCATTACAGGATGTAATTGAATCGAATACCCAATTATTTAATCGATTAGATACAGACCGCTTCT TTTATTGTGTGCGTCCTTACTACAAACCTTATCGTGTAGGCTCCGTTGTTTATCGTGGGGCAAATGCTGGGGATTTTGCG GGGATTAATGTTATTGATCTGACATTAGGGCTTTGTTTTGCCAACGAGTCTTCCTACTCGCAAATGCTGGTGGATAAATT TTTATATATGATGCCAGAAGATCAGCAGCTACTACGGGAATGCATGCGCCGCCCTAACTTAATGGATGATTTTTTGCAGG CAAAGAATAGTGTTAACCAAGATTGGTATCAGCAAAATCTCAAACTCTTTATCGAGGTTTGTGAATTGCATGGTGCGACC GCAATTCAGCACCATAATCAATTAGTCACTAAATATATTGCCGAGCCTTCTACGACTATGGCTCAACAACATCTGGCTAA GGTCACTGCAAGTGGGCAACCATTATCTGTGCTGCTGGGTTCCCTCGAAAAACTTCGAGATAGGCGTGCAGCCACTAAAC GCAGTGATATTCGTACCCGCTATGATGATCTTAACTGTTTAAAAGAGAGTTTGAGGTAA
Upstream 100 bases:
>100_bases TTAACTTGACTCGGTGAATTCAGTTTATTGCAATGTGTAAACCCGTTAGACTGAAAACATCTCATCCAAAATAACGATAA CAATATCCAAGGATGTCCAA
Downstream 100 bases:
>100_bases TACCATGTTTAGCGATTTTAAAAAGGATTTTTGTCTCGCCAATCCCGGTTATTTGTTGAGCCACTCCGTAGGGCGTCCAC TTAAGTCAACCGAACAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKPATYNTEAFDDWIRTRFVELNSELERLYYLQSDRANVLNIGDEAKQRLESEGRELIKTLLDEGNTDEGFDSAFDLLGN VGLHMAACRRHEITEPSRETTSPLAEASALAMHIGASIGVTPRFATAHLTTHNRAHRGIYKRFTDLPDEKLFVDYNTKGI LAYKRAADALLKIQPLGISHPISLDLLRVAKQALQDVIESNTQLFNRLDTDRFFYCVRPYYKPYRVGSVVYRGANAGDFA GINVIDLTLGLCFANESSYSQMLVDKFLYMMPEDQQLLRECMRRPNLMDDFLQAKNSVNQDWYQQNLKLFIEVCELHGAT AIQHHNQLVTKYIAEPSTTMAQQHLAKVTASGQPLSVLLGSLEKLRDRRAATKRSDIRTRYDDLNCLKESLR
Sequences:
>Translated_392_residues MKPATYNTEAFDDWIRTRFVELNSELERLYYLQSDRANVLNIGDEAKQRLESEGRELIKTLLDEGNTDEGFDSAFDLLGN VGLHMAACRRHEITEPSRETTSPLAEASALAMHIGASIGVTPRFATAHLTTHNRAHRGIYKRFTDLPDEKLFVDYNTKGI LAYKRAADALLKIQPLGISHPISLDLLRVAKQALQDVIESNTQLFNRLDTDRFFYCVRPYYKPYRVGSVVYRGANAGDFA GINVIDLTLGLCFANESSYSQMLVDKFLYMMPEDQQLLRECMRRPNLMDDFLQAKNSVNQDWYQQNLKLFIEVCELHGAT AIQHHNQLVTKYIAEPSTTMAQQHLAKVTASGQPLSVLLGSLEKLRDRRAATKRSDIRTRYDDLNCLKESLR >Mature_392_residues MKPATYNTEAFDDWIRTRFVELNSELERLYYLQSDRANVLNIGDEAKQRLESEGRELIKTLLDEGNTDEGFDSAFDLLGN VGLHMAACRRHEITEPSRETTSPLAEASALAMHIGASIGVTPRFATAHLTTHNRAHRGIYKRFTDLPDEKLFVDYNTKGI LAYKRAADALLKIQPLGISHPISLDLLRVAKQALQDVIESNTQLFNRLDTDRFFYCVRPYYKPYRVGSVVYRGANAGDFA GINVIDLTLGLCFANESSYSQMLVDKFLYMMPEDQQLLRECMRRPNLMDDFLQAKNSVNQDWYQQNLKLFIEVCELHGAT AIQHHNQLVTKYIAEPSTTMAQQHLAKVTASGQPLSVLLGSLEKLRDRRAATKRSDIRTRYDDLNCLKESLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44662; Mature: 44662
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPATYNTEAFDDWIRTRFVELNSELERLYYLQSDRANVLNIGDEAKQRLESEGRELIKT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHH LLDEGNTDEGFDSAFDLLGNVGLHMAACRRHEITEPSRETTSPLAEASALAMHIGASIGV HHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC TPRFATAHLTTHNRAHRGIYKRFTDLPDEKLFVDYNTKGILAYKRAADALLKIQPLGISH CCCHHEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHEEECCCCCC PISLDLLRVAKQALQDVIESNTQLFNRLDTDRFFYCVRPYYKPYRVGSVVYRGANAGDFA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHEECCCCCCCC GINVIDLTLGLCFANESSYSQMLVDKFLYMMPEDQQLLRECMRRPNLMDDFLQAKNSVNQ CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCH DWYQQNLKLFIEVCELHGATAIQHHNQLVTKYIAEPSTTMAQQHLAKVTASGQPLSVLLG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH SLEKLRDRRAATKRSDIRTRYDDLNCLKESLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKPATYNTEAFDDWIRTRFVELNSELERLYYLQSDRANVLNIGDEAKQRLESEGRELIKT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHH LLDEGNTDEGFDSAFDLLGNVGLHMAACRRHEITEPSRETTSPLAEASALAMHIGASIGV HHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC TPRFATAHLTTHNRAHRGIYKRFTDLPDEKLFVDYNTKGILAYKRAADALLKIQPLGISH CCCHHEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHEEECCCCCC PISLDLLRVAKQALQDVIESNTQLFNRLDTDRFFYCVRPYYKPYRVGSVVYRGANAGDFA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHEECCCCCCCC GINVIDLTLGLCFANESSYSQMLVDKFLYMMPEDQQLLRECMRRPNLMDDFLQAKNSVNQ CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCH DWYQQNLKLFIEVCELHGATAIQHHNQLVTKYIAEPSTTMAQQHLAKVTASGQPLSVLLG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH SLEKLRDRRAATKRSDIRTRYDDLNCLKESLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA