| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is modA [H]
Identifier: 120597078
GI number: 120597078
Start: 270911
End: 271723
Strand: Direct
Name: modA [H]
Synonym: Sputw3181_0247
Alternate gene names: 120597078
Gene position: 270911-271723 (Clockwise)
Preceding gene: 120597077
Following gene: 120597079
Centisome position: 5.75
GC content: 45.39
Gene sequence:
>813_bases ATGGTGGGTTTAACTCGTTTTTTTAACTCAGTTTTTTTATCTGTTTGTTGTTTATTATCTACTTTATCTTTGAGCATCCA AGCGGCGACGAATACCAGTACCGCATCGGTTCCAGCGATTGCCGCTGCCTCTGATTTACGTTTTGCCCTAGATGAGATTA GCCAAAAATTCACCCATGAAACGGGGTTGAAAGTTAACATTTCCTATGGGTCATCGGGTAATTTTGCCACTCAAATTCAA AATGGTGCGCCCTTTGAGCTATTTTTATCTGCGGATGAAAAATATATTCAGCAATTGCACAGTGCCGGTATCGCCCGCGA TGCTGGTGTGCTTTATGCCCAAGGGCAACTCGCGATTGTTGTACCGAAAGCGGGGAGTTTGTCCGTTGACCCTGAACTTA AGGGGCTCGCTGAAGCACTCGCTGCAGGAAAAATTACCCGTTTTGCTATTGCTAATCCTGATCACGCTCCCTATGGCGAA AAGGCCAAAGAAGCATTGCAGTTTGTGCAGTTGTGGGATGCGATTCAACCTAAATTGATCCTTGGGGAAAATGTGTCCCA AGCCGGGCAGTTTGCGATAAGTGGTTCAACCCAGGGGGGAATTATTGCACTGTCTTTAGCTATGTCACCCACGTTTTCTA AACTGAGTGATTACGCCATAGTGCCAGCAAAAATGCATACTCCGCTGTTTCAGCGTATGGCATTAATGGCCAAGGCGGGT GAAACAGCCCAGCATTTTTATGATTATTTAAGAGCCGATAGCGCTCGTCGTATTTTGGCCGATTATGGTTTTTCATTACC AGAGCAACCATGA
Upstream 100 bases:
>100_bases CGAAAGATGCCGATGAGCAGGCGGCTAAATTGTGGCAAGCATAAAAGCTGGCGACAAACAGGCGTATATTGCTAACACAA ATTAATGGAAGATTGACAAC
Downstream 100 bases:
>100_bases TGGATTGGCAGGCACTTTGGTTATCGGTCAAGCTGAGTGGCATCACTGTTTTAGTGCTTATCCCCTTAGCTATTCTCGCT GGACGGGCATTAGCCTATCG
Product: molybdenum ABC transporter periplasmic molybdate-binding protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MVGLTRFFNSVFLSVCCLLSTLSLSIQAATNTSTASVPAIAAASDLRFALDEISQKFTHETGLKVNISYGSSGNFATQIQ NGAPFELFLSADEKYIQQLHSAGIARDAGVLYAQGQLAIVVPKAGSLSVDPELKGLAEALAAGKITRFAIANPDHAPYGE KAKEALQFVQLWDAIQPKLILGENVSQAGQFAISGSTQGGIIALSLAMSPTFSKLSDYAIVPAKMHTPLFQRMALMAKAG ETAQHFYDYLRADSARRILADYGFSLPEQP
Sequences:
>Translated_270_residues MVGLTRFFNSVFLSVCCLLSTLSLSIQAATNTSTASVPAIAAASDLRFALDEISQKFTHETGLKVNISYGSSGNFATQIQ NGAPFELFLSADEKYIQQLHSAGIARDAGVLYAQGQLAIVVPKAGSLSVDPELKGLAEALAAGKITRFAIANPDHAPYGE KAKEALQFVQLWDAIQPKLILGENVSQAGQFAISGSTQGGIIALSLAMSPTFSKLSDYAIVPAKMHTPLFQRMALMAKAG ETAQHFYDYLRADSARRILADYGFSLPEQP >Mature_270_residues MVGLTRFFNSVFLSVCCLLSTLSLSIQAATNTSTASVPAIAAASDLRFALDEISQKFTHETGLKVNISYGSSGNFATQIQ NGAPFELFLSADEKYIQQLHSAGIARDAGVLYAQGQLAIVVPKAGSLSVDPELKGLAEALAAGKITRFAIANPDHAPYGE KAKEALQFVQLWDAIQPKLILGENVSQAGQFAISGSTQGGIIALSLAMSPTFSKLSDYAIVPAKMHTPLFQRMALMAKAG ETAQHFYDYLRADSARRILADYGFSLPEQP
Specific function: Involved in the transport of molybdenum into the cell [H]
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein modA family [H]
Homologues:
Organism=Escherichia coli, GI1786979, Length=227, Percent_Identity=31.7180616740088, Blast_Score=95, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005950 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 28808; Mature: 28808
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGLTRFFNSVFLSVCCLLSTLSLSIQAATNTSTASVPAIAAASDLRFALDEISQKFTHE CCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC TGLKVNISYGSSGNFATQIQNGAPFELFLSADEKYIQQLHSAGIARDAGVLYAQGQLAIV CCCEEEEEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEECCEEEEE VPKAGSLSVDPELKGLAEALAAGKITRFAIANPDHAPYGEKAKEALQFVQLWDAIQPKLI EECCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEE LGENVSQAGQFAISGSTQGGIIALSLAMSPTFSKLSDYAIVPAKMHTPLFQRMALMAKAG ECCCCHHCCCEEECCCCCCCEEEEEEECCCCHHHHCCCEEECHHHCCHHHHHHHHHHHCC ETAQHFYDYLRADSARRILADYGFSLPEQP CHHHHHHHHHHCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MVGLTRFFNSVFLSVCCLLSTLSLSIQAATNTSTASVPAIAAASDLRFALDEISQKFTHE CCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC TGLKVNISYGSSGNFATQIQNGAPFELFLSADEKYIQQLHSAGIARDAGVLYAQGQLAIV CCCEEEEEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEECCEEEEE VPKAGSLSVDPELKGLAEALAAGKITRFAIANPDHAPYGEKAKEALQFVQLWDAIQPKLI EECCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEE LGENVSQAGQFAISGSTQGGIIALSLAMSPTFSKLSDYAIVPAKMHTPLFQRMALMAKAG ECCCCHHCCCEEECCCCCCCEEEEEEECCCCHHHHCCCEEECHHHCCHHHHHHHHHHHCC ETAQHFYDYLRADSARRILADYGFSLPEQP CHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8491722 [H]