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The map label for this gene is birA [H]

Identifier: 120596973

GI number: 120596973

Start: 169428

End: 170387

Strand: Direct

Name: birA [H]

Synonym: Sputw3181_0140

Alternate gene names: 120596973

Gene position: 169428-170387 (Clockwise)

Preceding gene: 120596972

Following gene: 120596975

Centisome position: 3.6

GC content: 43.02

Gene sequence:

>960_bases
ATGTCTGATAACTGGGTAAGAAAGCGTGAAATTTTAACGCTATTATCTAGCGAGCATTTTGTCTCGGGCGAACAGCTTGC
GAGCGAGTTAGGCATATCTCGTGCTGCTGTGAGTAAACATATAGATGCGTTAGAAACCTATGGTGTTGCAATTTATAGTG
TCAAAGGTCGTGGCTATAAACTTGCGAATCCGATTTCATTGATTGATGCGTCACGTTTAGTGCAATCGATTGATCATCGC
TGTTTTTATTTTGATGAAATTCCAAGCACTAATGGATTTATGCTCAGTCACATAAACGAGCTGAAGAGTGGAGATGTTTG
TGTAGCCGAGTATCAAGCGGCAGGTCGAGGACGTCGAGGACGAACTTGGGTGTCGCCCTATGGCCATCATTTGTATTTTT
CACTATTTTGGTCATTTCCACAGGGGATGGCGCAGGCAATGGGCTTGAGTTTAGTCGTAGCCTGTACGTTGGTTGAAGTA
CTTAAATCCTATGGCGTTGAGAATATTGGCGTTAAGTGGCCCAATGATATCTATTTGGATCATAAAAAACTGGCTGGGAT
TTTAATTGAAATGGCAGGGCAAGCGGATAGCGAGTGCCAGCTTATTATCGGAATTGGCGTCAATATGGCGATGTCTGAGG
ATCATGGAAAAGGAATAGACCAACCTTGGAGTGATCTATCAACATTAGCGACTATGCCAGATAAGACAGACCTAGTGATT
GAATTACAAAAACAACTTAAGCGAGATATTCAGTTATTTGAACGTGAAGGGCTGAATGCATTTAAAACGCGATGGCAAGC
TGCAGATTTATTTTATGGTAAACCAATCCGTTTACTCATGGGGGAAAATCATATTGATGGCATTTGCATGGGCGTAGATG
CGCAAGGGGCGGTATTACTCGACACCGCCGATGGTATTCAAGCATTTATCGGCGGAGAAATTAGTCTTAGACCCCGTTAG

Upstream 100 bases:

>100_bases
CGTTTAGCGCAACATGTTATTGAGCGCGTCAATGATACGTTTGGTGTATTGCTAGAAGCGGAACCAAAAATTATCGGAGT
CACAGGTGAAGGAGATCTGC

Downstream 100 bases:

>100_bases
CTTAGGGGTACTACTTGCGCATGAGCACATGGGACATCAAATGATCTTGCCCCTTTTGTAGGATCAAATGTGCTCTTTCC
CGCGTGGGTTGAATGTTCAG

Product: biotin--protein ligase

Products: NA

Alternate protein names: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase; Biotin--protein ligase [H]

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSDNWVRKREILTLLSSEHFVSGEQLASELGISRAAVSKHIDALETYGVAIYSVKGRGYKLANPISLIDASRLVQSIDHR
CFYFDEIPSTNGFMLSHINELKSGDVCVAEYQAAGRGRRGRTWVSPYGHHLYFSLFWSFPQGMAQAMGLSLVVACTLVEV
LKSYGVENIGVKWPNDIYLDHKKLAGILIEMAGQADSECQLIIGIGVNMAMSEDHGKGIDQPWSDLSTLATMPDKTDLVI
ELQKQLKRDIQLFEREGLNAFKTRWQAADLFYGKPIRLLMGENHIDGICMGVDAQGAVLLDTADGIQAFIGGEISLRPR

Sequences:

>Translated_319_residues
MSDNWVRKREILTLLSSEHFVSGEQLASELGISRAAVSKHIDALETYGVAIYSVKGRGYKLANPISLIDASRLVQSIDHR
CFYFDEIPSTNGFMLSHINELKSGDVCVAEYQAAGRGRRGRTWVSPYGHHLYFSLFWSFPQGMAQAMGLSLVVACTLVEV
LKSYGVENIGVKWPNDIYLDHKKLAGILIEMAGQADSECQLIIGIGVNMAMSEDHGKGIDQPWSDLSTLATMPDKTDLVI
ELQKQLKRDIQLFEREGLNAFKTRWQAADLFYGKPIRLLMGENHIDGICMGVDAQGAVLLDTADGIQAFIGGEISLRPR
>Mature_318_residues
SDNWVRKREILTLLSSEHFVSGEQLASELGISRAAVSKHIDALETYGVAIYSVKGRGYKLANPISLIDASRLVQSIDHRC
FYFDEIPSTNGFMLSHINELKSGDVCVAEYQAAGRGRRGRTWVSPYGHHLYFSLFWSFPQGMAQAMGLSLVVACTLVEVL
KSYGVENIGVKWPNDIYLDHKKLAGILIEMAGQADSECQLIIGIGVNMAMSEDHGKGIDQPWSDLSTLATMPDKTDLVIE
LQKQLKRDIQLFEREGLNAFKTRWQAADLFYGKPIRLLMGENHIDGICMGVDAQGAVLLDTADGIQAFIGGEISLRPR

Specific function: BirA acts both as a biotin-operon repressor and as the enzyme that synthesizes the corepressor, acetyl-CoA:carbon-dioxide ligase. This protein also activates biotin to form biotinyl-5'- adenylate and transfers the biotin moiety to biotin-accepting protein

COG id: COG0340

COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the biotin--protein ligase family [H]

Homologues:

Organism=Escherichia coli, GI1790408, Length=318, Percent_Identity=44.9685534591195, Blast_Score=293, Evalue=1e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004408
- InterPro:   IPR004409
- InterPro:   IPR003142
- InterPro:   IPR004143
- InterPro:   IPR013196
- InterPro:   IPR008988
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02237 BPL_C; PF03099 BPL_LipA_LipB; PF08279 HTH_11 [H]

EC number: =6.3.4.15 [H]

Molecular weight: Translated: 35340; Mature: 35209

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNWVRKREILTLLSSEHFVSGEQLASELGISRAAVSKHIDALETYGVAIYSVKGRGYK
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCCCEE
LANPISLIDASRLVQSIDHRCFYFDEIPSTNGFMLSHINELKSGDVCVAEYQAAGRGRRG
CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEEHHHCCCCCCC
RTWVSPYGHHLYFSLFWSFPQGMAQAMGLSLVVACTLVEVLKSYGVENIGVKWPNDIYLD
CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
HKKLAGILIEMAGQADSECQLIIGIGVNMAMSEDHGKGIDQPWSDLSTLATMPDKTDLVI
HHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHH
ELQKQLKRDIQLFEREGLNAFKTRWQAADLFYGKPIRLLMGENHIDGICMGVDAQGAVLL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCCEEEE
DTADGIQAFIGGEISLRPR
ECCCCHHHHHCCEEEECCC
>Mature Secondary Structure 
SDNWVRKREILTLLSSEHFVSGEQLASELGISRAAVSKHIDALETYGVAIYSVKGRGYK
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCCCEE
LANPISLIDASRLVQSIDHRCFYFDEIPSTNGFMLSHINELKSGDVCVAEYQAAGRGRRG
CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEEHHHCCCCCCC
RTWVSPYGHHLYFSLFWSFPQGMAQAMGLSLVVACTLVEVLKSYGVENIGVKWPNDIYLD
CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
HKKLAGILIEMAGQADSECQLIIGIGVNMAMSEDHGKGIDQPWSDLSTLATMPDKTDLVI
HHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHH
ELQKQLKRDIQLFEREGLNAFKTRWQAADLFYGKPIRLLMGENHIDGICMGVDAQGAVLL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCCEEEE
DTADGIQAFIGGEISLRPR
ECCCCHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3899863; 3536662; 8265357; 9278503; 1311302; 1328157; 1409631; 11353844 [H]