Click here to switch to the map view.

The map label for this gene is yigZ [H]

Identifier: 120596848

GI number: 120596848

Start: 21088

End: 21702

Strand: Direct

Name: yigZ [H]

Synonym: Sputw3181_0015

Alternate gene names: 120596848

Gene position: 21088-21702 (Clockwise)

Preceding gene: 120596847

Following gene: 120596849

Centisome position: 0.45

GC content: 43.74

Gene sequence:

>615_bases
GTGCTCGACAGTTACCTTATCCCGAGTGAAAATATTCAGATTGAAGAAGAGATAAAGCATAGCCGCTTTATCTCTTTTAT
CTTTCATTGCGATAGTATTGATAAATTAAAGTTAGTGCTCACTGACATAAAGCGTGATTACCCCGGCGCAAGCCACTACT
GCTATGCTTTTATCGCTGGCGCACCAATCGACACTGTATTGATTGGCTCAAGTGATGACGGTGAACCCGCTGGCAGTGCT
GGCCGCCCTATGCTCGCTGTTTTACAAGGTGCAAATATTGGTGAAGTTGCTGCTGTGGTTGTGCGCTATTATGGCGGTAC
TAAACTTGGTGTGGGAGGCTTAGTTCGAGCCTATACTTCTGGTTTAAGACTTGGATTGACCAAGCTATCAATGCAAACAA
AGCAGCTGCGTTATCCTGCAAGGCTACAGTGTGACTACTCGCAACTAAGGGATGTAGAATATTCATTACAGCAAGTTGAT
GCCGTTATGATCAATAAGCAGTTTGCTGAAGTTGTCTATATTGAGTTTGAAATAGGAAAGCTACAGCAAGAAAGGTTCAG
CGAATTATTGATGACCTTGAGCCAAGGCAGCTTAAGTGCCGAGTTTGAACTGTGA

Upstream 100 bases:

>100_bases
TATCGAAGATAACGTCATAGTGCATCAAGATAGAAACGAGAATATGACCCGCGAGCTCGGCTTAGCCGATTGATCATAGG
GCAAAGTTTAGGACGATCTT

Downstream 100 bases:

>100_bases
TGCCCGCGCAAATTATGCCAAAATAGCCAAAATGCTGAAAATACCTTTACAGCCAATGGAATAATTGAACTCGCTTAATG
CAATATAAAACCATAATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLDSYLIPSENIQIEEEIKHSRFISFIFHCDSIDKLKLVLTDIKRDYPGASHYCYAFIAGAPIDTVLIGSSDDGEPAGSA
GRPMLAVLQGANIGEVAAVVVRYYGGTKLGVGGLVRAYTSGLRLGLTKLSMQTKQLRYPARLQCDYSQLRDVEYSLQQVD
AVMINKQFAEVVYIEFEIGKLQQERFSELLMTLSQGSLSAEFEL

Sequences:

>Translated_204_residues
MLDSYLIPSENIQIEEEIKHSRFISFIFHCDSIDKLKLVLTDIKRDYPGASHYCYAFIAGAPIDTVLIGSSDDGEPAGSA
GRPMLAVLQGANIGEVAAVVVRYYGGTKLGVGGLVRAYTSGLRLGLTKLSMQTKQLRYPARLQCDYSQLRDVEYSLQQVD
AVMINKQFAEVVYIEFEIGKLQQERFSELLMTLSQGSLSAEFEL
>Mature_204_residues
MLDSYLIPSENIQIEEEIKHSRFISFIFHCDSIDKLKLVLTDIKRDYPGASHYCYAFIAGAPIDTVLIGSSDDGEPAGSA
GRPMLAVLQGANIGEVAAVVVRYYGGTKLGVGGLVRAYTSGLRLGLTKLSMQTKQLRYPARLQCDYSQLRDVEYSLQQVD
AVMINKQFAEVVYIEFEIGKLQQERFSELLMTLSQGSLSAEFEL

Specific function: Unknown

COG id: COG1739

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IMPACT family [H]

Homologues:

Organism=Escherichia coli, GI87082338, Length=197, Percent_Identity=43.6548223350254, Blast_Score=159, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009022
- InterPro:   IPR020568
- InterPro:   IPR000640
- InterPro:   IPR015796
- InterPro:   IPR015269
- InterPro:   IPR020569
- InterPro:   IPR001498 [H]

Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]

EC number: NA

Molecular weight: Translated: 22644; Mature: 22644

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00910 UPF0029

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDSYLIPSENIQIEEEIKHSRFISFIFHCDSIDKLKLVLTDIKRDYPGASHYCYAFIAG
CCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEC
APIDTVLIGSSDDGEPAGSAGRPMLAVLQGANIGEVAAVVVRYYGGTKLGVGGLVRAYTS
CCEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEECHHHHHHHHHH
GLRLGLTKLSMQTKQLRYPARLQCDYSQLRDVEYSLQQVDAVMINKQFAEVVYIEFEIGK
HHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCH
LQQERFSELLMTLSQGSLSAEFEL
HHHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MLDSYLIPSENIQIEEEIKHSRFISFIFHCDSIDKLKLVLTDIKRDYPGASHYCYAFIAG
CCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEC
APIDTVLIGSSDDGEPAGSAGRPMLAVLQGANIGEVAAVVVRYYGGTKLGVGGLVRAYTS
CCEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEECHHHHHHHHHH
GLRLGLTKLSMQTKQLRYPARLQCDYSQLRDVEYSLQQVDAVMINKQFAEVVYIEFEIGK
HHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCH
LQQERFSELLMTLSQGSLSAEFEL
HHHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2243799; 1379743; 9278503; 8313894 [H]