| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is insN1 [C]
Identifier: 119947270
GI number: 119947270
Start: 4482142
End: 4482447
Strand: Reverse
Name: insN1 [C]
Synonym: Ping_3669
Alternate gene names: 119947270
Gene position: 4482447-4482142 (Counterclockwise)
Preceding gene: 119947272
Following gene: 119947269
Centisome position: 98.31
GC content: 39.22
Gene sequence:
>306_bases TTGGATAATACAATCCACTATCGAGGTGAACATGAATACAAAACTTATACGAGTGAATTTAAAACAGAAGCATTAGGGTT AATCAGTGAGCAAGGTTATAGCGTTCAGGAGGCCGCTTCTGCTTTAGGTATCACAACTAGCCTGCTTTATAGCTGGAAAC AAAAAGCCGAAGAGCATGCCAATTCAACGGTAAATTCTGATGAGCGGACGGAGTTATTATCCTTGCGAAAAGAAGTTAAA CAGCTTCGTATGGAGAAAGAAATACTAAAAAAGGCCAGTGCCTTCTTCGCAAAAGAAATGAAGTAA
Upstream 100 bases:
>100_bases TGGTTTCATGTATGCGTAACGCTTGAGCAATCATGTGTGTTGACCAATCCTCATCGCGCAGTAAAACTATTCTGGTTTAA TTGAACTGGACACTTTAATT
Downstream 100 bases:
>100_bases AGTTTCGATATATTCGAGCATGTCGCTCTAAATATCCAATAAAACTACTTTGTAATGTACTACAAGTGAGTCGTAGTGCA TTTTATGATTGGCTTGAACG
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: ISSod1 Transposase OrfA; Transposase And Inactivated Derivatives; ISPsy26 Transposase OrfA; Transposase IS; Transposon Related ORF HTH Transcriptional Regulator; ISXac3 Like Transposase; Transposase OrfA For Insertion Sequence Element
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MDNTIHYRGEHEYKTYTSEFKTEALGLISEQGYSVQEAASALGITTSLLYSWKQKAEEHANSTVNSDERTELLSLRKEVK QLRMEKEILKKASAFFAKEMK
Sequences:
>Translated_101_residues MDNTIHYRGEHEYKTYTSEFKTEALGLISEQGYSVQEAASALGITTSLLYSWKQKAEEHANSTVNSDERTELLSLRKEVK QLRMEKEILKKASAFFAKEMK >Mature_101_residues MDNTIHYRGEHEYKTYTSEFKTEALGLISEQGYSVQEAASALGITTSLLYSWKQKAEEHANSTVNSDERTELLSLRKEVK QLRMEKEILKKASAFFAKEMK
Specific function: Involved in the transposition of the insertion sequence is911 [C]
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11623; Mature: 11623
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNTIHYRGEHEYKTYTSEFKTEALGLISEQGYSVQEAASALGITTSLLYSWKQKAEEHA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NSTVNSDERTELLSLRKEVKQLRMEKEILKKASAFFAKEMK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDNTIHYRGEHEYKTYTSEFKTEALGLISEQGYSVQEAASALGITTSLLYSWKQKAEEHA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NSTVNSDERTELLSLRKEVKQLRMEKEILKKASAFFAKEMK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA