| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119947272
Identifier: 119947272
GI number: 119947272
Start: 4484121
End: 4484885
Strand: Reverse
Name: 119947272
Synonym: Ping_3672
Alternate gene names: NA
Gene position: 4484885-4484121 (Counterclockwise)
Preceding gene: 119947273
Following gene: 119947270
Centisome position: 98.36
GC content: 40.52
Gene sequence:
>765_bases ATGAAGATCAAATCTAGAAATTATCGTGTTGGGCTAATTGTGCCTAGTTCAAATATTACAATGGAAACCGAAATACCTTC ACTATTGCGTGGTCGTGAAGCAATTTTACCTGAACGTTTTACGTTTCACTCCTCTCGCATGAGAATGAAAAGTGTTACAA AAGAAGAGCTTGAGCGAATGGATGATGATAGTTTGCGTTGCGCATTAGAATTATCCGATGCAGCGGTTGATGTACAAGCT TACGCTTGTCTCGTTGCGATTATGAGCCGAGGTAAAGGTTACCATCGAGTGGCGGAAGAAAGGTTATACAGAGTAAGCTT GGAAAATGGTATACCTGCTCCTGTTATTAGTTCAGCAGGTGCATTAGTTGAAAGCCTACATGAGATAGGTGCTAAGAAAG TATCCATCATTTGTCCCTATATGAAACCGCTCTCTCGACTGGTGGTAAACTATATTGAAAGTGAAGGGATAGAAGTTCAA GATTACCTGGCATTAGAAATTCCCGATAATTTAAAAGTTGGGGCCCAAGATCCAAATGCACCAACTGAATTGTGGAAAAA ACTTGACGTTACTGGTATCGATGCCATTGTTGCTTCTGCTTGTGTACAAATGCCATCGTTACAATCAATTGAAAAAATTG AAAGAGCTTCTGGTTTACCAACATTATCTGCTGCGGTAGCCACAACCCGTAGTATTTTAAAAGCACTCAAACTCGACCCT GTAGCACCAGGGGGAGGCACATTATTAACACCAAGTAATTCATAA
Upstream 100 bases:
>100_bases TTGTTTTACTCTGCTTGTTCCCTAGCATTGCTACATGGCTACCTGAGGCCGTAATGGGCTCAGCTATATAATATAATTTA ATTATTAAGGAGTATTAGCT
Downstream 100 bases:
>100_bases GTAATTCATGAGTAATTCATGAAATAATTTTTTAAGTCAATGACTCGTCCTAGCATGGGTTAACACATTTTGAATTAAAA CGCCTGATGAACTTCATCGG
Product: maleate cis-trans isomerase
Products: fumarate
Alternate protein names: Maleate Cis-Trans Isomerase; Asp/Glu/Hydantoin Racemase; Arylmalonate Decarboxylase; Asp/Glu/Hydantoin Racemase Family Protein; Maleate Cis-Trans Isomerase Protein; Asp/Glu/Hydantoin Racemase Family; Racemase; Decarboxylase; Maleate Isomerase; Ectoine Utilization Protein EutA; Cis-Trans Isomerase
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MKIKSRNYRVGLIVPSSNITMETEIPSLLRGREAILPERFTFHSSRMRMKSVTKEELERMDDDSLRCALELSDAAVDVQA YACLVAIMSRGKGYHRVAEERLYRVSLENGIPAPVISSAGALVESLHEIGAKKVSIICPYMKPLSRLVVNYIESEGIEVQ DYLALEIPDNLKVGAQDPNAPTELWKKLDVTGIDAIVASACVQMPSLQSIEKIERASGLPTLSAAVATTRSILKALKLDP VAPGGGTLLTPSNS
Sequences:
>Translated_254_residues MKIKSRNYRVGLIVPSSNITMETEIPSLLRGREAILPERFTFHSSRMRMKSVTKEELERMDDDSLRCALELSDAAVDVQA YACLVAIMSRGKGYHRVAEERLYRVSLENGIPAPVISSAGALVESLHEIGAKKVSIICPYMKPLSRLVVNYIESEGIEVQ DYLALEIPDNLKVGAQDPNAPTELWKKLDVTGIDAIVASACVQMPSLQSIEKIERASGLPTLSAAVATTRSILKALKLDP VAPGGGTLLTPSNS >Mature_254_residues MKIKSRNYRVGLIVPSSNITMETEIPSLLRGREAILPERFTFHSSRMRMKSVTKEELERMDDDSLRCALELSDAAVDVQA YACLVAIMSRGKGYHRVAEERLYRVSLENGIPAPVISSAGALVESLHEIGAKKVSIICPYMKPLSRLVVNYIESEGIEVQ DYLALEIPDNLKVGAQDPNAPTELWKKLDVTGIDAIVASACVQMPSLQSIEKIERASGLPTLSAAVATTRSILKALKLDP VAPGGGTLLTPSNS
Specific function: Unknown
COG id: COG3473
COG function: function code Q; Maleate cis-trans isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.2.1.1
Molecular weight: Translated: 27647; Mature: 27647
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKSRNYRVGLIVPSSNITMETEIPSLLRGREAILPERFTFHSSRMRMKSVTKEELERM CCCCCCCEEEEEEECCCCCEEECCCHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHC DDDSLRCALELSDAAVDVQAYACLVAIMSRGKGYHRVAEERLYRVSLENGIPAPVISSAG CCCHHEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH ALVESLHEIGAKKVSIICPYMKPLSRLVVNYIESEGIEVQDYLALEIPDNLKVGAQDPNA HHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEHEEEEECCCCCEECCCCCCC PTELWKKLDVTGIDAIVASACVQMPSLQSIEKIERASGLPTLSAAVATTRSILKALKLDP HHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC VAPGGGTLLTPSNS CCCCCCEEECCCCC >Mature Secondary Structure MKIKSRNYRVGLIVPSSNITMETEIPSLLRGREAILPERFTFHSSRMRMKSVTKEELERM CCCCCCCEEEEEEECCCCCEEECCCHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHC DDDSLRCALELSDAAVDVQAYACLVAIMSRGKGYHRVAEERLYRVSLENGIPAPVISSAG CCCHHEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH ALVESLHEIGAKKVSIICPYMKPLSRLVVNYIESEGIEVQDYLALEIPDNLKVGAQDPNA HHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEHEEEEECCCCCEECCCCCCC PTELWKKLDVTGIDAIVASACVQMPSLQSIEKIERASGLPTLSAAVATTRSILKALKLDP HHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC VAPGGGTLLTPSNS CCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: maleate
Specific reaction: maleate = fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA