| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is phnM [C]
Identifier: 119947264
GI number: 119947264
Start: 4475218
End: 4476168
Strand: Reverse
Name: phnM [C]
Synonym: Ping_3662
Alternate gene names: 119947264
Gene position: 4476168-4475218 (Counterclockwise)
Preceding gene: 119947268
Following gene: 119947261
Centisome position: 98.17
GC content: 39.85
Gene sequence:
>951_bases ATGAAGTTAAACCCAAGTAGTCCAAATGAGCCATTTACTGCTTTCATGCACTTAAGTGATAAGCGTTCAGCTATTGCTGA TGATTTTAATGAGATTGAAATTAATTTTATTGCGCAAGTTGTTAAGGATGTTAGCGAACCTATGATACAGGCTCGATTTG CCGATTTACTTTGGTTGTTGGTTACTACCGTATACCATGCTCTCTCTTTTGCAAATGAAGAATTGGGCGTACGTAACAAC CAGTTTGCGAAAAAAATTGCGCAAGCTGTTCATCAATTCCAACCGCATGCCTTAGTCTATAACCGTGTCCATTGTCGTTA TGAAATTACAGATCCAACCGGTCTACCTATCTTAATAGACTTAATGAAAAACCAAGCCATGCAGCTTGTCTCATTAATGG ATCACACACCAGGGCAAGGGCAGTTTAAAGATTTAGCTTCCTATAAAGCCTATTTTGGTAAAAGTTATAAAAAGTCTGAC CAAGAGTTAGATAAGATGATTGCCAATAAAAAACAACAAGCAGAAGGGGCCATAGGGCGTGTTGAACTGCTGGTGAAAAC CGCTAATGAACAAGGCATTGCAGCGGCTTTTTTTACCAGTATCTATTCGCTATCTGATAAAGCAATCAGCCAGCAGGTAG ATAGCTTTTCTGCTTGGGTAACCTTATGCCTTTATCGGAAAAAACATTGTGAAACTATTATTCCCGCCGTTCGACCGCAT TTAGCTGTGTGGTTAGCAGGCAGCCTGTTTATTGGAACCGCCTATGCGTTAGTGATACTCGCCATGCAAACTCTGCCCAC CGCTTATGTGCTATCCATGACCAATATTGGCATTTTATTAGCCGTGGTTTTATCTATGCTGTTTTTTAAAGATCGCGTTC ATCTCAAGCAAAAAATAGTTGCGACACTATTTATTACCAGTGGCTTGTTGATTTTAGGGATTTTTGGTTAA
Upstream 100 bases:
>100_bases CTCTATCAGTTCCGATTTCAGGTCTTATGCTAATCAAGTTAGAGAAGATAAAAATGAGCCTCTAGCTAATGCATTAGATT TATGTGCATGTATTTTATCG
Downstream 100 bases:
>100_bases TCTAAAGTAGATAGATTAGCTTTTTGAAGTGGTGATTAAAATAGGCTGGGGTTGATGGCTAATTAGTTCATCTTTTGAAT ATTTATAGATAGGCAAGCGC
Product: metal-dependent hydrolase involved in phosphonate metabolism-like protein
Products: NA
Alternate protein names: Amidohydrolase; Phosphonate Metabolism Protein; C-P Lyase Component; AmidohydrolaseAmidohydrolase-Like; Amidohydrolase Family Protein; Amidohydrolase-Like; Amidohydrolase-Like Protein
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MKLNPSSPNEPFTAFMHLSDKRSAIADDFNEIEINFIAQVVKDVSEPMIQARFADLLWLLVTTVYHALSFANEELGVRNN QFAKKIAQAVHQFQPHALVYNRVHCRYEITDPTGLPILIDLMKNQAMQLVSLMDHTPGQGQFKDLASYKAYFGKSYKKSD QELDKMIANKKQQAEGAIGRVELLVKTANEQGIAAAFFTSIYSLSDKAISQQVDSFSAWVTLCLYRKKHCETIIPAVRPH LAVWLAGSLFIGTAYALVILAMQTLPTAYVLSMTNIGILLAVVLSMLFFKDRVHLKQKIVATLFITSGLLILGIFG
Sequences:
>Translated_316_residues MKLNPSSPNEPFTAFMHLSDKRSAIADDFNEIEINFIAQVVKDVSEPMIQARFADLLWLLVTTVYHALSFANEELGVRNN QFAKKIAQAVHQFQPHALVYNRVHCRYEITDPTGLPILIDLMKNQAMQLVSLMDHTPGQGQFKDLASYKAYFGKSYKKSD QELDKMIANKKQQAEGAIGRVELLVKTANEQGIAAAFFTSIYSLSDKAISQQVDSFSAWVTLCLYRKKHCETIIPAVRPH LAVWLAGSLFIGTAYALVILAMQTLPTAYVLSMTNIGILLAVVLSMLFFKDRVHLKQKIVATLFITSGLLILGIFG >Mature_316_residues MKLNPSSPNEPFTAFMHLSDKRSAIADDFNEIEINFIAQVVKDVSEPMIQARFADLLWLLVTTVYHALSFANEELGVRNN QFAKKIAQAVHQFQPHALVYNRVHCRYEITDPTGLPILIDLMKNQAMQLVSLMDHTPGQGQFKDLASYKAYFGKSYKKSD QELDKMIANKKQQAEGAIGRVELLVKTANEQGIAAAFFTSIYSLSDKAISQQVDSFSAWVTLCLYRKKHCETIIPAVRPH LAVWLAGSLFIGTAYALVILAMQTLPTAYVLSMTNIGILLAVVLSMLFFKDRVHLKQKIVATLFITSGLLILGIFG
Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]
COG id: COG3454
COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35303; Mature: 35303
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNPSSPNEPFTAFMHLSDKRSAIADDFNEIEINFIAQVVKDVSEPMIQARFADLLWLL CCCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTTVYHALSFANEELGVRNNQFAKKIAQAVHQFQPHALVYNRVHCRYEITDPTGLPILID HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHCCCCHHHHHCEEEEEEECCCCCCHHHHH LMKNQAMQLVSLMDHTPGQGQFKDLASYKAYFGKSYKKSDQELDKMIANKKQQAEGAIGR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCHHH VELLVKTANEQGIAAAFFTSIYSLSDKAISQQVDSFSAWVTLCLYRKKHCETIIPAVRPH HHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVWLAGSLFIGTAYALVILAMQTLPTAYVLSMTNIGILLAVVLSMLFFKDRVHLKQKIV HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLFITSGLLILGIFG HHHHHHHHHHHHEECC >Mature Secondary Structure MKLNPSSPNEPFTAFMHLSDKRSAIADDFNEIEINFIAQVVKDVSEPMIQARFADLLWLL CCCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTTVYHALSFANEELGVRNNQFAKKIAQAVHQFQPHALVYNRVHCRYEITDPTGLPILID HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHCCCCHHHHHCEEEEEEECCCCCCHHHHH LMKNQAMQLVSLMDHTPGQGQFKDLASYKAYFGKSYKKSDQELDKMIANKKQQAEGAIGR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCHHH VELLVKTANEQGIAAAFFTSIYSLSDKAISQQVDSFSAWVTLCLYRKKHCETIIPAVRPH HHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVWLAGSLFIGTAYALVILAMQTLPTAYVLSMTNIGILLAVVLSMLFFKDRVHLKQKIV HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLFITSGLLILGIFG HHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA