Click here to switch to the map view.

The map label for this gene is 119947261

Identifier: 119947261

GI number: 119947261

Start: 4471278

End: 4472933

Strand: Reverse

Name: 119947261

Synonym: Ping_3659

Alternate gene names: NA

Gene position: 4472933-4471278 (Counterclockwise)

Preceding gene: 119947264

Following gene: 119947260

Centisome position: 98.1

GC content: 43.66

Gene sequence:

>1656_bases
ATGTCTCTAAATAAAAAAAATTGGGCAACAAAAAAAGCATTAAAAGTGGAACGAATCAACTCAGTGCAGCATATTAGCCA
TGGCAAAGTGATTCCTACAGAGCAAATGGTCGCTGCATTAGAATGTTTACTACATATAGGGGATCGGGTGATCCTAGAAG
GTAATAATCAAAAACAGGCAGATTTTCTGGCGCGTGCGTTAGAAAAAGTAGATAGCACTAAAGTAAATAATCTCCATATG
ATTATGCCCAGTGTTAGCTTACCTGAACATATGAATATTTTTGAAAAAGGCATTGCCTCTAAATTGGATTTTGCCTTTGC
CGGACAGCAAAGTGTACGCATTTCACAAATGTTAGAAGATGGAATTTTAGAAATTGGTGCGGTACATACCTATGTGGAAT
TGTATGCGCGTTTATATTGTAATCTGATCCCGAATGTGGCCTTAGTGTGCGGCTTTAAAGCGGATAAACACGGTAATCTT
TTCTGCGGAGGGTCAACAGAAGATACTCCGAGTCTGGTTGAAGCACCGGCTTTTAAAGATGGGATAGTGATTGCGCAAGT
AAATGAGATTGTGGATGAAACCACGGATTTACCGCGTGTGGATATCCCCGGTGATTGGATTGATTTTATTGTTCAAGCAG
ACAAACCTTTTTATATGGAACCTTTATTTACGCGCGACCCGCGCCTCATTAAAGACACTCATATATTAATGGGGATGATG
GCAATTAAAGGCATCTATGCAAAACATAAAGTGCAAACGCTTAATCATGGTATTGGTTTTAATACCGCCGCTATCGAATT
ATTGCTACCAACCTATGGGGAATCACTCGGTCTTAAGGGAAAAATTTGTAAGCATTGGCTGTTAAATCCTCATCCGACCT
TAATTCCGGCCATTGAGTCGGGATGGGTGGAAAGTGTCCATTCTTTTGGGGGTGAATTAGGCATGGAAGAGTACATCAGA
GAGCGTTCCGATGTGTTTTTCACCGGGCCAGACGGCTCGATGCGTTCTAACCGCACTATGTGTCAGCTGGCCGGGCAGTA
TGCTGCCGATATGTTTATTGGTGCCACCCTGCAAATGGACGCCGAAGGAAACTCTTCGACAGTGACTCGCGGCAGGTTAT
CGGGTTTTGGTGGTGCCCCCAATATGGGACACGATCCGCGTGGACGCCGCCATAGTTCAGAAGCTTGGTTAGATCTGATC
ACAGACAAAAAAAGTGATGTTGTGAAAGGGCGAAAGCTGGTTGTACAGATGGTTGAAACCTTTCAAAGTGGCGATACACC
AACTTTTGTTGAAAAATTAGATGCTGTTGAGGTAGCTCACAAAACAGGCATGCCTATCGCACCTATTATGATTTATGGCG
ATGACGTAACCCATGTTTTAACCGAAGAAGGCATTGCTTATCTGTATATGGCTGAGGATTTGGCCGAGCGTAAACTATTA
ATTGCATCGGTTGCGGGTGTAACTGAGCTTGGTAAACAAGTCAGCACCGAGCAAGTTCAGTTATTTAGAGAGCAAGGTAA
AGTGGCAACGCCTGAAGATTTAGGGATTAGGCGCTCGGAGGCGAATCGCAGCTTGCTTGCGGCTAAAAATGTCAGTGAAT
TGGTTCAATGGTCCGAAGGACTGTATCAGCCACCTGCTAAATACAGAAGTTGGTGA

Upstream 100 bases:

>100_bases
ATTTATTGTGTTCAGGTAAGCAAAGAAGCGTTTCATTTGCCTAAACCTGAATTTTAGTCATCTTGATTGAGTAACACTTT
TTATTATAATAGGTAACTAT

Downstream 100 bases:

>100_bases
TTATGGATAATTTATTAATAGATAACGACGCGACTTGGACTTGTTTGAAAATAGCTCAATTAGCGCAATGGGCGCTGCAG
GAAGAAGTTCTTCTGACGCC

Product: malonate decarboxylase alpha subunit

Products: NA

Alternate protein names: Alpha Subunit Of Malonate Decarboxylase; Malonate Decarboxylase Subunit Alpha; Malonate Decarboxylase Alpha-Subunit; Subunit Alpha Of Malonate Decarboxylase

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MSLNKKNWATKKALKVERINSVQHISHGKVIPTEQMVAALECLLHIGDRVILEGNNQKQADFLARALEKVDSTKVNNLHM
IMPSVSLPEHMNIFEKGIASKLDFAFAGQQSVRISQMLEDGILEIGAVHTYVELYARLYCNLIPNVALVCGFKADKHGNL
FCGGSTEDTPSLVEAPAFKDGIVIAQVNEIVDETTDLPRVDIPGDWIDFIVQADKPFYMEPLFTRDPRLIKDTHILMGMM
AIKGIYAKHKVQTLNHGIGFNTAAIELLLPTYGESLGLKGKICKHWLLNPHPTLIPAIESGWVESVHSFGGELGMEEYIR
ERSDVFFTGPDGSMRSNRTMCQLAGQYAADMFIGATLQMDAEGNSSTVTRGRLSGFGGAPNMGHDPRGRRHSSEAWLDLI
TDKKSDVVKGRKLVVQMVETFQSGDTPTFVEKLDAVEVAHKTGMPIAPIMIYGDDVTHVLTEEGIAYLYMAEDLAERKLL
IASVAGVTELGKQVSTEQVQLFREQGKVATPEDLGIRRSEANRSLLAAKNVSELVQWSEGLYQPPAKYRSW

Sequences:

>Translated_551_residues
MSLNKKNWATKKALKVERINSVQHISHGKVIPTEQMVAALECLLHIGDRVILEGNNQKQADFLARALEKVDSTKVNNLHM
IMPSVSLPEHMNIFEKGIASKLDFAFAGQQSVRISQMLEDGILEIGAVHTYVELYARLYCNLIPNVALVCGFKADKHGNL
FCGGSTEDTPSLVEAPAFKDGIVIAQVNEIVDETTDLPRVDIPGDWIDFIVQADKPFYMEPLFTRDPRLIKDTHILMGMM
AIKGIYAKHKVQTLNHGIGFNTAAIELLLPTYGESLGLKGKICKHWLLNPHPTLIPAIESGWVESVHSFGGELGMEEYIR
ERSDVFFTGPDGSMRSNRTMCQLAGQYAADMFIGATLQMDAEGNSSTVTRGRLSGFGGAPNMGHDPRGRRHSSEAWLDLI
TDKKSDVVKGRKLVVQMVETFQSGDTPTFVEKLDAVEVAHKTGMPIAPIMIYGDDVTHVLTEEGIAYLYMAEDLAERKLL
IASVAGVTELGKQVSTEQVQLFREQGKVATPEDLGIRRSEANRSLLAAKNVSELVQWSEGLYQPPAKYRSW
>Mature_550_residues
SLNKKNWATKKALKVERINSVQHISHGKVIPTEQMVAALECLLHIGDRVILEGNNQKQADFLARALEKVDSTKVNNLHMI
MPSVSLPEHMNIFEKGIASKLDFAFAGQQSVRISQMLEDGILEIGAVHTYVELYARLYCNLIPNVALVCGFKADKHGNLF
CGGSTEDTPSLVEAPAFKDGIVIAQVNEIVDETTDLPRVDIPGDWIDFIVQADKPFYMEPLFTRDPRLIKDTHILMGMMA
IKGIYAKHKVQTLNHGIGFNTAAIELLLPTYGESLGLKGKICKHWLLNPHPTLIPAIESGWVESVHSFGGELGMEEYIRE
RSDVFFTGPDGSMRSNRTMCQLAGQYAADMFIGATLQMDAEGNSSTVTRGRLSGFGGAPNMGHDPRGRRHSSEAWLDLIT
DKKSDVVKGRKLVVQMVETFQSGDTPTFVEKLDAVEVAHKTGMPIAPIMIYGDDVTHVLTEEGIAYLYMAEDLAERKLLI
ASVAGVTELGKQVSTEQVQLFREQGKVATPEDLGIRRSEANRSLLAAKNVSELVQWSEGLYQPPAKYRSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60949; Mature: 60818

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNKKNWATKKALKVERINSVQHISHGKVIPTEQMVAALECLLHIGDRVILEGNNQKQA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHH
DFLARALEKVDSTKVNNLHMIMPSVSLPEHMNIFEKGIASKLDFAFAGQQSVRISQMLED
HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHH
GILEIGAVHTYVELYARLYCNLIPNVALVCGFKADKHGNLFCGGSTEDTPSLVEAPAFKD
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCCCCHHHCCCCCCC
GIVIAQVNEIVDETTDLPRVDIPGDWIDFIVQADKPFYMEPLFTRDPRLIKDTHILMGMM
CEEEEEHHHHHHHHCCCCCCCCCCHHHHHHEECCCCCEECCCCCCCCCHHHHHHHHHHHH
AIKGIYAKHKVQTLNHGIGFNTAAIELLLPTYGESLGLKGKICKHWLLNPHPTLIPAIES
HHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCCHHHHHHHCCCCCCCEECCHHH
GWVESVHSFGGELGMEEYIRERSDVFFTGPDGSMRSNRTMCQLAGQYAADMFIGATLQMD
HHHHHHHHCCCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC
AEGNSSTVTRGRLSGFGGAPNMGHDPRGRRHSSEAWLDLITDKKSDVVKGRKLVVQMVET
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FQSGDTPTFVEKLDAVEVAHKTGMPIAPIMIYGDDVTHVLTEEGIAYLYMAEDLAERKLL
HHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCEEEEEEHHHHHHHHHH
IASVAGVTELGKQVSTEQVQLFREQGKVATPEDLGIRRSEANRSLLAAKNVSELVQWSEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHC
LYQPPAKYRSW
CCCCCHHHCCC
>Mature Secondary Structure 
SLNKKNWATKKALKVERINSVQHISHGKVIPTEQMVAALECLLHIGDRVILEGNNQKQA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHH
DFLARALEKVDSTKVNNLHMIMPSVSLPEHMNIFEKGIASKLDFAFAGQQSVRISQMLED
HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHH
GILEIGAVHTYVELYARLYCNLIPNVALVCGFKADKHGNLFCGGSTEDTPSLVEAPAFKD
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCCCCHHHCCCCCCC
GIVIAQVNEIVDETTDLPRVDIPGDWIDFIVQADKPFYMEPLFTRDPRLIKDTHILMGMM
CEEEEEHHHHHHHHCCCCCCCCCCHHHHHHEECCCCCEECCCCCCCCCHHHHHHHHHHHH
AIKGIYAKHKVQTLNHGIGFNTAAIELLLPTYGESLGLKGKICKHWLLNPHPTLIPAIES
HHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCCHHHHHHHCCCCCCCEECCHHH
GWVESVHSFGGELGMEEYIRERSDVFFTGPDGSMRSNRTMCQLAGQYAADMFIGATLQMD
HHHHHHHHCCCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC
AEGNSSTVTRGRLSGFGGAPNMGHDPRGRRHSSEAWLDLITDKKSDVVKGRKLVVQMVET
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FQSGDTPTFVEKLDAVEVAHKTGMPIAPIMIYGDDVTHVLTEEGIAYLYMAEDLAERKLL
HHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCEEEEEEHHHHHHHHHH
IASVAGVTELGKQVSTEQVQLFREQGKVATPEDLGIRRSEANRSLLAAKNVSELVQWSEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHC
LYQPPAKYRSW
CCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA