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The map label for this gene is yicC [C]

Identifier: 119947254

GI number: 119947254

Start: 4464703

End: 4465566

Strand: Direct

Name: yicC [C]

Synonym: Ping_3652

Alternate gene names: 119947254

Gene position: 4464703-4465566 (Clockwise)

Preceding gene: 119947252

Following gene: 119947255

Centisome position: 97.92

GC content: 44.79

Gene sequence:

>864_bases
ATGATCTACAGTATGACAGCATTTGCGCGCAAACAATTCAAAGGTGATTGGGGCACTGCAGTGTGGGAGATTCGCTCAGT
TAACCAGCGTTATTTAGAGAGCTATTTTCGTCTTCCTGAGCAGTTTCGCGGTCTTGAAGTTAACTTAAAAGATATTTTCC
GCAAACGAGTACAACGCGGGAAGATCGAATGTAACCTGCGTTTTGAAGCAAGCAGCAGCAATGACAATGCATTAAGCATG
AATCAGGAATTAGCCGCGCAAGTGATTCAAAATACGCAGTGGATACTCGATAAAGCCGGCAGCGGCACCTTTAACGCCAT
TGATGTTCTAAACTGGCCTGGCGTAATGCAGACACCTGAGCAGGATCTGGATGCCGTCACCGTTGAGCTAATGGTAGGTT
TTGAACAGACACTTAATGAATTCATTGATGCACGTGCCGCTGAAGGCACCAACCTGGCGGCATTTATAGAGCAGCGTTTA
ACCGCTATCGGCGAACAGGCAAATAAAGTACGTTCATTTATGCCGGAAGTGCAGGTATGGCAGAAAGCACGTATTCTTAA
AAAATTCGAAGATGCCAAGGTGGAATTAGACAGTACGCGTGTTGAACAAGAACTCGTGATACTGGCACAAAAAACCGATG
TGGCAGAAGAGCTGGATCGTTTAGATTCACATATTTCAGAAAGCCGTAAGGTCTTAAAAAAAGGTGGCCCAGTAGGGCGT
CGTTTGGACTTTATGATGCAGGAATTTAACCGTGAAGCAAATACCCTAGGCTCAAAAGTGATTAACAGTGAAATCACCGC
CGCAGCAGTAGAATGCAAAGTATTAATTGAACAAATGCGCGAGCAGGTGCAGAACATAGAATAA

Upstream 100 bases:

>100_bases
CGGTCATCCCCCCAAGCTTAAATAACCCTGCCAACAGGTTATCGTAGCATCTTTACGGATCACTCAGTTATACTGTTTAT
TCAAATTCAGGGAGGTAATT

Downstream 100 bases:

>100_bases
TGTTTTAGCCGATTTCAGGTTGTTAGATATCTTAATATAAGCCCCGTATATCGGGGCTTTGTTGTTTTTATGGGATTCCA
GTGTATTACTTGTTTAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIYSMTAFARKQFKGDWGTAVWEIRSVNQRYLESYFRLPEQFRGLEVNLKDIFRKRVQRGKIECNLRFEASSSNDNALSM
NQELAAQVIQNTQWILDKAGSGTFNAIDVLNWPGVMQTPEQDLDAVTVELMVGFEQTLNEFIDARAAEGTNLAAFIEQRL
TAIGEQANKVRSFMPEVQVWQKARILKKFEDAKVELDSTRVEQELVILAQKTDVAEELDRLDSHISESRKVLKKGGPVGR
RLDFMMQEFNREANTLGSKVINSEITAAAVECKVLIEQMREQVQNIE

Sequences:

>Translated_287_residues
MIYSMTAFARKQFKGDWGTAVWEIRSVNQRYLESYFRLPEQFRGLEVNLKDIFRKRVQRGKIECNLRFEASSSNDNALSM
NQELAAQVIQNTQWILDKAGSGTFNAIDVLNWPGVMQTPEQDLDAVTVELMVGFEQTLNEFIDARAAEGTNLAAFIEQRL
TAIGEQANKVRSFMPEVQVWQKARILKKFEDAKVELDSTRVEQELVILAQKTDVAEELDRLDSHISESRKVLKKGGPVGR
RLDFMMQEFNREANTLGSKVINSEITAAAVECKVLIEQMREQVQNIE
>Mature_287_residues
MIYSMTAFARKQFKGDWGTAVWEIRSVNQRYLESYFRLPEQFRGLEVNLKDIFRKRVQRGKIECNLRFEASSSNDNALSM
NQELAAQVIQNTQWILDKAGSGTFNAIDVLNWPGVMQTPEQDLDAVTVELMVGFEQTLNEFIDARAAEGTNLAAFIEQRL
TAIGEQANKVRSFMPEVQVWQKARILKKFEDAKVELDSTRVEQELVILAQKTDVAEELDRLDSHISESRKVLKKGGPVGR
RLDFMMQEFNREANTLGSKVINSEITAAAVECKVLIEQMREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=56.4459930313589, Blast_Score=339, Evalue=1e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32800; Mature: 32800

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSMTAFARKQFKGDWGTAVWEIRSVNQRYLESYFRLPEQFRGLEVNLKDIFRKRVQRG
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHCC
KIECNLRFEASSSNDNALSMNQELAAQVIQNTQWILDKAGSGTFNAIDVLNWPGVMQTPE
CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC
QDLDAVTVELMVGFEQTLNEFIDARAAEGTNLAAFIEQRLTAIGEQANKVRSFMPEVQVW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKARILKKFEDAKVELDSTRVEQELVILAQKTDVAEELDRLDSHISESRKVLKKGGPVGR
HHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
RLDFMMQEFNREANTLGSKVINSEITAAAVECKVLIEQMREQVQNIE
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIYSMTAFARKQFKGDWGTAVWEIRSVNQRYLESYFRLPEQFRGLEVNLKDIFRKRVQRG
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHCC
KIECNLRFEASSSNDNALSMNQELAAQVIQNTQWILDKAGSGTFNAIDVLNWPGVMQTPE
CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC
QDLDAVTVELMVGFEQTLNEFIDARAAEGTNLAAFIEQRLTAIGEQANKVRSFMPEVQVW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKARILKKFEDAKVELDSTRVEQELVILAQKTDVAEELDRLDSHISESRKVLKKGGPVGR
HHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
RLDFMMQEFNREANTLGSKVINSEITAAAVECKVLIEQMREQVQNIE
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]