Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119947252

Identifier: 119947252

GI number: 119947252

Start: 4463533

End: 4463988

Strand: Direct

Name: 119947252

Synonym: Ping_3650

Alternate gene names: NA

Gene position: 4463533-4463988 (Clockwise)

Preceding gene: 119947248

Following gene: 119947254

Centisome position: 97.89

GC content: 40.35

Gene sequence:

>456_bases
ATGAGTATTGAATTAGACCAAAATCTACAAAAAGACTGTTATAAATTAGCTGAGAGTGAGGATTATTTATGGTTATTACT
CAATAACCGCTATTTCCTATGGATGATTATTGTCCCTAATACCGCCCAGACGGAGCTCTACAGGTTAACGGAACAAGAGC
AGCAAAAACTGACTCAACAAAGCAATATGATCAGTGAATTTATCACCCAAAACTTTGCTTGTGATAAATTAAATGTGGCC
AGTATCGGCAATATAGTCGCGCAAATTCATCTTCATATCATTGCCCGTACCACGACAGATCTATGCTGGCCCGGGGTTGT
TTGGGGTACTGAACATAAAGCGCCGTATCCGATTGATGCCGTATTAGAGATTCAGACAAAGCTGCAACAATTTTGTCTGG
ACAAAAATATCACCGGCTATCACTTTAGCGCGCCGGAGATTAAAGCCGTTCAATAA

Upstream 100 bases:

>100_bases
ATCAACGGGATCCGGGTATACTTGAAAAATAATAAGGCTTATAAATTAAGCTGGCACTAATTTGACAACAATCGATGAGA
AAATGTTCAAGAGGAAGAAA

Downstream 100 bases:

>100_bases
AATCTAAATCTGTTTTTGTTCCCTGTAAAAAATAGAGTGGCGGTGCATATTTGCGAGCCATTTTTATTGCCTGTTCATTG
CTTAAGTGGCTTTTAATACA

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Histidine Triad Domain Protein; HIT Hydrolase; Histidine Triad; Pectate Lyase/Amb Allergen; Diadenosine Tetraphosphate Hydrolase; HIT Family Protein; Diadenosine Tetraphosphate Hydrolase-Like Protein

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSIELDQNLQKDCYKLAESEDYLWLLLNNRYFLWMIIVPNTAQTELYRLTEQEQQKLTQQSNMISEFITQNFACDKLNVA
SIGNIVAQIHLHIIARTTTDLCWPGVVWGTEHKAPYPIDAVLEIQTKLQQFCLDKNITGYHFSAPEIKAVQ

Sequences:

>Translated_151_residues
MSIELDQNLQKDCYKLAESEDYLWLLLNNRYFLWMIIVPNTAQTELYRLTEQEQQKLTQQSNMISEFITQNFACDKLNVA
SIGNIVAQIHLHIIARTTTDLCWPGVVWGTEHKAPYPIDAVLEIQTKLQQFCLDKNITGYHFSAPEIKAVQ
>Mature_150_residues
SIELDQNLQKDCYKLAESEDYLWLLLNNRYFLWMIIVPNTAQTELYRLTEQEQQKLTQQSNMISEFITQNFACDKLNVAS
IGNIVAQIHLHIIARTTTDLCWPGVVWGTEHKAPYPIDAVLEIQTKLQQFCLDKNITGYHFSAPEIKAVQ

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17505; Mature: 17374

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIELDQNLQKDCYKLAESEDYLWLLLNNRYFLWMIIVPNTAQTELYRLTEQEQQKLTQQ
CCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
SNMISEFITQNFACDKLNVASIGNIVAQIHLHIIARTTTDLCWPGVVWGTEHKAPYPIDA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCEECCCCCCCCCHHH
VLEIQTKLQQFCLDKNITGYHFSAPEIKAVQ
HHHHHHHHHHHHHCCCCCCEEECCCCEEECC
>Mature Secondary Structure 
SIELDQNLQKDCYKLAESEDYLWLLLNNRYFLWMIIVPNTAQTELYRLTEQEQQKLTQQ
CCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
SNMISEFITQNFACDKLNVASIGNIVAQIHLHIIARTTTDLCWPGVVWGTEHKAPYPIDA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCEECCCCCCCCCHHH
VLEIQTKLQQFCLDKNITGYHFSAPEIKAVQ
HHHHHHHHHHHHHCCCCCCEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA