| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119947201
Identifier: 119947201
GI number: 119947201
Start: 4412903
End: 4413313
Strand: Direct
Name: 119947201
Synonym: Ping_3599
Alternate gene names: NA
Gene position: 4412903-4413313 (Clockwise)
Preceding gene: 119947200
Following gene: 119947202
Centisome position: 96.78
GC content: 34.31
Gene sequence:
>411_bases ATGACTAAAAAAGAAATGCTGACAATTTTTCACCGTACTATTGTCAGTGATTTTCAGGTTGCCTGCGCATTAACTGATTT GCTCGAATCAGTCAGAGACAGCTGTCTTAAAATGGACGGTGAGAGTTTAAGTTGTACCAATGATAAAATCATTGCTTCTA TCGATGCCTTAAGAAAAAACCATTTAAAGCGCTTGAAAATAGTTAACGCATTTGGATTTTCACAAAAGATAGATAAATTT GTTGCCTCTCTCCCCCCCAAAATAAATACCCAGTTATCAGCTGAATTGGAAAAACTGTTTAATATATTACGAAAATGCGA ACAAAAAAATAACAATAATGGTCAGCTGTTTGCCGGACAGCATGAACTGATCTCCCAACTCTCAAAACAATCAATAAACA TTAAAATTTAA
Upstream 100 bases:
>100_bases AAACAAGTACAGCTCGCGATCGCTAACGGCGAGTTGAAAATAGATTTGAACAGCCTTGCCCGGGCTATTATGAATGAACA CCTGTTGGATAATACAAGCA
Downstream 100 bases:
>100_bases ATACTGATTAAATACTGCAACCTTGCGAGATGATGGTGTATTTATGGCAATCAGCACACTGCCAGATCCACCTTCCAGTT AACTTACTAGGTTAGATATT
Product: ATPases involved in pili biogenesis, PilT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MTKKEMLTIFHRTIVSDFQVACALTDLLESVRDSCLKMDGESLSCTNDKIIASIDALRKNHLKRLKIVNAFGFSQKIDKF VASLPPKINTQLSAELEKLFNILRKCEQKNNNNGQLFAGQHELISQLSKQSINIKI
Sequences:
>Translated_136_residues MTKKEMLTIFHRTIVSDFQVACALTDLLESVRDSCLKMDGESLSCTNDKIIASIDALRKNHLKRLKIVNAFGFSQKIDKF VASLPPKINTQLSAELEKLFNILRKCEQKNNNNGQLFAGQHELISQLSKQSINIKI >Mature_135_residues TKKEMLTIFHRTIVSDFQVACALTDLLESVRDSCLKMDGESLSCTNDKIIASIDALRKNHLKRLKIVNAFGFSQKIDKFV ASLPPKINTQLSAELEKLFNILRKCEQKNNNNGQLFAGQHELISQLSKQSINIKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15378; Mature: 15247
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKEMLTIFHRTIVSDFQVACALTDLLESVRDSCLKMDGESLSCTNDKIIASIDALRKN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH HLKRLKIVNAFGFSQKIDKFVASLPPKINTQLSAELEKLFNILRKCEQKNNNNGQLFAGQ HHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECH HELISQLSKQSINIKI HHHHHHHHHHCCCCCC >Mature Secondary Structure TKKEMLTIFHRTIVSDFQVACALTDLLESVRDSCLKMDGESLSCTNDKIIASIDALRKN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH HLKRLKIVNAFGFSQKIDKFVASLPPKINTQLSAELEKLFNILRKCEQKNNNNGQLFAGQ HHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECH HELISQLSKQSINIKI HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA